Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5628 件

3BD6
DownloadVisualize
BU of 3bd6 by Molmil
Glycogen Phosphorylase complex with 1(-D-ribofuranosyl) cyanuric acid
分子名称: 1-beta-D-ribofuranosyl-1,3,5-triazinane-2,4,6-trione, Glycogen phosphorylase, muscle form
著者Sovantzis, D.A, Hadjiloi, T, Hayes, J.M, Zographos, S.E, Chrysina, E.D, Oikonomakos, N.G.
登録日2007-11-14
公開日2008-11-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b
To be Published
2G9Z
DownloadVisualize
BU of 2g9z by Molmil
Thiamin pyrophosphokinase from Candida albicans
分子名称: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-(2-{[HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-I UM, CHLORIDE ION, MAGNESIUM ION, ...
著者Abergel, C, Santini, S, Monchois, V, Rousselle, T, Claverie, J.M, Bacterial targets at IGS-CNRS, France (BIGS)
登録日2006-03-07
公開日2006-04-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase.
Bmc Struct.Biol., 8, 2008
2GC1
DownloadVisualize
BU of 2gc1 by Molmil
The crystal structure of phosphoglucose isomerase from Pyrococcus furiosus in complex with sorbitol 6-phosphate and zinc
分子名称: D-SORBITOL-6-PHOSPHATE, Glucose-6-phosphate isomerase, ZINC ION
著者Berrisford, J.M, Rice, D.W, Baker, P.J.
登録日2006-03-13
公開日2006-04-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Evidence Supporting a cis-enediol-based Mechanism for Pyrococcus furiosus Phosphoglucose Isomerase
J.Mol.Biol., 358, 2006
1RZT
DownloadVisualize
BU of 1rzt by Molmil
Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA molecule
分子名称: 1,2-ETHANEDIOL, 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*G)-3', ...
著者Pedersen, L.C, Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Blanco, L, Kunkel, T.A.
登録日2003-12-29
公開日2004-03-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A structural solution for the DNA polymerase lambda-dependent repair of DNA gaps with minimal homology.
Mol.Cell, 13, 2004
3R4G
DownloadVisualize
BU of 3r4g by Molmil
Human Cyclophilin D Complexed with a Fragment
分子名称: 4-sulfamoylbenzoic acid, GLYCEROL, Peptidyl-prolyl cis-trans isomerase F, ...
著者Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
登録日2011-03-17
公開日2012-03-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
3MZN
DownloadVisualize
BU of 3mzn by Molmil
Crystal structure of probable glucarate dehydratase from chromohalobacter salexigens dsm 3043
分子名称: ACETATE ION, GLYCEROL, Glucarate dehydratase, ...
著者Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Gerlt, J.A, Almo, S.C, Burley, S.K, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-05-12
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of Glucarate Dehydratase from Chromohalobacter Salexigens
To be Published
3R57
DownloadVisualize
BU of 3r57 by Molmil
Human Cyclophilin D Complexed with a Fragment
分子名称: GLYCEROL, N-(3-aminophenyl)acetamide, Peptidyl-prolyl cis-trans isomerase F, ...
著者Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
登録日2011-03-18
公開日2012-03-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
1SC4
DownloadVisualize
BU of 1sc4 by Molmil
Crystal structure of the human caspase-1 C285A mutant after removal of malonate
分子名称: Interleukin-1 beta convertase
著者Romanowski, M.J, Scheer, J.M, O'Brien, T, McDowell, R.S.
登録日2004-02-11
公開日2004-08-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of a ligand-free and malonate-bound human caspase-1: implications for the mechanism of substrate binding.
Structure, 12, 2004
3N1F
DownloadVisualize
BU of 3n1f by Molmil
Crystal Structure of IhhN bound to CDOFn3
分子名称: CALCIUM ION, Cell adhesion molecule-related/down-regulated by oncogenes, Indian hedgehog protein, ...
著者Kavran, J.M, Leahy, D.J.
