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PDB: 5677 results

4CLM
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BU of 4clm by Molmil
Structure of Salmonella typhi type I dehydroquinase irreversibly inhibited with a 1,3,4-trihydroxyciclohexane-1-carboxylic acid derivative
Descriptor: (1~{S},3~{S},4~{R},5~{R})-3-methyl-1,4,5-tris(hydroxyl)cyclohexane-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
Authors:Otero, J.M, Llamas-Saiz, A.L, Tizon, L, Maneiro, M, Lence, E, Poza, S, Lamb, H, Hawkins, A.R, Blanco, B, Sedes, A, Peon, A, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2014-01-15
Release date:2014-11-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Irreversible covalent modification of type I dehydroquinase with a stable Schiff base.
Org. Biomol. Chem., 13, 2015
1PJD
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BU of 1pjd by Molmil
Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers
Descriptor: Pheromone alpha factor receptor
Authors:Valentine, K.G, Liu, S.-F, Marassi, F.M, Veglia, G, Nevzorov, A.A, Opella, S.J, Ding, F.-X, Wang, S.-H, Arshava, B, Becker, J.M, Naider, F.
Deposit date:2003-06-02
Release date:2003-09-16
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers
Biopolymers, 59, 2001
2HDA
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BU of 2hda by Molmil
Yes SH3 domain
Descriptor: Proto-oncogene tyrosine-protein kinase Yes, SULFATE ION
Authors:Camara-Artigas, A, Luque, I, Ruiz-Sanz, J, Mateo, P.L, Martin-Garcia, J.M.
Deposit date:2006-06-20
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic structure of the SH3 domain of the human c-Yes tyrosine kinase: Loop flexibility and amyloid aggregation.
Febs Lett., 581, 2007
1PJ1
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BU of 1pj1 by Molmil
RIBONUCLEOTIDE REDUCTASE R2-D84E/W48F SOAKED WITH FERROUS IONS AT PH 5
Descriptor: FE (III) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
Authors:Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
Deposit date:2003-05-30
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
1PIZ
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BU of 1piz by Molmil
RIBONUCLEOTIDE REDUCTASE R2 D84E MUTANT SOAKED WITH FERROUS IONS AT NEUTRAL PH
Descriptor: FE (III) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
Authors:Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
Deposit date:2003-05-30
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
2HE4
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BU of 2he4 by Molmil
The crystal structure of the second PDZ domain of human NHERF-2 (SLC9A3R2) interacting with a mode 1 PDZ binding motif
Descriptor: 1,2-ETHANEDIOL, Na(+)/H(+) exchange regulatory cofactor NHE-RF2
Authors:Papagrigoriou, E, Elkins, J.M, Berridge, G, Gileady, O, Colebrook, S, Gileadi, C, Salah, E, Savitsky, P, Pantic, N, Gorrec, F, Bunkoczi, G, Weigelt, J, Arrowsmith, C, Sundstrom, M, Edwards, A, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2006-06-21
Release date:2006-07-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
4CNP
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BU of 4cnp by Molmil
Structure of the Salmonella typhi type I dehydroquinase inhibited by a 3-epiquinic acid derivative
Descriptor: (2S)-2-HYDROXY-3-EPIQUINIC ACID, 3-DEHYDROQUINATE DEHYDRATASE, CHLORIDE ION, ...
Authors:Otero, J.M, Llamas-Saiz, A.L, Maneiro, M, Peon, A, Lence, E, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2014-01-23
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Mechanistic Insight Into the Reaction Catalyzed by Type I Dehydroquinase
To be Published
3ISV
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BU of 3isv by Molmil
Crystal structure of glutamate racemase from Listeria monocytogenes in complex with acetate ion
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Majorek, K.A, Chruszcz, M, Skarina, T, Onopriyenko, O, Stam, J, Anderson, W.F, Savchenko, A, Bujnicki, J.M, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-27
Release date:2009-09-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of glutamate racemase from Listeria monocytogenes in complex with acetate ion
To be Published
1PIU
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BU of 1piu by Molmil
OXIDIZED RIBONUCLEOTIDE REDUCTASE R2-D84E MUTANT CONTAINING OXO-BRIDGED DIFERRIC CLUSTER
Descriptor: FE (III) ION, MERCURY (II) ION, OXYGEN ATOM, ...
