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PDB: 5628 results

3JBD
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BU of 3jbd by Molmil
Complex of poliovirus with VHH PVSP6A
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3I4K
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BU of 3i4k by Molmil
Crystal structure of Muconate lactonizing enzyme from Corynebacterium glutamicum
Descriptor: ACETIC ACID, MAGNESIUM ION, Muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Muconate lactonizing enzyme from Corynebacterium glutamicum
To be Published
3I0V
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BU of 3i0v by Molmil
Bacillus cereus metallo-beta-lactamase: apo form
Descriptor: Beta-lactamase 2
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3PT7
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BU of 3pt7 by Molmil
Structure of HbII-III-Oxy from Lucina pectinata at pH 5.0
Descriptor: GLYCEROL, Hemoglobin II, Hemoglobin III, ...
Authors:Gavira, J.A, Ruiz-Martinez, C.R, Nieves-Marrero, C.A, Estremera-Andujar, R.A, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2010-12-02
Release date:2011-12-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:New Crystallographic Structure of HbII-III-Oxy and CN forms from Lucina pectinata.
To be Published
2HCB
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BU of 2hcb by Molmil
Structure of AMPPCP-bound DnaA from Aquifex aeolicus
Descriptor: Chromosomal replication initiator protein dnaA, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Erzberger, J.P, Mott, M.L, Berger, J.M.
Deposit date:2006-06-15
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling.
Nat.Struct.Mol.Biol., 13, 2006
3I47
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BU of 3i47 by Molmil
CRYSTAL STRUCTURE OF putative enoyl CoA hydratase/isomerase (crotonase) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Descriptor: Enoyl CoA hydratase/isomerase (Crotonase)
Authors:Malashkevich, V.N, Toro, R, Morano, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:CRYSTAL STRUCTURE OF putative enoyl CoA hydratase/isomerase (crotonase) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
To be Published
1S32
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BU of 1s32 by Molmil
Molecular Recognition of the Nucleosomal 'Supergroove'
Descriptor: 2-(2-CARBAMOYLMETHOXY-ETHOXY)-ACETAMIDE, 3-AMINO-(DIMETHYLPROPYLAMINE), 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID, ...
Authors:Edayathumangalam, R.S, Weyermann, P, Gottesfeld, J.M, Dervan, P.B, Luger, K.
Deposit date:2004-01-12
Release date:2004-05-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular Recognition of the Nucleosomal 'Supergroove'
Proc.Natl.Acad.Sci.USA, 101, 2004
4BIX
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BU of 4bix by Molmil
Crystal structure of CpxAHDC (monoclinic form 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SENSOR PROTEIN CPXA, ...
Authors:Mechaly, A.E, Sassoon, N, Betton, J.M, Alzari, P.M.
Deposit date:2013-04-13
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Segmental Helical Motions and Dynamical Asymmetry Modulate Histidine Kinase Autophosphorylation.
Plos Biol., 12, 2014
4BIZ
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BU of 4biz by Molmil
Crystal structure of CpxAHDC (orthorhombic form 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SENSOR PROTEIN CPXA, SULFATE ION
Authors:Mechaly, A.E, Sassoon, N, Betton, J.M, Alzari, P.M.
Deposit date:2013-04-13
Release date:2014-04-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structures of Cpxahdc
To be Published
1S48
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BU of 1s48 by Molmil
Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
Descriptor: RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-15
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
3HOS
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BU of 3hos by Molmil
Crystal structure of the mariner Mos1 paired end complex with Mg
Descriptor: MAGNESIUM ION, Mos1 NTS inverted repeat DNA, Mos1 TS inverted repeat DNA, ...
Authors:Richardson, J.M, Walkinshaw, M.D.
Deposit date:2009-06-03
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Molecular architecture of the Mos1 paired-end complex: the structural basis of DNA transposition in a eukaryote
Cell(Cambridge,Mass.), 138, 2009
3JAO
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BU of 3jao by Molmil
Ciliary microtubule doublet
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Maheshwari, A, Obbineni, J.M, Bui, K.H, Shibata, K, Toyoshima, Y.Y, Ishikawa, T.
Deposit date:2015-06-18
Release date:2015-08-05
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (23 Å)
Cite:alpha- and beta-Tubulin Lattice of the Axonemal Microtubule Doublet and Binding Proteins Revealed by Single Particle Cryo-Electron Microscopy and Tomography.
Structure, 23, 2015
3PZA
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BU of 3pza by Molmil
Fully Reduced (All-ferrous) Pyrococcus rubrerythrin after a 10 second exposure to peroxide.
Descriptor: FE (II) ION, HYDROGEN PEROXIDE, Rubrerythrin
Authors:Dillard, B.D, Demick, J.M, Adams, M.W, Lanzilotta, W.N.
Deposit date:2010-12-14
Release date:2011-06-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A cryo-crystallographic time course for peroxide reduction by rubrerythrin from Pyrococcus furiosus.
J.Biol.Inorg.Chem., 16, 2011
2HCO
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BU of 2hco by Molmil
THE STRUCTURE OF HUMAN CARBONMONOXY HAEMOGLOBIN AT 2.7 ANGSTROMS RESOLUTION
Descriptor: CARBON MONOXIDE, HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN), HEMOGLOBIN (CARBONMONOXY) (BETA CHAIN), ...
Authors:Baldwin, J.M.
Deposit date:1979-08-07
Release date:1979-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of human carbonmonoxy haemoglobin at 2.7 A resolution.
J.Mol.Biol., 136, 1980
4BBX
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BU of 4bbx by Molmil
Discovery of a potent, selective and orally active PDE10A inhibitor for the treatment of schizophrenia
Descriptor: 4-[3-[1-[(2S)-2-methoxypropyl]pyrazol-4-yl]-2-methyl-imidazo[1,2-a]pyrazin-8-yl]morpholine, CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC PHOSPHODIESTERASE 10A, ...
Authors:Bartolome-Nebreda, J.M, Conde-Ceide, S, Delgado, F, Martin, M.L, Martinez-Viturro, C.M, Pastor, J, Tong, H.M, Iturrino, L, Macdonald, G.J, Sanderson, W, Megens, A, Langlois, X, Somers, M, Vanhoof, G.
Deposit date:2012-09-28
Release date:2013-10-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of a Potent, Selective and Orally Active Pde10A Inhibitor for the Potential Treatment of Schizophrenia.
J.Med.Chem., 57, 2014
3JBC
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BU of 3jbc by Molmil
Complex of Poliovirus with VHH PVSP29F
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JBG
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BU of 3jbg by Molmil
Complex of poliovirus with VHH PVSS21E
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
Deposit date:2015-08-26
Release date:2016-01-27
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
1S4F
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BU of 1s4f by Molmil
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
Descriptor: RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-16
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S5S
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BU of 1s5s by Molmil
Porcine trypsin complexed with guanidine-3-propanol inhibitor
Descriptor: CALCIUM ION, GLYCEROL, GUANIDINE-3-PROPANOL, ...
Authors:Transue, T.R, Krahn, J.M, Gabel, S.A, DeRose, E.F, London, R.E.
Deposit date:2004-01-21
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
7LO8
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BU of 7lo8 by Molmil
NorA in complex with Fab36
Descriptor: Fab36 Heavy Chain, Fab36 Light Chain, Quinolone resistance protein NorA
Authors:Brawley, D.N, Sauer, D.B, Song, J.M, Koide, A, Koide, S, Traaseth, N.J, Wang, D.N.
Deposit date:2021-02-09
Release date:2022-04-20
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural basis for inhibition of the drug efflux pump NorA from Staphylococcus aureus.
Nat.Chem.Biol., 18, 2022
3HU5
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BU of 3hu5 by Molmil
CRYSTAL STRUCTURE OF isochorismatase family protein from Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Descriptor: Isochorismatase family protein
Authors:Malashkevich, V.N, Toro, R, Morano, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-12
Release date:2009-06-30
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:CRYSTAL STRUCTURE OF isochorismatase family protein from Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
To be Published
1SE8
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BU of 1se8 by Molmil
Structure of single-stranded DNA-binding protein (SSB) from D. radiodurans
Descriptor: Single-strand binding protein
Authors:Bernstein, D.A, Eggington, J.M, Killoran, M.P, Misic, A.M, Cox, M.M, Keck, J.L.
Deposit date:2004-02-16
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Deinococcus radiodurans single-stranded DNA-binding protein suggests a mechanism for coping with DNA damage.
Proc.Natl.Acad.Sci.USA, 101, 2004
7LO7
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BU of 7lo7 by Molmil
NorA in complex with Fab25
Descriptor: Fab25 Heavy Chain, Fab25 Light Chain, Quinolone resistance protein NorA
Authors:Brawley, D.N, Sauer, D.B, Song, J.M, Koide, A, Koide, S, Traaseth, N.J, Wang, D.N.
Deposit date:2021-02-09
Release date:2022-04-20
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Structural basis for inhibition of the drug efflux pump NorA from Staphylococcus aureus.
Nat.Chem.Biol., 18, 2022
5A8F
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BU of 5a8f by Molmil
Structure and genome release mechanism of human cardiovirus Saffold virus-3
Descriptor: GENOME POLYPHUMAN SAFFOLD VIRUS-3 VP3 PROTEIN, HUMAN SAFFOLD VIRUS-3 VP1, HUMAN SAFFOLD VIRUS-3 VP2
Authors:Mullapudi, E, Novacek, J, Palkova, L, Kulich, P, Lindberg, M, vanKuppeveld, F.J.M, Plevka, P.
Deposit date:2015-07-15
Release date:2016-06-08
Last modified:2019-10-30
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structure and Genome Release Mechanism of Human Cardiovirus Saffold Virus-3.
J.Virol., 90, 2016
4BLQ
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BU of 4blq by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI8
Descriptor: P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013

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