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PDB: 6634 results

2GVG
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BU of 2gvg by Molmil
Crystal Structure of human NMPRTase and its complex with NMN
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Nicotinamide phosphoribosyltransferase, PHOSPHATE ION
Authors:Khan, J.A, Tao, X, Tong, L.
Deposit date:2006-05-02
Release date:2006-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis for the inhibition of human NMPRTase, a novel target for anticancer agents.
Nat.Struct.Mol.Biol., 13, 2006
2H74
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BU of 2h74 by Molmil
Crystal Structure of Thioredoxin Mutant D2E in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Thioredoxin Mutant D2E in Hexagonal (p61) Space Group
To be Published
7R0T
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BU of 7r0t by Molmil
Crystal structure of exonuclease ExnV1
Descriptor: CHLORIDE ION, Exonuclease ExnV1, MAGNESIUM ION, ...
Authors:Welin, M, Svensson, A, Hakansson, M, Al-Karadaghi, S, Jasilionis, A, Linares-Pasten, J.A, Wang, L, Nordberg Karlsson, E, Ahlqvist, J.
Deposit date:2022-02-02
Release date:2022-11-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Crystal structure of DNA polymerase I from Thermus phage G20c.
Acta Crystallogr D Struct Biol, 78, 2022
7R0K
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BU of 7r0k by Molmil
Crystal structure of Polymerase I from phage G20c
Descriptor: DNA polymerase I
Authors:Welin, M, Svensson, A, Hakansson, M, Al-Karadaghi, S, Linares-Pasten, J.A, Jasilionis, A, Nordberg Karlsson, E, Ahlqvist, J.
Deposit date:2022-02-02
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.972 Å)
Cite:Crystal structure of DNA polymerase I from Thermus phage G20c.
Acta Crystallogr D Struct Biol, 78, 2022
2HBQ
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BU of 2hbq by Molmil
Crystal structure of wildtype human caspase-1 in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Descriptor: Caspase-1, N-[(benzyloxy)carbonyl]-L-valyl-N-[(2S)-1-carboxy-4-fluoro-3-oxobutan-2-yl]-L-alaninamide
Authors:Scheer, J.M, Wells, J.A, Romanowski, M.J.
Deposit date:2006-06-14
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Common Allosteric Site and Mechanism in Caspases
Proc.Natl.Acad.Sci.USA, 103, 2006
7QZR
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Structure of native leukocyte myeloperoxidase in complex with the Staphyloccal Peroxidase Inhibitor SPIN from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Pfanzagl, V, Brito, J.A.
Deposit date:2022-01-31
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:The staphylococcal inhibitory protein SPIN binds to human myeloperoxidase with picomolar affinity but only dampens halide oxidation.
J.Biol.Chem., 298, 2022
2H4R
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BU of 2h4r by Molmil
Crystal structure of wildtype MENT in the native conformation
Descriptor: Heterochromatin-associated protein MENT
Authors:Irving, J.A, Whisstock, J.C, Buckle, A.M, McGowan, S.
Deposit date:2006-05-25
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation.
Embo J., 25, 2006
2H73
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Crystal Structure of Thioredoxin Mutant D43E in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of Thioredoxin Mutant D43E in Hexagonal (p61) Space Group
To be Published
7RRN
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BU of 7rrn by Molmil
E. coli cysteine desulfurase SufS R56A
Descriptor: CHLORIDE ION, Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
Authors:Dunkle, J.A, Gogar, R, Frantom, P.A.
Deposit date:2021-08-10
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Contributions of the active site floor in cysteine desulfurase activity
To be published
7QYY
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BU of 7qyy by Molmil
Vanadium-dependent bromoperoxidase from Corallina pilulifera in complex with chloride
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Isupov, M.N, Mitchell, D, Littelchild, J.A, Garcia-Rodriguez, E.
Deposit date:2022-01-29
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera
To Be Published
2GVJ
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Crystal Structure of Human NMPRTase in complex with FK866
Descriptor: (2E)-N-{4-[1-(benzenecarbonyl)piperidin-4-yl]butyl}-3-(pyridin-3-yl)prop-2-enamide, Nicotinamide phosphoribosyltransferase
Authors:Khan, J.A, Tao, X, Tong, L.
Deposit date:2006-05-02
Release date:2006-06-20
Last modified:2016-11-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for the inhibition of human NMPRTase, a novel target for anticancer agents.
Nat.Struct.Mol.Biol., 13, 2006
2KFN
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KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND MANGANESE
Descriptor: 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ...
Authors:Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
Deposit date:1998-07-01
Release date:1998-11-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
2KIC
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BU of 2kic by Molmil
n-NafY. N-terminal domain of NafY
Descriptor: Nitrogenase gamma subunit
Authors:Phillips, A.H, Hernandez, J.A, Erbil, K, Pelton, J.G, Wemmer, D.E, Rubio, L.M.
Deposit date:2009-05-01
Release date:2010-12-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Biological activity and solution structure of the apo-dinitrogenase binding domain of NafY
J.Biol.Chem., 2010
2KCF
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BU of 2kcf by Molmil
The NMR solution structure of the isolated Apo Pin1 WW domain
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Kowalski, J.A, Liu, K, Kelly, J.W.
Deposit date:2008-12-19
Release date:2009-01-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR solution structure of the isolated Apo Pin1 WW domain: comparison to the x-ray crystal structures of Pin1
Biopolymers, 63, 2002
2H48
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BU of 2h48 by Molmil
Crystal structure of human caspase-1 (Cys362->Ala, Cys364->Ala, Cys397->Ala) in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Descriptor: Caspase 1, isoform gamma, N-[(benzyloxy)carbonyl]-L-valyl-N-[(2S)-1-carboxy-4-fluoro-3-oxobutan-2-yl]-L-alaninamide
Authors:Scheer, J.M, Wells, J.A, Romanowski, M.J.
Deposit date:2006-05-23
Release date:2006-06-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A common allosteric site and mechanism in caspases
Proc.Natl.Acad.Sci.USA, 103, 2006
2H4Q
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BU of 2h4q by Molmil
Crystal structure of a M-loop deletion variant of MENT in the cleaved conformation
Descriptor: Heterochromatin-associated protein MENT
Authors:Whisstock, J.C, Buckle, A.M, McGowan, S, Irving, J.A.
Deposit date:2006-05-25
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation.
Embo J., 25, 2006
2H54
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BU of 2h54 by Molmil
Crystal structure of human caspase-1 (Thr388->Ala) in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Descriptor: Caspase-1, N-[(benzyloxy)carbonyl]-L-valyl-N-[(2S)-1-carboxy-4-fluoro-3-oxobutan-2-yl]-L-alaninamide
Authors:Scheer, J.M, Wells, J.A, Romanowski, M.J.
Deposit date:2006-05-25
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An allosteric circuit in caspase-1.
J.Mol.Biol., 381, 2008
2H4P
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BU of 2h4p by Molmil
Crystal structure of wildtype MENT in the cleaved conformation
Descriptor: Heterochromatin-associated protein MENT
Authors:Buckle, A.M, McGowan, S, Irving, J.A, Whisstock, J.C.
Deposit date:2006-05-24
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation.
Embo J., 25, 2006
2H72
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BU of 2h72 by Molmil
Crystal Structure of Thioredoxin mutant E85D in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Thioredoxin mutant E85D in Hexagonal (p61) Space Group
To be Published
2HCG
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BU of 2hcg by Molmil
Structure of S65T Y66F GFP variant after cyclization, carbon-carbon bond cleavage, and oxygen incorporation reactions
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-16
Release date:2007-03-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
2HEZ
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BU of 2hez by Molmil
Bifidobacterium longum bile salt hydrolase
Descriptor: Bile salt hydrolase, SULFATE ION
Authors:Suresh, C.G, Kumar, R.S, Brannigan, J.A.
Deposit date:2006-06-22
Release date:2006-09-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Functional Analysis of a Conjugated Bile Salt Hydrolase from Bifidobacterium longum Reveals an Evolutionary Relationship with Penicillin V Acylase.
J.Biol.Chem., 281, 2006
2H4W
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BU of 2h4w by Molmil
Crystal structure of human caspase-1 (Glu390->Asp) in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Descriptor: Caspase-1, N-[(benzyloxy)carbonyl]-L-valyl-N-[(2S)-1-carboxy-4-fluoro-3-oxobutan-2-yl]-L-alaninamide
Authors:Scheer, J.M, Wells, J.A, Romanowski, M.J.
Deposit date:2006-05-25
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:An allosteric circuit in caspase-1.
J.Mol.Biol., 381, 2008
2H6Y
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BU of 2h6y by Molmil
Crystal Structure of Thioredoxin Mutant E48D in Hexagonal (p61) Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Thioredoxin
Authors:Gavira, J.A, Godoy-Ruiz, R, Ibarra-Molero, B, Sanchez-Ruiz, J.M.
Deposit date:2006-06-01
Release date:2007-05-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Thioredoxin Mutant E48D in Hexagonal (p61) Space Group
To be Published
2HBR
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BU of 2hbr by Molmil
Crystal structure of human caspase-1 (Arg286->Ala) in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Descriptor: Caspase-1, N-[(benzyloxy)carbonyl]-L-valyl-N-[(2S)-1-carboxy-4-fluoro-3-oxobutan-2-yl]-L-alaninamide
Authors:Scheer, J.M, Wells, J.A, Romanowski, M.J.
Deposit date:2006-06-14
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Common Allosteric Site and Mechanism in Caspases
Proc.Natl.Acad.Sci.USA, 103, 2006
2HBZ
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BU of 2hbz by Molmil
Crystal structure of human caspase-1 (Arg286->Ala, Glu390->Ala) in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Descriptor: Caspase-1, PHQ-VAD-fluoromethylketone inhibitor
Authors:Scheer, J.M, Wells, J.A, Romanowski, M.J.
Deposit date:2006-06-14
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Common Allosteric Site and Mechanism in Caspases
Proc.Natl.Acad.Sci.USA, 103, 2006

223790

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