Authors:Voegtli, W.C, Khidekel, N, Baldwin, J, Ley, B.A, Bollinger Jr, J.M, Rosenzweig, A.C.
Deposit date:2003-05-30
Release date:2003-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Ribonucleotide Reductase R2 Mutant that Accumulates a u-1,2-Peroxodiiron(III) Intermediate during Oxygen Activation
J.Am.Chem.Soc., 122, 2000
2GZV
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BU of 2gzv by Molmil
The cystal structure of the PDZ domain of human PICK1
Descriptor: PRKCA-binding protein
Authors:Debreczeni, J.E, Elkins, J.M, Yang, X, Berridge, G, Bray, J, Colebrook, S, Smee, C, Savitsky, P, Gileadi, O, Turnbull, A, von Delft, F, Doyle, D.A, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Structural Genomics Consortium (SGC)
Deposit date:2006-05-12
Release date:2006-07-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
3IST
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BU of 3ist by Molmil
Crystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acid
Descriptor: CHLORIDE ION, Glutamate racemase, SUCCINIC ACID
Authors:Majorek, K.A, Chruszcz, M, Skarina, T, Onopriyenko, O, Stam, J, Anderson, W.F, Savchenko, A, Bujnicki, J.M, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-27
Release date:2009-09-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of glutamate racemase from Listeria monocytogenes in complex with succinic acid
TO BE PUBLISHED
3IVR
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BU of 3ivr by Molmil
CRYSTAL STRUCTURE OF PUTATIVE long-chain-fatty-acid CoA ligase FROM Rhodopseudomonas palustris CGA009
Descriptor: CHLORIDE ION, GLYCEROL, Putative long-chain-fatty-acid CoA ligase
Authors:Patskovsky, Y, Toro, R, Foti, R, Dickey, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-01
Release date:2009-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURE OF PUTATIVE long-chain-fatty-acid CoA SYNTHASE FROM Rhodopseudomonas palustris CGA009
To be Published
1PQR
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BU of 1pqr by Molmil
Solution Conformation of alphaA-Conotoxin EIVA
Descriptor: Alpha-A-conotoxin EIVA
Authors:Chi, S.-W, Park, K.-H, Suk, J.-E, Olivera, B.M, McIntosh, J.M, Han, K.-H.
Deposit date:2003-06-18
Release date:2003-11-04
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Conformation of alphaA-conotoxin EIVA, a Potent Neuromuscular Nicotinic Acetylcholine Receptor Antagonist from Conus ermineus
J.Biol.Chem., 278, 2003
1PPQ
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BU of 1ppq by Molmil
NMR structure of 16th module of Immune Adherence Receptor, Cr1 (Cd35)
Descriptor: Complement receptor type 1
Authors:O'Leary, J.M, Bromek, K, Black, G.M, Uhrinova, S, Schmitz, C, Krych, M, Atkinson, J.P, Uhrin, D, Barlow, P.N.
Deposit date:2003-06-17
Release date:2004-05-04
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Backbone dynamics of complement control protein (CCP) modules reveals mobility in binding surfaces.
Protein Sci., 13, 2004
2INZ
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BU of 2inz by Molmil
Crystal Structure of Aldose Reductase complexed with 2-Hydroxyphenylacetic Acid
Descriptor: (2-HYDROXYPHENYL)ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Harrison, D.H.T, Pape, E, Carlson, E, Brownlee, J.M.
Deposit date:2006-10-09
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and thermodynamic studies of simple aldose reductase-inhibitor complexes.
Bioorg.Chem., 34, 2006
2IRM
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BU of 2irm by Molmil
Crystal structure of mitogen-activated protein kinase kinase kinase 7 interacting protein 1 from Anopheles gambiae
Descriptor: mitogen-activated protein kinase kinase kinase 7 interacting protein 1
Authors:Jin, X, Bonanno, J.B, Pelletier, L, Freeman, J.C, Wasserman, S, Sauder, J.M, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-10-15
Release date:2006-11-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural genomics of protein phosphatases.
