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PDB: 6622 results

6M40
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Crystal structure of the NS3-like helicase from Alongshan virus
Descriptor: NS3-like protein
Authors:Gao, X.P, Zhu, K.X, Chen, P, Wojdyla, J.A, Wang, M, Cui, S.
Deposit date:2020-03-05
Release date:2020-04-08
Last modified:2020-06-03
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal structure of the NS3-like helicase from Alongshan virus.
Iucrj, 7, 2020
6M7M
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rac-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Descriptor: L-GSTSTA from ice nucleation protein, inaZ, and its enantiomer, ...
Authors:Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
Deposit date:2018-08-20
Release date:2019-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
6N5F
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BU of 6n5f by Molmil
Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 3
Descriptor: Epoxide hydrolase TrEH, N-(8-amino-8-oxooctyl)nonanamide
Authors:Oliveira, G.S, Adriani, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S.
Deposit date:2018-11-21
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors.
Int. J. Biol. Macromol., 129, 2019
6N5G
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Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 2
Descriptor: 4-[(quinolin-3-yl)methyl]-N-[4-(trifluoromethoxy)phenyl]piperidine-1-carboxamide, Epoxide hydrolase TrEH
Authors:Oliveira, G.S, Adriani, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S.
Deposit date:2018-11-21
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors.
Int. J. Biol. Macromol., 129, 2019
6MS2
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Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis
Descriptor: CALCIUM ION, Glycoside Hydrolase Family 43
Authors:Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
Deposit date:2018-10-16
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
6ND7
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The crystal structure of TerB co-crystallized with polyporic acid
Descriptor: 2~3~,2~6~-dihydroxy[1~1~,2~1~:2~4~,3~1~-terphenyl]-2~2~,2~5~-dione, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2018-12-13
Release date:2019-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC
To Be Published
6NJS
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BU of 6njs by Molmil
Stat3 Core in complex with compound SD36
Descriptor: Signal transducer and activator of transcription 3, [(2-{[(5S,8S,10aR)-3-acetyl-8-({(2S)-5-amino-1-[(diphenylmethyl)amino]-1,5-dioxopentan-2-yl}carbamoyl)-6-oxodecahydropyrrolo[1,2-a][1,5]diazocin-5-yl]carbamoyl}-1H-indol-5-yl)(difluoro)methyl]phosphonic acid (non-preferred name)
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2019-01-04
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Potent and Selective Small-Molecule Degrader of STAT3 Achieves Complete Tumor Regression In Vivo.
Cancer Cell, 36, 2019
6NNC
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Structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and pemetrexed
Descriptor: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Chavez-Pacheco, S.M, Dias, M.V.B.
Deposit date:2019-01-14
Release date:2019-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates.
Acta Crystallogr D Struct Biol, 75, 2019
6NTB
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BU of 6ntb by Molmil
PII-like SbtB from Cyanobium sp PCC 7001 bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, SbtB7001, ...
Authors:Kaczmarski, J.A, Jackson, C.J.
Deposit date:2019-01-28
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of SbtB from Cyanobium sp. 7001
Biorxiv, 2019
6NY3
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BU of 6ny3 by Molmil
CasX ternary complex with 30bp target DNA
Descriptor: CasX, DNA Non-target strand, DNA target strand, ...
Authors:Liu, J.J, Orlova, N, Nogales, E, Doudna, J.A.
Deposit date:2019-02-10
Release date:2019-02-27
Last modified:2019-12-25
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:CasX enzymes comprise a distinct family of RNA-guided genome editors.
Nature, 566, 2019
1CWP
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BU of 1cwp by Molmil
STRUCTURES OF THE NATIVE AND SWOLLEN FORMS OF COWPEA CHLOROTIC MOTTLE VIRUS DETERMINED BY X-RAY CRYSTALLOGRAPHY AND CRYO-ELECTRON MICROSCOPY
Descriptor: Coat protein, RNA (5'-R(*AP*U)-3'), RNA (5'-R(*AP*UP*AP*U)-3')
Authors:Speir, J.A, Johnson, J.E, Munshi, S, Wang, G, Timothy, S, Baker, T.S.
Deposit date:1995-05-22
Release date:1995-05-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy.
Structure, 3, 1995
6NNH
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BU of 6nnh by Molmil
Structure of Closed state of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and cycloguanil
Descriptor: 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Giudice, J.H.P, Ribeiro, J.A, Dias, M.V.B.
Deposit date:2019-01-15
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.523 Å)
Cite:Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates.
Acta Crystallogr D Struct Biol, 75, 2019
6O12
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BU of 6o12 by Molmil
E. coli cysteine desulfurase SufS H123A
Descriptor: CHLORIDE ION, Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
Authors:Dunkle, J.A, Frantom, P.A.
Deposit date:2019-02-17
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues.
J.Biol.Chem., 294, 2019
1MDR
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BU of 1mdr by Molmil
THE ROLE OF LYSINE 166 IN THE MECHANISM OF MANDELATE RACEMASE FROM PSEUDOMONAS PUTIDA: MECHANISTIC AND CRYSTALLOGRAPHIC EVIDENCE FOR STEREOSPECIFIC ALKYLATION BY (R)-ALPHA-PHENYLGLYCIDATE
Descriptor: ATROLACTIC ACID (2-PHENYL-LACTIC ACID), MAGNESIUM ION, MANDELATE RACEMASE
Authors:Landro, J.A, Gerlt, J.A, Kozarich, J.W, Koo, C.W, Shah, V.J, Kenyon, G.L, Neidhart, D.J, Fujita, S, Petsko, G.A.
Deposit date:1993-11-19
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The role of lysine 166 in the mechanism of mandelate racemase from Pseudomonas putida: mechanistic and crystallographic evidence for stereospecific alkylation by (R)-alpha-phenylglycidate.
Biochemistry, 33, 1994
3CHM
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BU of 3chm by Molmil
Crystal structure of PCI domain from A. thaliana COP9 signalosome subunit 7 (CSN7)
Descriptor: ACETATE ION, COP9 signalosome complex subunit 7, MAGNESIUM ION
Authors:Dessau, M, Hirsch, J.A.
Deposit date:2008-03-10
Release date:2008-10-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Arabidopsis COP9 signalosome subunit 7 is a model PCI domain protein with subdomains involved in COP9 signalosome assembly
Plant Cell, 20, 2008
2QX4
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BU of 2qx4 by Molmil
Crystal Structure of Quinone Reductase II
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Calamini, B, Santarsiero, B.D, Boutin, J.A, Mesecar, A.D.
Deposit date:2007-08-10
Release date:2008-09-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2.
Biochem.J., 413, 2008
5LMX
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BU of 5lmx by Molmil
Monomeric RNA polymerase I at 4.9 A resolution
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Torreira, E, Louro, J.A, Gil-Carton, D, Gallego, O, Calvo, O, Fernandez-Tornero, C.
Deposit date:2016-08-02
Release date:2017-03-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:The dynamic assembly of distinct RNA polymerase I complexes modulates rDNA transcription.
Elife, 6, 2017
2QP2
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Structure of a MACPF/perforin-like protein
Descriptor: CALCIUM ION, Unknown protein
Authors:Rosado, C.J, Buckle, A.M, Law, R.H.P, Butcher, R.E, Kan, W.T, Bird, C.H, Ung, K, Browne, K.A, Baran, K, Bashtannyk-Puhalovich, T.A, Faux, N.G, Wong, W, Porter, C.J, Pike, R.N, Ellisdon, A.M, Pearce, M.C, Bottomley, S.P, Emsley, J, Smith, A.I, Rossjohn, J, Hartland, E.L, Voskoboinik, I, Trapani, J.A, Bird, P.I, Dunstone, M.A, Whisstock, J.C.
Deposit date:2007-07-22
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A common fold mediates vertebrate defense and bacterial attack
Science, 317, 2007
5LD9
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BU of 5ld9 by Molmil
Structure of deubiquitinating enzyme homolog, Pyrococcus furiosus JAMM1.
Descriptor: CHLORIDE ION, JAMM1, ZINC ION
Authors:Maupin-Furlow, J.A, Franzetti, B, Cao, S, Girard, E, Gabel, F, Engilberge, S.
Deposit date:2016-06-24
Release date:2017-05-17
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (1.733 Å)
Cite:Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases.
Structure, 25, 2017
2QJD
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BU of 2qjd by Molmil
Crystal Structure of Novel Immune-Type Receptor 10 Extracellular Fragment Mutant N30D
Descriptor: Novel immune-type receptor 10
Authors:Ostrov, D.A, Hernandez Prada, J.A, Haire, R.N, Cannon, J.P, Magis, A.T, Bailey, K.M, Litman, G.W.
Deposit date:2007-07-06
Release date:2008-06-17
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:A bony fish immunological receptor of the NITR multigene family mediates allogeneic recognition.
Immunity, 29, 2008
2QZ2
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BU of 2qz2 by Molmil
Crystal structure of a glycoside hydrolase family 11 xylanase from Aspergillus niger in complex with xylopentaose
Descriptor: Endo-1,4-beta-xylanase I, SODIUM ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Vandermarliere, E, Rombouts, S, Strelkov, S.V, Delcour, J.A, Courtin, C.M, Rabijns, A.
Deposit date:2007-08-16
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases.
Biochem.J., 410, 2008
2QFF
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BU of 2qff by Molmil
Crystal structure of Staphylococcal Complement Inhibitor
Descriptor: Hypothetical protein
Authors:Milder, F.J, Rooijakkers, S.H.M, Bardoel, B.W, Ruyken, M, Van Strijp, J.A.G, Gros, P.
Deposit date:2007-06-27
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Staphylococcal complement inhibitor: structure and active sites.
J.Immunol., 179, 2007
1WUE
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BU of 1wue by Molmil
Crystal structure of protein GI:29375081, unknown member of enolase superfamily from enterococcus faecalis V583
Descriptor: mandelate racemase/muconate lactonizing enzyme family protein
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Gerlt, J.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-05
Release date:2004-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family
Proc.Natl.Acad.Sci.USA, 111, 2014
1WEF
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Catalytic Domain Of Muty From Escherichia Coli K20A Mutant
Descriptor: A/G-specific adenine glycosylase, IRON/SULFUR CLUSTER
Authors:Hitomi, K, Arvai, A.S, Tainer, J.A.
Deposit date:2004-05-25
Release date:2004-09-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Reaction intermediates in the catalytic mechanism of Escherichia coli MutY DNA glycosylase
J.Biol.Chem., 279, 2004
1WEI
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BU of 1wei by Molmil
Catalytic Domain Of Muty From Escherichia Coli K20A Mutant Complexed To Adenine
Descriptor: 1,2-ETHANEDIOL, A/G-specific adenine glycosylase, ADENINE, ...
Authors:Hitomi, K, Arvai, A.S, Tainer, J.A.
Deposit date:2004-05-25
Release date:2004-09-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Reaction intermediates in the catalytic mechanism of Escherichia coli MutY DNA glycosylase
J.Biol.Chem., 279, 2004

222036

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