登録日2010-05-15
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3N28
DownloadVisualize
BU of 3n28 by Molmil
Crystal structure of probable phosphoserine phosphatase from vibrio cholerae, unliganded form
分子名称: Phosphoserine phosphatase, SULFATE ION
著者Patskovsky, Y, Ramagopal, U, Toro, R, Rutter, M, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-05-17
公開日2010-07-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Phosphoserine Phosphatase from Vibrio Cholerae
To be Published
3B2N
DownloadVisualize
BU of 3b2n by Molmil
Crystal structure of DNA-binding response regulator, LuxR family, from Staphylococcus aureus
分子名称: SODIUM ION, Uncharacterized protein Q99UF4
著者Malashkevich, V.N, Toro, R, Meyer, A.J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-10-18
公開日2007-10-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal structure of DNA-binding response regulator, LuxR family, from Staphylococcus aureus.
To be Published
4A8W
DownloadVisualize
BU of 4a8w by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
分子名称: 5'-D(*TP*TP*CP*GP*CP*GP*TP*AP*AP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
登録日2011-11-21
公開日2012-07-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
3N1M
DownloadVisualize
BU of 3n1m by Molmil
Crystal Structure of IhhN bound to BOCFn3
分子名称: Brother of CDO, CALCIUM ION, Indian hedgehog protein, ...
著者Kavran, J.M, Leahy, D.J.
登録日2010-05-15
公開日2010-06-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
J.Biol.Chem., 285, 2010
3HII
DownloadVisualize
BU of 3hii by Molmil
Crystal structure of human diamine oxidase in complex with the inhibitor pentamidine
分子名称: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Amiloride-sensitive amine oxidase, ...
著者McGrath, A.P, Guss, J.M.
登録日2009-05-20
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献Structure and inhibition of human diamine oxidase
Biochemistry, 48, 2009
3HL7
DownloadVisualize
BU of 3hl7 by Molmil
Crystal Structure of Human p38alpha complexed with SD-0006
分子名称: 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine, 2-{4-[5-(4-chlorophenyl)-4-pyrimidin-4-yl-1H-pyrazol-3-yl]piperidin-1-yl}-2-oxoethanol, Mitogen-activated protein kinase 14
著者Shieh, H.-S, Kurumbail, R.G, Stegeman, R.A, Williams, J.M.
登録日2009-05-26
公開日2009-07-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural bioinformatics-based prediction of exceptional selectivity of p38 MAP kinase inhibitor PH-797804.
Biochemistry, 48, 2009
4D0O
DownloadVisualize
BU of 4d0o by Molmil
AKAP13 (AKAP-Lbc) DH domain
分子名称: A-KINASE ANCHOR PROTEIN 13
著者Abdul Azeez, K.R, Shrestha, L, Krojer, T, Allerston, C, von Delft, F, Bountra, C, Arrowsmith, C, Edwards, A.M, Knapp, S, Klussmann, E, Elkins, J.M.
登録日2014-04-29
公開日2014-05-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The Crystal Structure of the Rhoa : Akap-Lbc Dh-Ph Domain Complex.
Biochem.J., 464, 2014
4D8L
DownloadVisualize
BU of 4d8l by Molmil
Crystal structure of the 2-pyrone-4,6-dicarboxylic acid hydrolase from sphingomonas paucimobilis
分子名称: 2-pyrone-4,6-dicarbaxylate hydrolase
著者Malashkevich, V.N, Toro, R, Bonanno, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2012-01-10
公開日2012-01-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Catalytic Mechanism of LigI: Insight into the Amidohydrolase Enzymes of cog3618 and Lignin Degradation.
Biochemistry, 51, 2012
1N3K
DownloadVisualize
BU of 1n3k by Molmil
Solution structure of phosphoprotein enriched in astrocytes 15 kDa (PEA-15)
分子名称: Astrocytic phosphoprotein PEA-15
著者Hill, J.M, Vaidyanathan, H, Ramos, J.W, Ginsberg, M.H, Werner, M.H.
登録日2002-10-28
公開日2003-01-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Recognition of ERK MAP Kinase by PEA-15 Reveals a Common Docking Site Within the Death Domain and Death Effector Domain
Embo J., 21, 2002
1PQR
DownloadVisualize
BU of 1pqr by Molmil
Solution Conformation of alphaA-Conotoxin EIVA
分子名称: Alpha-A-conotoxin EIVA
著者Chi, S.-W, Park, K.-H, Suk, J.-E, Olivera, B.M, McIntosh, J.M, Han, K.-H.
登録日2003-06-18
公開日2003-11-04
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution Conformation of alphaA-conotoxin EIVA, a Potent Neuromuscular Nicotinic Acetylcholine Receptor Antagonist from Conus ermineus
J.Biol.Chem., 278, 2003
3MOG
DownloadVisualize
BU of 3mog by Molmil
Crystal structure of 3-hydroxybutyryl-CoA dehydrogenase from Escherichia coli K12 substr. MG1655
分子名称: CHLORIDE ION, GLYCEROL, Probable 3-hydroxybutyryl-CoA dehydrogenase
著者Patskovsky, Y, Ramagopal, U, Toro, R, Gilmore, M, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-04-22
公開日2010-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of 3-Hydroxybutyryl-Coa Dehydrogenase from Escherichia Coli K12
To be Published
4CR3
DownloadVisualize
BU of 4cr3 by Molmil
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
著者Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
登録日2014-02-25
公開日2014-04-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
3I6V
DownloadVisualize
BU of 3i6v by Molmil
Crystal structure of a periplasmic His/Glu/Gln/Arg/opine family-binding protein from Silicibacter pomeroyi in complex with lysine
分子名称: GLYCEROL, LYSINE, SODIUM ION, ...
著者Bonanno, J.B, Rutter, M, Bain, K.T, Miller, S, Romero, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-07-07
公開日2009-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a periplasmic His/Glu/Gln/Arg/opine family-binding protein from Silicibacter pomeroyi in complex with lysine
To be Published
4D0Z
DownloadVisualize
BU of 4d0z by Molmil
GalNAc-T2 crystal soaked with UDP-5SGalNAc, mEA2 and manganese (Higher resolution dataset)
分子名称: (2R,3R,4R,5R,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-5-thio-alpha-D-galactopyranose, ...
著者Lira-Navarrete, E, Iglesias-Fernandez, J, Zandberg, W.F, Companon, I, Kong, Y, Corzana, F, Pinto, B.M, Clausen, H, Peregrina, J.M, Vocadlo, D, Rovira, C, Hurtado-Guerrero, R.
登録日2014-04-30
公開日2014-05-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Substrate-Guided Front-Face Reaction Revealed by Combined Structural Snapshots and Metadynamics for the Polypeptide N- Acetylgalactosaminyltransferase 2.
Angew.Chem.Int.Ed.Engl., 53, 2014
3BG2
DownloadVisualize
BU of 3bg2 by Molmil
Crystal structure of deoxyguanosinetriphosphate triphosphohydrolase from Flavobacterium sp. MED217
分子名称: DGTP triphosphohydrolase
著者Fedorov, A.A, Fedorov, E.V, Toro, R, Meyer, A.J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-11-25
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the deoxyguanosinetriphosphate triphosphohydrolase from Flavobacterium sp. MED217.
To be Published
3BGF
DownloadVisualize
BU of 3bgf by Molmil
X-ray crystal structure of the SARS coronavirus spike receptor binding domain in complex with F26G19 Fab
分子名称: F26G19 Fab, Spike protein S1
著者Pak, J.E, Rini, J.M.
登録日2007-11-26
公開日2008-12-02
最終更新日2021-03-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into immune recognition of the severe acute respiratory syndrome coronavirus S protein receptor binding domain.
J.Mol.Biol., 388, 2009

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon