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PDB: 6626 件

1PU0
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Structure of Human Cu,Zn Superoxide Dismutase
分子名称: COPPER (I) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
著者DiDonato, M, Craig, L, Huff, M.E, Thayer, M.M, Cardoso, R.M.F, Kassmann, C.J, Lo, T.P, Bruns, C.K, Powers, E.T, Kelly, J.W, Getzoff, E.D, Tainer, J.A.
登録日2003-06-23
公開日2003-09-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献ALS Mutants of Human Superoxide Dismutase Form Fibrous Aggregates Via Framework Destabilization
J.Mol.Biol., 332, 2003
1PZN
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Rad51 (RadA)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA repair and recombination protein rad51, GLYCEROL, ...
著者Shin, D.S, Tainer, J.A.
登録日2003-07-12
公開日2003-09-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Full-length archaeal Rad51 structure and mutants: Mechanisms for RAD51 assembly and control by BRCA2
Embo J., 22, 2003
1Q4L
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GSK-3 Beta complexed with Inhibitor I-5
分子名称: 2-CHLORO-5-[4-(3-CHLORO-PHENYL)-2,5-DIOXO-2,5-DIHYDRO-1H-PYRROL-3-YLAMINO]-BENZOIC ACID, GLYCOGEN SYNTHASE KINASE-3 BETA
著者Bertrand, J.A, Thieffine, S, Vulpetti, A, Cristiani, C, Valsasina, B, Knapp, S, Kalisz, H.M, Flocco, M.
登録日2003-08-04
公開日2003-10-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural Characterization of the Gsk-3Beta Active Site Using Selective and Non-selective ATP-Mimetic Inhibitors
J.Mol.Biol., 333, 2003
1QVL
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Structure of the antimicrobial hexapeptide cyc-(RRWWRF) bound to SDS micelles
分子名称: c-RW
著者Appelt, C, Soderhall, J.A, Bienert, M, Dathe, M, Schmieder, P.
登録日2003-08-28
公開日2004-09-28
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Structure of the Antimicrobial, Cationic Hexapeptide Cyclo(RRWWRF) and Its Analogues in Solution and Bound to Detergent Micelles
Chembiochem, 6, 2005
3GYH
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Crystal Structure Analysis of S. Pombe ATL in complex with damaged DNA containing POB
分子名称: 1-PYRIDIN-3-YLBUTAN-1-ONE, Alkyltransferase-like protein 1, DNA (5'-D(*CP*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*G)-3'), ...
著者Tubbs, J.L, Arvai, A.S, Tainer, J.A, Shin, D.S.
登録日2009-04-03
公開日2009-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Flipping of alkylated DNA damage bridges base and nucleotide excision repair.
Nature, 459, 2009
1R0Q
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Characterization of the conversion of the malformed, recombinant cytochrome rc552 to a 2-formyl-4-vinyl (Spirographis) heme
分子名称: 2-FORMYL-PROTOPORPHRYN IX, Cytochrome c-552
著者Fee, J.A, Todaro, T.R, Luna, E, Sanders, D, Hunsicker-Wang, L.M, Patel, K.M, Bren, K.L, Gomez-Moran, E, Hill, M.G, Ai, J, Loehr, T.M, Oertling, W.A, Williams, P.A, Stout, C.D, McRee, D, Pastuszyn, A.
登録日2003-09-22
公開日2004-09-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Cytochrome rC552, formed during expression of the truncated, Thermus thermophilus cytochrome c552 gene in the cytoplasm of Escherichia coli, reacts spontaneously to form protein-bound 2-formyl-4-vinyl (Spirographis) heme.
Biochemistry, 43, 2004
1QYF
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Crystal structure of matured green fluorescent protein R96A variant
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, green-fluorescent protein
著者Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2003-09-10
公開日2003-09-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
1QYQ
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Crystal Structure of the cyclized S65G Y66G GFP variant
分子名称: green-fluorescent protein
著者Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2003-09-11
公開日2003-09-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
1QYZ
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Characterization of the malformed, recombinant cytochrome rC552
分子名称: 2-ACETYL-PROTOPORPHYRIN IX, Cytochrome c-552
著者Fee, J.A, Todaro, T.R, Luna, E, Sanders, D, Hunsicker-Wang, L.M, Patel, K.M, Bren, K.L, Gomez-Moran, E, Hill, M.G, Ai, J, Loehr, T.M, Oertling, W.A, Williams, P.A, Stout, C.D, McRee, D, Pastuszyn, A.
登録日2003-09-12
公開日2004-09-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Cytochrome rC552, formed during expression of the truncated, Thermus thermophilus cytochrome c552 gene in the cytoplasm of Escherichia coli, reacts spontaneously to form protein-bound 2-formyl-4-vinyl (Spirographis) heme.
Biochemistry, 43, 2004
1QET
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TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES
分子名称: RNA (5'-R(*GP*GP*AP*UP*GP*UP*CP*C)-3')
著者Mcdowell, J.A, He, L, Chen, X, Turner, D.H.
登録日1997-03-04
公開日1997-06-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Investigation of the structural basis for thermodynamic stabilities of tandem GU wobble pairs: NMR structures of (rGGAGUUCC)2 and (rGGAUGUCC)2.
Biochemistry, 36, 1997
3DI2
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Crystal structure of the complex of human interleukin-7 with unglycosylated human interleukin-7 receptor alpha ectodomain
分子名称: Interleukin-7, Interleukin-7 receptor subunit alpha, PENTAETHYLENE GLYCOL
著者McElroy, C.A, Dohm, J.A, Walsh, S.T.R.
登録日2008-06-19
公開日2009-01-27
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Biophysical Studies of the Human IL-7/IL-7Ralpha Complex.
Structure, 17, 2009
3DDM
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CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM Bordetella bronchiseptica RB50
分子名称: Putative mandelate racemase/muconate lactonizing enzyme
著者Fedorov, A.A, Fedorov, E.V, Toro, R, Gerlt, J.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-05
公開日2008-06-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM Bordetella bronchiseptica RB50
To be Published
3DGB
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Crystal structure of muconate lactonizing enzyme from Pseudomonas Fluorescens complexed with muconolactone
分子名称: MAGNESIUM ION, Muconate cycloisomerase, [(2S)-5-oxo-2,5-dihydrofuran-2-yl]acetic acid
著者Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-06-13
公開日2009-03-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes
Biochemistry, 48, 2009
1QMB
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Cleaved alpha-1-antitrypsin polymer
分子名称: ALPHA-1-ANTITRYPSIN
著者Huntington, J.A, Pannu, N.S, Hazes, B, Read, R.J, Lomas, D.A, Carrell, R.W.
登録日1999-09-24
公開日2000-02-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A 2.6A Structure of a Serpin Polymer and Implications for Conformational Disease
J.Mol.Biol., 293, 1999
3DG3
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Crystal structure of muconate lactonizing enzyme from Mucobacterium Smegmatis
分子名称: MAGNESIUM ION, Muconate cycloisomerase
著者Fedorov, A.A, Fedorov, E.V, Sakai, A, Gerlt, J.A, Almo, S.C.
登録日2008-06-12
公開日2009-03-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes
Biochemistry, 48, 2009
3DAQ
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Crystal structure of dihydrodipicolinate synthase from methicillin-resistant Staphylococcus aureus
分子名称: CHLORIDE ION, Dihydrodipicolinate synthase, GLYCEROL
著者Dobson, R.C.J, Burgess, B.R, Jameson, G.B, Gerrard, J.A, Parker, M.W, Perugini, M.A.
登録日2008-05-29
公開日2008-08-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and evolution of a novel dimeric enzyme from a clinically-important bacterial pathogen.
J.Biol.Chem., 2008
3HBG
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Structure of recombinant Chicken Liver Sulfite Oxidase mutant C185S
分子名称: HYDROXY(DIOXO)MOLYBDENUM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, Sulfite Oxidase mutant C185S
著者Qiu, J.A.
登録日2009-05-04
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site.
Biochemistry, 49, 2010
3H5F
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Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides.
分子名称: ACETATE ION, CHLORIDE ION, COIL SER L16L-Pen, ...
著者Peacock, A.F.A, Stuckey, J.A, Pecoraro, V.L.
登録日2009-04-22
公開日2009-07-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides.
Angew.Chem.Int.Ed.Engl., 48, 2009
3HCL
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Helical superstructures in a DNA oligonucleotide crystal
分子名称: DNA (5'-D(*CP*GP*AP*TP*AP*T)-3')
著者De Luchi, D, Martinez de Ilarduya, I, Subirana, J.A, Uson, I, Campos, J.L.
登録日2009-05-06
公開日2010-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献A geometric approach to the crystallographic solution of nonconventional DNA structures: helical superstructures of d(CGATAT)
Angew.Chem.Int.Ed.Engl., 49, 2010
3HBQ
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Structure of recombinant Chicken Liver Sulfite Oxidase mutant Cys 185 Ala
分子名称: GLYCEROL, HYDROXY(DIOXO)MOLYBDENUM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, ...
著者Qiu, J.A.
登録日2009-05-04
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site.
Biochemistry, 49, 2010
3HC2
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Crystal Structure of chicken sulfite oxidase mutant Tyr 322 Phe
分子名称: MOLYBDENUM ATOM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, sulfite oxidase
著者Qiu, J.A.
登録日2009-05-05
公開日2010-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure function studies in sulfite oxidase with altered active sites
To be Published
3HGJ
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Old Yellow Enzyme from Thermus scotoductus SA-01 complexed with p-hydroxy-benzaldehyde
分子名称: Chromate reductase, FLAVIN MONONUCLEOTIDE, P-HYDROXYBENZALDEHYDE
著者Opperman, D.J, Sewell, B.T, Litthauer, D, Isupov, M.N, Littlechild, J.A, van Heerden, E.
登録日2009-05-14
公開日2010-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a thermostable old yellow enzyme from Thermus scotoductus SA-01
Biochem.Biophys.Res.Commun., 393, 2010
3HF3
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Old Yellow Enzyme from Thermus scotoductus SA-01
分子名称: Chromate reductase, FLAVIN MONONUCLEOTIDE, SULFATE ION
著者Opperman, D.J, Sewell, B.T, Litthauer, D, Isupov, M.N, Littlechild, J.A, van Heerden, E.
登録日2009-05-11
公開日2010-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a thermostable old yellow enzyme from Thermus scotoductus SA-01
Biochem.Biophys.Res.Commun., 393, 2010
3M00
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Crystal Structure of 5-epi-aristolochene synthase M4 mutant complexed with (2-cis,6-trans)-2-fluorofarnesyl diphosphate
分子名称: (2E,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Aristolochene synthase, MAGNESIUM ION
著者Noel, J.P, Dellas, N, Faraldos, J.A, Zhao, M, Hess Jr, B.A, Smentek, L, Coates, R.M, O'Maille, P.E.
登録日2010-03-02
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates.
Acs Chem.Biol., 5, 2010
3M0U
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Crystal Structure of the R21D mutant of alpha-spectrin SH3 domain. Hexagonal crystal obtained in sodium formate at pH 6.5.
分子名称: FORMIC ACID, Spectrin alpha chain, brain
著者Gavira, J.A, Camara-Artigas, A.
登録日2010-03-03
公開日2011-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Understanding the polymorphic behaviour of a mutant of the alpha-spectrin SH3 domain by means of two 1.1 A structures
Acta Crystallogr.,Sect.D, 2011

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