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PDB: 2408 件

6ALT
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Solution structure of a DNA dodecamer with 5-methylcytosine at the 3rd and 9th position
分子名称: DNA (5'-D(*(DC5)P*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*GP*CP*(DG3))-3')
著者Gruber, D.R, Hoppins, J.J, Miears, H.L, Zharkov, D.O, Smirnov, S.L.
登録日2017-08-08
公開日2017-09-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
1H9P
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Crystal Structure of Dioclea guianensis Seed Lectin
分子名称: CADMIUM ION, LECTIN ALPHA CHAIN, MANGANESE (II) ION
著者Romero, A, Wah, D.A, Gallego Del sol, F, Cavada, B.S, Ramos, M.V, Grangeiro, T.B, Sampaio, A.H, Calvete, J.J.
登録日2001-03-16
公開日2001-03-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Native and Cd/Cd-Substituted Dioclea Guianensis Seed Lectin. A Novel Manganese-Binding Site and Structural Basis of Dimer-Tetramer Association
J.Mol.Biol., 310, 2001
1I8M
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CRYSTAL STRUCTURE OF A RECOMBINANT ANTI-SINGLE-STRANDED DNA ANTIBODY FRAGMENT COMPLEXED WITH DT5
分子名称: 5'-D(*TP*TP*TP*TP*T)-3', 5'-D(P*TP*T)-3', ANTIBODY HEAVY CHAIN FAB, ...
著者Tanner, J.J, Komissarov, A.A, Deutscher, S.L.
登録日2001-03-14
公開日2001-12-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of an Antigen-Binding Fragment Bound to Single-Stranded DNA
J.Mol.Biol., 314, 2001
3AIY
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R6 HUMAN INSULIN HEXAMER (SYMMETRIC), NMR, REFINED AVERAGE STRUCTURE
分子名称: PHENOL, PROTEIN (INSULIN)
著者O'Donoghue, S.I, Chang, X, Abseher, R, Nilges, M, Led, J.J.
登録日1998-12-29
公開日2000-02-28
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Unraveling the symmetry ambiguity in a hexamer: calculation of the R6 human insulin structure.
J.Biomol.NMR, 16, 2000
1HVQ
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CRYSTAL STRUCTURES OF HEVAMINE, A PLANT DEFENCE PROTEIN WITH CHITINASE AND LYSOZYME ACTIVITY, AND ITS COMPLEX WITH AN INHIBITOR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEVAMINE A
著者Terwisscha Van Scheltinga, A.C, Kalk, K.H, Beintema, J.J, Dijkstra, B.W.
登録日1994-10-13
公開日1995-12-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of hevamine, a plant defence protein with chitinase and lysozyme activity, and its complex with an inhibitor.
Structure, 2, 1994
3OSL
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Structure of bovine thrombin-activatable fibrinolysis inhibitor in complex with tick carboxypeptidase inhibitor
分子名称: Carboxypeptidase B2, Carboxypeptidase inhibitor, ZINC ION
著者Valnickova, Z, Sanglas, L, Arolas, J.L, Petersen, S.V, Schar, C, Otzen, D, Aviles, F.X, Gomis-Ruth, F.X, Enghild, J.J.
登録日2010-09-09
公開日2010-09-29
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Flexibility of the Thrombin-activatable Fibrinolysis Inhibitor Pro-domain Enables Productive Binding of Protein Substrates.
J.Biol.Chem., 285, 2010
6DNU
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Crystal Structure of Neisseria meningitidis DsbD c-terminal domain in the oxidised form
分子名称: HEXAETHYLENE GLYCOL, Thiol:disulfide interchange protein DsbD
著者Heras, B, Smith, R.P, Paxman, J.J.
登録日2018-06-07
公開日2018-09-12
最終更新日2018-11-07
実験手法X-RAY DIFFRACTION (2.283 Å)
主引用文献Structural and biochemical insights into the disulfide reductase mechanism of DsbD, an essential enzyme for neisserial pathogens.
