Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2408 件

1ABZ
DownloadVisualize
BU of 1abz by Molmil
ALPHA-T-ALPHA, A DE NOVO DESIGNED PEPTIDE, NMR, 23 STRUCTURES
分子名称: ALPHA-T-ALPHA
著者Fezoui, Y, Connolly, P.J, Osterhout, J.J.
登録日1997-01-31
公開日1998-02-04
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Solution structure of alpha t alpha, a helical hairpin peptide of de novo design.
Protein Sci., 6, 1997
2X85
DownloadVisualize
BU of 2x85 by Molmil
Tailspike protein of E. coli bacteriophage HK620 in complex with hexasaccharide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, TAILSPIKE PROTEIN HK620, ...
著者Lorenzen, N.K, Mueller, J.J, Heinemann, U, Seckler, R, Barbirz, S.
登録日2010-03-05
公開日2011-03-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Single Amino Acid Exchange in Bacteriophage Hk620 Tailspike Protein Results in Thousand-Fold Increase of its Oligosaccharide Affinity.
Glycobiology, 23, 2013
2X6X
DownloadVisualize
BU of 2x6x by Molmil
Tailspike protein mutant D339N of E.coli bacteriophage HK620 in complex with hexasaccharide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TAILSPIKE PROTEIN HK620, alpha-L-rhamnopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)]alpha-D-galactopyranose
著者Lorenzen, N.K, Mueller, J.J, Heinemann, U, Seckler, R, Barbirz, S.
登録日2010-02-22
公開日2011-03-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Single Amino Acid Exchange in Bacteriophage Hk620 Tailspike Protein Results in Thousand-Fold Increase of its Oligosaccharide Affinity.
Glycobiology, 23, 2013
4DMX
DownloadVisualize
BU of 4dmx by Molmil
Cathepsin K inhibitor
分子名称: (1R,2R)-N-(1-cyanocyclopropyl)-2-{[4-(4-fluorophenyl)piperazin-1-yl]carbonyl}cyclohexanecarboxamide, Cathepsin K, GLYCEROL
著者Dossetter, A.G, Beeley, H, Bowyer, J, Cook, C.R, Crawford, J.J, Finlayson, J.E, Heron, N.M, Heyes, C, Highton, A.J, Hudson, J.A, Kenny, P.W, Martin, S, MacFaul, P.A, McGuire, T.M, Gutierrez, P.M, Morley, A.D, Morris, J.J, Page, K.M, Rosenbrier Ribeiro, L, Sawney, H, Steinbacher, S, Krapp, S, Jestel, A, Smith, C, Vickers, M.
登録日2012-02-08
公開日2012-07-11
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献(1R,2R)-N-(1-cyanocyclopropyl)-2-(6-methoxy-1,3,4,5-tetrahydropyrido[4,3-b]indole-2-carbonyl)cyclohexanecarboxamide (AZD4996): a potent and highly selective cathepsin K inhibitor for the treatment of osteoarthritis.
J.Med.Chem., 55, 2012
4DMY
DownloadVisualize
BU of 4dmy by Molmil
Cathepsin K inhibitor
分子名称: (1R,2R)-N-(1-cyanocyclopropyl)-2-[(8-fluoro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl)carbonyl]cyclohexanecarboxamide, Cathepsin K, GLYCEROL, ...
著者Dossetter, A.G, Beeley, H, Bowyer, J, Cook, C.R, Crawford, J.J, Finlayson, J.E, Heron, N.M, Heyes, C, Highton, A.J, Hudson, J.A, Kenny, P.W, Martin, S, MacFaul, P.A, McGuire, T.M, Gutierrez, P.M, Morley, A.D, Morris, J.J, Page, K.M, Rosenbrier Ribeiro, L, Sawney, H, Steinbacher, S, Krapp, S, Jestel, A, Smith, C, Vickers, M.
登録日2012-02-08
公開日2012-07-11
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献(1R,2R)-N-(1-cyanocyclopropyl)-2-(6-methoxy-1,3,4,5-tetrahydropyrido[4,3-b]indole-2-carbonyl)cyclohexanecarboxamide (AZD4996): a potent and highly selective cathepsin K inhibitor for the treatment of osteoarthritis.
J.Med.Chem., 55, 2012
1Q5K
DownloadVisualize
BU of 1q5k by Molmil
crystal structure of Glycogen synthase kinase 3 in complexed with inhibitor
分子名称: Glycogen synthase kinase-3 beta, N-(4-METHOXYBENZYL)-N'-(5-NITRO-1,3-THIAZOL-2-YL)UREA
著者Bhat, R, Xue, Y, Berg, S, Hellberg, S, Ormo, M, Nilsson, Y, Radesater, A.C, Jerning, E, Markgren, P.O, Borgegard, T, Nylof, M, Gimenez-Cassina, A, Hernandez, F, Lucas, J.J, Diaz-Mido, J, Avila, J.
