Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 6628 results

2VPT
DownloadVisualize
BU of 2vpt by Molmil
Clostridium thermocellum family 3 carbohydrate esterase
Descriptor: CALCIUM ION, LIPOLYTIC ENZYME
Authors:Correia, M.A.S, Prates, J.A.M, Bras, J, Fontes, C.M.G.A, Newman, J.A, Lewis, R.J, Gilbert, H.J, Flint, J.E.
Deposit date:2008-03-04
Release date:2008-05-06
Last modified:2012-01-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of a Cellulosomal Family 3 Carbohydrate Esterase from Clostridium Thermocellum Provides Insights Into the Mechanism of Substrate Recognition
J.Mol.Biol., 379, 2008
7PUS
DownloadVisualize
BU of 7pus by Molmil
ERK5 in complex with Pyrrole Carboxamide scaffold
Descriptor: 4-[3,6-bis(chloranyl)-2-fluoranyl-phenyl]carbonyl-~{N}-(1-methylpyrazol-4-yl)-1~{H}-pyrrole-2-carboxamide, Mitogen-activated protein kinase 7
Authors:Tucker, J.A, Martin, M.P, Endicott, J.A, Noble, M.E.N.
Deposit date:2021-09-30
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Parallel Optimization of Potency and Pharmacokinetics Leading to the Discovery of a Pyrrole Carboxamide ERK5 Kinase Domain Inhibitor.
J.Med.Chem., 65, 2022
5LZM
DownloadVisualize
BU of 5lzm by Molmil
COMPARISON OF THE CRYSTAL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME AT LOW, MEDIUM, AND HIGH IONIC STRENGTHS
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Bell, J.A, Wilson, K, Zhang, X.-J, Faber, H.R, Nicholson, H, Matthews, B.W.
Deposit date:1991-01-25
Release date:1992-07-15
Last modified:2021-06-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths.
Proteins, 10, 1991
6XKL
DownloadVisualize
BU of 6xkl by Molmil
SARS-CoV-2 HexaPro S One RBD up
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wrapp, D, Hsieh, C.-L, Goldsmith, J.A, McLellan, J.S.
Deposit date:2020-06-26
Release date:2020-07-15
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structure-based design of prefusion-stabilized SARS-CoV-2 spikes.
Science, 369, 2020
8PR7
DownloadVisualize
BU of 8pr7 by Molmil
Aurora-A in complex with CEP192 and an inhibitory monobody
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, Centrosomal protein of 192 kDa, ...
Authors:Miles, J.A, Bayliss, R.
Deposit date:2023-07-12
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Aurora-A in complex with CEP192 and an inhibitory monobody
To Be Published
8BMV
DownloadVisualize
BU of 8bmv by Molmil
Ligand binding domain of the P. Putida receptor McpH in complex with Uric acid
Descriptor: Methyl-accepting chemotaxis protein McpH, URIC ACID
Authors:Gavira, J.A, Krell, T, Fernandez, M, Martinez-Rodriguez, S.
Deposit date:2022-11-11
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Ubiquitous purine sensor modulates diverse signal transduction pathways in bacteria.
Nat Commun, 15, 2024
1A2S
DownloadVisualize
BU of 1a2s by Molmil
THE SOLUTION NMR STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGA MONORAPHIDIUM BRAUNII, MINIMIZED AVERAGE STRUCTURE
Descriptor: CYTOCHROME C6, HEME C
Authors:Banci, L, Bertini, I, De La Rosa, M.A, Koulougliotis, D, Navarro, J.A, Walter, O.
Deposit date:1998-01-10
Release date:1998-04-29
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of oxidized cytochrome c6 from the green alga Monoraphidium braunii.
Biochemistry, 37, 1998
154D
DownloadVisualize
BU of 154d by Molmil
DNA DISTORTION IN BIS-INTERCALATED COMPLEXES
Descriptor: BIS-(N-ETHYLPYRIDINIUM-(3-METHOXYCARBAZOLE))HEXANE-1,6-DIAMINE, DNA (5'-D(*(CBR)P*GP*CP*G)-3')
Authors:Peek, M.E, Lipscomb, L.A, Bertrand, J.A, Gao, Q, Roques, B.P, Garbay-Jaureguiberry, C, Williams, L.D.
Deposit date:1993-12-14
Release date:1994-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA distortion in bis-intercalated complexes.
Biochemistry, 33, 1994
8IJ6
DownloadVisualize
BU of 8ij6 by Molmil
Crystal structure of alcohol dehydrogenase from Burkholderia gladioli with NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative short-chain dehydrogenases/reductase family protein
Authors:Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
Deposit date:2023-02-26
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of alcohol dehydrogenase from Burkholderia gladioli with NADP
To Be Published
8IJ8
DownloadVisualize
BU of 8ij8 by Molmil
Crystal structure of alcohol dehydrogenase M4 mutant from Burkholderia gladioli
Descriptor: Putative short-chain dehydrogenases/reductase family protein
Authors:Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
Deposit date:2023-02-26
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of alcohol dehydrogenase M4 mutant from Burkholderia gladioli
To Be Published
8IJ7
DownloadVisualize
BU of 8ij7 by Molmil
Crystal structure of alcohol dehydrogenase from Burkholderia gladioli
Descriptor: Putative short-chain dehydrogenases/reductase family protein
Authors:Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
Deposit date:2023-02-26
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of alcohol dehydrogenase from Burkholderia gladioli
To Be Published
8IJG
DownloadVisualize
BU of 8ijg by Molmil
Crystal structure of alcohol dehydrogenase M5 from Burkholderia gladioli with NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative short-chain dehydrogenases/reductase family protein
Authors:Han, X, Mei, Z.L, Liu, W.D, Sun, Z.T, Ma, J.A.
Deposit date:2023-02-27
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of alcohol dehydrogenase from Burkholderia gladioli with NADP
To Be Published
4US3
DownloadVisualize
BU of 4us3 by Molmil
Crystal Structure of the bacterial NSS member MhsT in an Occluded Inward-Facing State
Descriptor: DODECYL-ALPHA-D-MALTOSIDE, SODIUM ION, TRANSPORTER, ...
Authors:Malinauskaite, L, Quick, M, Reinhard, L, Lyons, J.A, Yano, H, Javitch, J.A, Nissen, P.
Deposit date:2014-07-02
Release date:2014-09-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:A Mechanism for Intracellular Release of Na+ by Neurotransmitter/Sodium Symporters
Nat.Struct.Mol.Biol., 21, 2014
5KZN
DownloadVisualize
BU of 5kzn by Molmil
Metabotropic Glutamate Receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Metabotropic glutamate receptor 2
Authors:Chappell, M.D, Li, R, Smith, S.C, Dressman, B.A, Tromiczak, E.G, Tripp, A.E, Blanco, M.-J, Vetman, T, Quimby, S.J, Matt, J, Britton, T, Fivush, A.M, Schkeryantz, J.M, Mayhugh, D, Erickson, J.A, Bures, M, Jaramillo, C, Carpintero, M, de Diego, J.E, Barberis, M, Garcia-Cerrada, S, Soriano, J.F, Antonysamy, S, Atwell, S, MacEwan, I, Condon, B, Bradley, C, Wang, J, Zhang, A, Conners, K, Groshong, C, Wasserman, S.R, Koss, J.W, Witkin, J.M, Li, X, Overshiner, C, Wafford, K.A, Seidel, W, Wang, X.-S, Heinz, B.A, Swanson, S, Catlow, J, Bedwell, D, Monn, J.A, Mitch, C.H, Ornstein, P.
Deposit date:2016-07-25
Release date:2016-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of (1S,2R,3S,4S,5R,6R)-2-Amino-3-[(3,4-difluorophenyl)sulfanylmethyl]-4-hydroxy-bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid Hydrochloride (LY3020371HCl): A Potent, Metabotropic Glutamate 2/3 Receptor Antagonist with Antidepressant-Like Activity.
J. Med. Chem., 59, 2016
5KZQ
DownloadVisualize
BU of 5kzq by Molmil
Metabotropic Glutamate Receptor in complex with antagonist (1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2-azanyl-3-[[3,4-bis(fluoranyl)phenyl]sulfanylmethyl]-4-oxidanyl-bicyclo[3.1.0]hexane-2,6-dicarboxylic acid
Descriptor: (1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2-azanyl-3-[[3,4-bis(fluoranyl)phenyl]sulfanylmethyl]-4-oxidanyl-bicyclo[3.1.0]hexane-2,6-dicarboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 2
Authors:Chappell, M.D, Li, R, Smith, S.C, Dressman, B.A, Tromiczak, E.G, Tripp, A.E, Blanco, M.-J, Vetman, T, Quimby, S.J, Matt, J, Britton, T, Fivush, A.M, Schkeryantz, J.M, Mayhugh, D, Erickson, J.A, Bures, M, Jaramillo, C, Carpintero, M, de Diego, J.E, Barberis, M, Garcia-Cerrada, S, Soriano, J.F, Antonysamy, S, Atwell, S, MacEwan, I, Condon, B, Bradley, C, Wang, J, Zhang, A, Conners, K, Groshong, C, Wasserman, S.R, Koss, J.W, Witkin, J.M, Li, X, Overshiner, C, Wafford, K.A, Seidel, W, Wang, X.-S, Heinz, B.A, Swanson, S, Catlow, J, Bedwell, D, Monn, J.A, Mitch, C.H, Ornstein, P.
Deposit date:2016-07-25
Release date:2016-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of (1S,2R,3S,4S,5R,6R)-2-Amino-3-[(3,4-difluorophenyl)sulfanylmethyl]-4-hydroxy-bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid Hydrochloride (LY3020371HCl): A Potent, Metabotropic Glutamate 2/3 Receptor Antagonist with Antidepressant-Like Activity.
J. Med. Chem., 59, 2016
4UVD
DownloadVisualize
BU of 4uvd by Molmil
Discovery of pyrimidine isoxazoles InhA in complex with compound 6
Descriptor: 2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]-N-[(2Z)-5-[3-(trifluoromethyl)benzyl]-1,3-thiazol-2(3H)-ylidene]acetamide, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], MAGNESIUM ION, ...
Authors:Read, J.A, Gingell, H, Madhavapeddi, P, Ghorpade, S, Cowan, S.
Deposit date:2014-08-05
Release date:2015-09-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Hitting the Target in More Than One Way: Novel, Direct Inhibitors of Mycobacterium Tuberculosis Enoyl Acp Reductase
To be Published
4UVM
DownloadVisualize
BU of 4uvm by Molmil
In meso crystal structure of the POT family transporter PepTSo
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLUTATHIONE UPTAKE TRANSPORTER
Authors:Lyons, J.A, Solcan, N, Caffrey, M, Newstead, S.
Deposit date:2014-08-07
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Gating Topology of the Proton-Coupled Oligopeptide Symporters.
Structure, 23, 2015
4UV4
DownloadVisualize
BU of 4uv4 by Molmil
Crystal structure of anti-FPR Fpro0165 Fab fragment
Descriptor: FPRO0165 FAB
Authors:Douthwaite, J.A, Sridharan, S, Huntington, C, Marwood, R, Hammersley, J, Hakulinen, J.K, Ek, M, Sjogren, T, Rider, D, Privezentzev, C, Seaman, J.C, Cariuk, P, Knights, V, Young, J, Wilkinson, T, Sleeman, M, Finch, D.K, Lowe, D.C, Vaughan, T.J.
Deposit date:2014-08-04
Release date:2014-12-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Affinity Maturation of a Novel Antagonistic Human Monoclonal Antibody with a Long Vh Cdr3 Targeting the Class a Gpcr Formyl-Peptide Receptor 1.
Mabs, 7, 2015
4UVE
DownloadVisualize
BU of 4uve by Molmil
Discovery of pyrimidine isoxazoles InhA in complex with compound 9
Descriptor: 2-(4,6-DIMETHYLPYRIMIDIN-2-YL)SULFANYLETHANOL, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], MAGNESIUM ION, ...
Authors:Read, J.A, Gingell, H, Madhavapeddi, P, Ghorpade, S, Cowan, S.
Deposit date:2014-08-05
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Hitting the Target in More Than One Way: Novel, Direct Inhibitors of Mycobacterium Tuberculosis Enoyl Acp Reductase
To be Published
4UVG
DownloadVisualize
BU of 4uvg by Molmil
Discovery of pyrimidine isoxazoles InhA in complex with compound 15
Descriptor: 5-[(4,6-dimethylpyrimidin-2-yl)sulfanylmethyl]isoxazole-3-carboxamide, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], MAGNESIUM ION, ...
Authors:Read, J.A, Gingell, H, Madhavapeddi, P, Ghorpade, S, Cowan, S.
Deposit date:2014-08-05
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Hitting the Target in More Than One Way: Novel, Direct Inhibitors of Mycobacterium Tuberculosis Enoyl Acp Reductase
To be Published
5UU5
DownloadVisualize
BU of 5uu5 by Molmil
Bacteriophage P22 mature virion capsid protein
Descriptor: Major capsid protein
Authors:Hryc, C.F, Chen, D.-H, Afonine, P.V, Jakana, J, Wang, Z, Haase-Pettingell, C, Jiang, W, Adams, P.D, King, J.A, Schmid, M.F, Chiu, W.
Deposit date:2017-02-16
Release date:2017-03-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Accurate model annotation of a near-atomic resolution cryo-EM map.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UX0
DownloadVisualize
BU of 5ux0 by Molmil
X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA and target DNA
Descriptor: Argonaute protein, DNA (5'-D(P*AP*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*CP*C)-3'), RNA (5'-R(*G*GP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*AP*U)-3')
Authors:Doxzen, K.W, Doudna, J.A.
Deposit date:2017-02-21
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.197 Å)
Cite:DNA recognition by an RNA-guided bacterial Argonaute.
PLoS ONE, 12, 2017
5UP7
DownloadVisualize
BU of 5up7 by Molmil
Crystal Structure of the Ni-bound Human Heavy-Chain Ferritin 122H-delta C-star variant
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Bailey, J.B, Zhang, L, Chiong, J.A, Ahn, S, Tezcan, F.A.
Deposit date:2017-02-01
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Synthetic Modularity of Protein-Metal-Organic Frameworks.
J. Am. Chem. Soc., 139, 2017
5UYZ
DownloadVisualize
BU of 5uyz by Molmil
Structure of Human T-complex protein 1 subunit epsilon (CCT5) mutant His147Arg
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, T-complex protein 1 subunit epsilon
Authors:Pereira, J.H, McAndrew, R.P, Sergeeva, O.A, Ralston, C.Y, King, J.A, Adams, P.D.
Deposit date:2017-02-24
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of the human TRiC/CCT Subunit 5 associated with hereditary sensory neuropathy.
Sci Rep, 7, 2017
5UYX
DownloadVisualize
BU of 5uyx by Molmil
Structure of Human T-complex protein 1 subunit epsilon (CCT5)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, T-complex protein 1 subunit epsilon
Authors:Pereira, J.H, McAndrew, R.P, Sergeeva, O.A, Ralston, C.Y, King, J.A, Adams, P.D.
Deposit date:2017-02-24
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the human TRiC/CCT Subunit 5 associated with hereditary sensory neuropathy.
Sci Rep, 7, 2017

222926

数据于2024-07-24公开中

PDB statisticsPDBj update infoContact PDBjnumon