J. Biol. Chem., 293, 2018
1KEN
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INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH AN ANTIBODY THAT PREVENTS THE HEMAGGLUTININ LOW PH FUSOGENIC TRANSITION
分子名称: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, hemagglutinin HA1, hemagglutinin HA2, ...
著者Barbey-Martin, C, Gigant, B, Bizebard, T, Calder, L.J, Wharto, S.A, Skehel, J.J, Knossow, M.
登録日2001-11-16
公開日2002-04-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献An Antibody that Prevents the Hemagglutinin Low pH Fusogenic Transition
VIROLOGY, 294, 2002
1KUN
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SOLUTION STRUCTURE OF THE HUMAN ALPHA3-CHAIN TYPE VI COLLAGEN C-TERMINAL KUNITZ DOMAIN, NMR, 20 STRUCTURES
分子名称: ALPHA3-CHAIN TYPE VI COLLAGEN
著者Sorensen, M.D, Bjorn, S, Norris, K, Olsen, O, Petersen, L, James, T.L, Led, J.J.
登録日1997-03-04
公開日1997-11-12
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the human alpha3-chain type VI collagen C-terminal Kunitz domain,.
Biochemistry, 36, 1997
1HQY
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Nucleotide-Dependent Conformational Changes in a Protease-Associated ATPase HslU
分子名称: ADENOSINE-5'-DIPHOSPHATE, HEAT SHOCK LOCUS HSLU, HEAT SHOCK LOCUS HSLV
著者Wang, J, Song, J.J, Seong, I.S, Franklin, M.C, Kamtekar, S, Eom, S.H, Chung, C.H.
登録日2000-12-20
公開日2001-11-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU.
Structure, 9, 2001
1LSO
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BU of 1lso by Molmil
Crystal Structure of the S137A mutant of L-3-Hydroxyacyl-CoA Dehydrogenase in Complex with NAD
分子名称: 3-HYDROXYACYL-COA DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Barycki, J.J, Banaszak, L.J.
登録日2002-05-17
公開日2004-02-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the S137A mutant of L-3-Hydroxyacyl-CoA Dehydrogenase in Complex with NAD
To be Published
1LI5
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Crystal Structure of Cysteinyl-tRNA Synthetase
分子名称: CYSTEINYL-TRNA SYNTHETASE, ZINC ION
著者Newberry, K.J, Hou, Y.-M, Perona, J.J.
登録日2002-04-17
公開日2002-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural origins of amino acid selection without editing by cysteinyl-tRNA synthetase
EMBO J., 21, 2002
1LI7
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Crystal Structure of Cysteinyl-tRNA Synthetase with Cysteine Substrate Bound
分子名称: CYSTEINE, CYSTEINYL-TRNA SYNTHETASE, ZINC ION
著者Newberry, K.J, Hou, Y.-M, Perona, J.J.
登録日2002-04-17
公開日2002-04-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural origins of amino acid selection without editing by cysteinyl-tRNA synthetase
EMBO J., 21, 2002
1LSJ
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BU of 1lsj by Molmil
Crystal Structure of the E110Q Mutant of L-3-Hydroxyacyl-CoA Dehydrogenase in Complex with NAD
分子名称: 3-HYDROXYACYL-COA DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Barycki, J.J, Banaszak, L.J.
登録日2002-05-17
公開日2004-02-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the E110Q Mutant of L-3-Hydroxyacyl-CoA Dehydrogenase in Complex with NAD
To be Published
7Y77
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Crystal structure of rice NAL1
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1
著者Yan, J.J, Guan, Z.Y, Yin, P, Xiong, L.Z.
登録日2022-06-21
公開日2023-07-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Serine protease NAL1 exerts pleiotropic functions through degradation of TOPLESS-related corepressor in rice.
Nat.Plants, 9, 2023
1N2R
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A natural selected dimorphism in HLA B*44 alters self, peptide reportoire and T cell recognition.
分子名称: ACETIC ACID, Beta-2-microglobulin, HLA DPA*0201 PEPTIDE, ...
著者Macdonald, W.A, Purcell, A.W, Williams, D.S, Mifsud, N, Ely, L.K, Gorman, J.J, Clements, C.S, Kjer-Nielsen, L, Koelle, D.M, Brooks, A.G, Lovrecz, G.O, Lu, L, Rossjohn, J, McCluskey, J.
登録日2002-10-24
公開日2004-03-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A naturally selected dimorphism within the HLA-B44 supertype alters class I structure, peptide repertoire, and T cell recognition.
J.Exp.Med., 198, 2003
6D6U
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BU of 6d6u by Molmil
Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, GAMMA-AMINO-BUTANOIC ACID, ...
著者Zhu, S, Noviello, C.M, Teng, J, Walsh Jr, R.M, Kim, J.J, Hibbs, R.E.
登録日2018-04-22
公開日2018-06-27
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.92 Å)
主引用文献Structure of a human synaptic GABAAreceptor.
Nature, 559, 2018
6D96
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Structure of influenza neuraminidase from strain A/BrevigMission/1/1918(H1N1) expressed in HEK-293E cells
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Campbell, A.C, Krause, K.L, Tanner, J.J.
登録日2018-04-27
公開日2019-05-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Optimisation of neuraminidase expression by HEK-293E cells for use in structural biology
To Be Published
4FEP
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Crystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurine
分子名称: 9H-PURINE-2,6-DIAMINE, A24U/U25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain, COBALT HEXAMMINE(III)
著者Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
登録日2012-05-30
公開日2013-02-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.
J.Mol.Biol., 425, 2013
8K0S
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The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 with 10-nt TRS at symmetric apo state
分子名称: MAGNESIUM ION, RNA (543-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-01
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8F3D
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3-methylcrotonyl-CoA carboxylase in filament, beta-subunit centered
分子名称: 3-methylcrotonyl-CoA carboxylase alpha-subunit, 3-methylcrotonyl-CoA carboxylase beta-subunit, 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL
著者Hu, J.J, Lee, J.K.J, Liu, Y.T, Yu, C, Huang, L, Afasizheva, I, Afasizhev, R, Zhou, Z.H.
登録日2022-11-09
公開日2023-01-11
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Discovery, structure, and function of filamentous 3-methylcrotonyl-CoA carboxylase.
Structure, 31, 2023
6D97
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Structure of aldehyde dehydrogenase 12 (ALDH12) from Zea mays
分子名称: Aldehyde dehydrogenase 12, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Tanner, J.J, Korasick, D.A, Kopecny, D.
登録日2018-04-27
公開日2019-01-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Biochemical Characterization of Aldehyde Dehydrogenase 12, the Last Enzyme of Proline Catabolism in Plants.
J. Mol. Biol., 431, 2019
5GQR
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Crystal structure of PXY-CLE41-SERK2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat receptor-like protein kinase TDR, Somatic embryogenesis receptor kinase 2, ...
著者Chai, J.J, Zhang, H.Q.
登録日2016-08-08
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献SERK Family Receptor-like Kinases Function as Co-receptors with PXY for Plant Vascular Development
Mol Plant, 9, 2016
8K15
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The Streptococcus azizii ORF-less Group IIC intron HYER2 at apo state
分子名称: MAGNESIUM ION, RNA (470-MER)
著者Zhu, H.Z, Liu, J.J.G.
登録日2023-07-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
4FE5
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Crystal structure of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine
分子名称: ACETATE ION, COBALT HEXAMMINE(III), HYPOXANTHINE, ...
著者Stoddard, C.D, Trausch, J.J, Widmann, J, Marcano, J, Knight, R, Batey, R.T.
登録日2012-05-29
公開日2012-06-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine.
Nature, 432, 2004

224004

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