登録日2003-08-08
公開日2004-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural insights and biological effects of glycogen synthase kinase 3-specific inhibitor AR-A014418.
J.Biol.Chem., 278, 2003
1O0C
DownloadVisualize
BU of 1o0c by Molmil
CRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASE
分子名称: ADENOSINE MONOPHOSPHATE, GLUTAMIC ACID, Glutaminyl tRNA, ...
著者Bullock, T.L, Perona, J.J.
登録日2003-02-20
公開日2003-04-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Amino Acid Discrimination by a class I aminoacyl-tRNA synthetase specified by negative determinants
J.Mol.Biol., 328, 2003
3UBI
DownloadVisualize
BU of 3ubi by Molmil
The Absence of Tertiary Interactions in a Self-Assembled DNA Crystal Structure
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*CP*GP*TP*AP*CP*TP*CP*G)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*AP*GP*GP*CP*TP*GP*C)-3'), DNA (5'-D(P*CP*CP*GP*AP*GP*TP*AP*CP*GP*AP*CP*GP*AP*CP*AP*AP*G)-3'), ...
著者Nguyen, N, Birktoft, J.J, Sha, R, Wang, T, Zheng, J, Constantinou, P.E, Ginell, S.L, Chen, Y, Mao, C, Seeman, N.C.
登録日2011-10-24
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (6.8046 Å)
主引用文献The absence of tertiary interactions in a self-assembled DNA crystal structure.
J.Mol.Recognit., 25, 2012
1QSC
DownloadVisualize
BU of 1qsc by Molmil
CRYSTAL STRUCTURE OF THE TRAF DOMAIN OF TRAF2 IN A COMPLEX WITH A PEPTIDE FROM THE CD40 RECEPTOR
分子名称: CD40 RECEPTOR, TNF RECEPTOR ASSOCIATED FACTOR 2
著者McWhirter, S.M, Pullen, S.S, Holton, J.M, Crute, J.J, Kehry, M.R, Alber, T.
登録日1999-06-20
公開日1999-08-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic analysis of CD40 recognition and signaling by human TRAF2.
Proc.Natl.Acad.Sci.USA, 96, 1999
1Q51
DownloadVisualize
BU of 1q51 by Molmil
Crystal Structure of Mycobacterium tuberculosis MenB in Complex with Acetoacetyl-Coenzyme A, a Key Enzyme in Vitamin K2 Biosynthesis
分子名称: ACETOACETYL-COENZYME A, menB
著者Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
登録日2003-08-05
公開日2004-01-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003
1Q52
DownloadVisualize
BU of 1q52 by Molmil
Crystal Structure of Mycobacterium tuberculosis MenB, a Key Enzyme in Vitamin K2 Biosynthesis
分子名称: menB
著者Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
登録日2003-08-05
公開日2004-01-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003
1GP4
DownloadVisualize
BU of 1gp4 by Molmil
Anthocyanidin synthase from Arabidopsis thaliana (selenomethionine substituted)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-OXOGLUTARIC ACID, ANTHOCYANIDIN SYNTHASE
著者Wilmouth, R.C, Turnbull, J.J, Welford, R.W.D, Clifton, I.J, Prescott, A.G, Schofield, C.J.
登録日2001-10-30
公開日2002-02-21
最終更新日2013-09-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Mechanism of Anthocyanidin Synthase from Arabidopsis Thaliana.
Structure, 10, 2002
4HCE
DownloadVisualize
BU of 4hce by Molmil
Crystal structure of the telomeric Saccharomyces cerevisiae Cdc13 OB2 domain
分子名称: Cell division control protein 13
著者Mason, M, Wannat, J.J, Harper, S, Schultz, D.C, Speicher, D.W, Johnson, F.B, Skordalakes, E.
登録日2012-09-29
公開日2012-11-28
最終更新日2013-01-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cdc13 OB2 Dimerization Required for Productive Stn1 Binding and Efficient Telomere Maintenance.
Structure, 21, 2013
1NIP
DownloadVisualize
BU of 1nip by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII
分子名称: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Komiya, H, Georgiadis, M.M, Chakrabarti, P, Woo, D, Kornuc, J.J, Rees, D.C.
登録日1992-09-29
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystallographic structure of the nitrogenase iron protein from Azotobacter vinelandii.
Science, 257, 1992
1QR1
DownloadVisualize
BU of 1qr1 by Molmil
POOR BINDING OF A HER-2/NEU EPITOPE (GP2) TO HLA-A2.1 IS DUE TO A LACK OF INTERACTIONS IN THE CENTER OF THE PEPTIDE
分子名称: BETA-2 MICROGLOBULIN, GP2 PEPTIDE, HLA-A2.1 HEAVY CHAIN
著者Kuhns, J.J, Batalia, M.A, Yan, S, Collins, E.J.