J.STRUCT.FUNCT.GENOM., 8, 2007
3IYC
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BU of 3iyc by Molmil
Poliovirus late RNA-release intermediate
Descriptor: Capsid protein VP1, Capsid protein VP2, Genome polyprotein, ...
Authors:Levy, H.C, Bostina, M, Filman, D.J, Hogle, J.M.
Deposit date:2009-07-21
Release date:2010-03-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy.
J.Virol., 84, 2010
2IUL
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BU of 2iul by Molmil
Human tACE g13 mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ANGIOTENSIN-CONVERTING ENZYME, ...
Authors:Watermeyer, J.M, Sewell, B.T, Natesh, R, Corradi, H.R, Acharya, K.R, Sturrock, E.D.
Deposit date:2006-06-06
Release date:2006-10-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of Testis Ace Glycosylation Mutants and Evidence for Conserved Domain Movement.
Biochemistry, 45, 2006
2IEC
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BU of 2iec by Molmil
Crystal Structure of uncharacterized conserved archael protein from Methanopyrus kandleri
Descriptor: MAGNESIUM ION, Uncharacterized protein conserved in archaea
Authors:Bonanno, J.B, Ramagopal, U.A, Dickey, M, Bain, K.T, Powell, A, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-09-18
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal Structure of uncharacterized conserved archael protein from Methanopyrus kandleri
TO BE PUBLISHED
2J7O
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BU of 2j7o by Molmil
STRUCTURE OF THE RNAI POLYMERASE FROM NEUROSPORA CRASSA
Descriptor: MAGNESIUM ION, RNA DEPENDENT RNA POLYMERASE
Authors:Salgado, P.S, Koivunen, M.R.L, Makeyev, E.V, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2006-10-13
Release date:2006-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Structure of an Rnai Polymerase Links RNA Silencing and Transcription.
Plos Biol., 4, 2006
1RHT
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BU of 1rht by Molmil
24-MER RNA HAIRPIN COAT PROTEIN BINDING SITE FOR BACTERIOPHAGE R17 (NMR, MINIMIZED AVERAGE STRUCTURE)
Descriptor: RNA (5'-R(P*GP*GP*GP*AP*CP*UP*GP*AP*CP*GP*AP*UP*CP*AP*CP*GP*CP*AP*GP*UP*CP*UP*AP*U)-3')
Authors:Borer, P.N, Lin, Y, Wang, S, Roggenbuck, M.W, Gott, J.M, Uhlenbeck, O.C, Pelczer, I.
Deposit date:1995-03-03
Release date:1995-06-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Proton NMR and structural features of a 24-nucleotide RNA hairpin.
Biochemistry, 34, 1995
3J4A
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BU of 3j4a by Molmil
Structure of gp8 connector protein
Descriptor: Head-to-tail joining protein
Authors:Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
Deposit date:2013-07-09
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
3KAA
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BU of 3kaa by Molmil
Structure of Tim-3 in complex with phosphatidylserine
Descriptor: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, CALCIUM ION, Hepatitis A virus cellular receptor 2
Authors:Ballesteros, A, Santiago, C, Casasnovas, J.M.
Deposit date:2009-10-19
Release date:2010-01-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:T cell/transmembrane, Ig, and mucin-3 allelic variants differentially recognize phosphatidylserine and mediate phagocytosis of apoptotic cells.
J.Immunol., 184, 2010
2IJF
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BU of 2ijf by Molmil
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Fidelity Mutant 3Dpol G64S
Descriptor: RNA-directed RNA polymerase
Authors:Marcotte, L.L, Gohara, D.G, Filman, D.J, Hogle, J.M.
Deposit date:2006-09-29
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase.
J.Virol., 81, 2007
2IM9
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BU of 2im9 by Molmil
Crystal structure of protein LPG0564 from Legionella pneumophila str. Philadelphia 1, Pfam DUF1460
Descriptor: Hypothetical protein
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Powell, A, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-10-04
Release date:2006-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structure of hypothetical protein from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
TO BE PUBLISHED

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数据于2024-11-06公开中

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