登録日1999-06-17
公開日2000-01-01
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Poor binding of a HER-2/neu epitope (GP2) to HLA-A2.1 is due to a lack of interactions with the center of the peptide.
J.Biol.Chem., 274, 1999
1F6Y
DownloadVisualize
BU of 1f6y by Molmil
MAD CRYSTAL STRUCTURE ANALYSIS OF METHYLTETRAHYDROFOLATE: CORRINOID/IRON-SULFUR PROTEIN METHYLTRANSFERASE (METR)
分子名称: 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE
著者Doukov, T.I, Seravalli, J, Stezowski, J.J, Ragsdale, S.W.
登録日2000-06-23
公開日2000-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a methyltetrahydrofolate- and corrinoid-dependent methyltransferase.
Structure Fold.Des., 8, 2000
2HMG
DownloadVisualize
BU of 2hmg by Molmil
REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ (HA1 CHAIN), HEMAGGLUTININ (HA2 CHAIN), ...
著者Weis, W.I, Bruenger, A.T, Skehel, J.J, Wiley, D.C.
登録日1989-09-11
公開日1991-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Refinement of the influenza virus hemagglutinin by simulated annealing.
J.Mol.Biol., 212, 1990
1GP6
DownloadVisualize
BU of 1gp6 by Molmil
Anthocyanidin synthase from Arabidopsis thaliana complexed with trans-dihydroquercetin (with 30 min exposure to O2)
分子名称: (2S,3S)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,5,7,3',4'-PENTAHYDROXYFLAVONE, ...
著者Wilmouth, R.C, Turnbull, J.J, Welford, R.W.D, Clifton, I.J, Prescott, A.G, Schofield, C.J.
登録日2001-10-30
公開日2002-02-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and Mechanism of Anthocyanidin Synthase from Arabidopsis Thaliana.
Structure, 10, 2002
1GSG
DownloadVisualize
BU of 1gsg by Molmil
Structure of E.coli glutaminyl-tRNA synthetase complexed with trnagln and ATP at 2.8 Angstroms resolution
分子名称: GLUTAMINYL-TRNA SYNTHETASE, TRNAGLN
著者Rould, M.A, Perona, J.J, Soell, D, Steitz, T.A.
登録日1990-04-03
公開日1992-02-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution.
Science, 246, 1989
3UC0
DownloadVisualize
BU of 3uc0 by Molmil
Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
分子名称: GLYCEROL, Heavy chain, monoclonal antibody 5H2, ...
著者Cockburn, J.J.B, Stura, E.A, Navarro-Sanchez, M.E, Rey, F.A.
登録日2011-10-25
公開日2011-12-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structural insights into the neutralization mechanism of a higher primate antibody against dengue virus.
Embo J., 31, 2012
7CRC
DownloadVisualize
BU of 7crc by Molmil
Cryo-EM structure of plant NLR RPP1 tetramer in complex with ATR1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Avirulence protein ATR1, ...
著者Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
登録日2020-08-13
公開日2020-12-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
3UD1
DownloadVisualize
BU of 3ud1 by Molmil
Crystal structure of ZU5A-ZU5B domains of human erythrocyte ankyrin
分子名称: Ankyrin-1, ETHANOL
著者Yasunaga, M, Ipsaro, J.J, Mondragon, A.
登録日2011-10-27
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structurally Similar but Functionally Diverse ZU5 Domains in Human Erythrocyte Ankyrin.
J.Mol.Biol., 417, 2012
7CRB
DownloadVisualize
BU of 7crb by Molmil
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
分子名称: Avirulence protein ATR1, NAD+ hydrolase (NADase)
著者Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
登録日2020-08-13
公開日2020-12-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
4O8A
DownloadVisualize
BU of 4o8a by Molmil
First structure of a proline utilization A proline dehydrogenase domain
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Tanner, J.J.
登録日2013-12-26
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the proline dehydrogenase domain of the multifunctional PutA flavoprotein.
Nat.Struct.Biol., 10, 2003
3UYP
DownloadVisualize
BU of 3uyp by Molmil
Crystal structure of the dengue virus serotype 4 envelope protein domain III in complex with the variable domains of Mab 4E11
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Envelope protein, GLYCEROL, ...
著者Cockburn, J.J.B, Navarro Sanchez, M.E, Fretes, N, Urvoas, A, Staropoli, I, Kikuti, C.M, Coffey, L.L, Arenzana Seisdedos, F, Bedouelle, H, Rey, F.A.
登録日2011-12-06
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanism of dengue virus broad cross-neutralization by a monoclonal antibody.
Structure, 20, 2012

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon