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PDB: 6628 件

6TY6
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Variant W229D/F290W-2 of the last common ancestor of Gram-negative bacteria beta-lactamase class A (GNCA4) bound to 5(6)-nitrobenzotriazole (TS-analog)
分子名称: 6-NITROBENZOTRIAZOLE, ACETATE ION, Beta lactamase (GNCA4-2), ...
著者Gavira, J.A, Risso, V, Sanchez-Ruiz, J.M, Romero-Rivera, A, Kamerlin, S.C.L, Ortega-Munoz, M, Santoyo-Gonzalez, F.
登録日2020-01-15
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enhancing ade novoenzyme activity by computationally-focused ultra-low-throughput screening.
Chem Sci, 11, 2020
6U9M
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MLL1 SET N3861I/Q3867L bound to inhibitor 16 (TC-5109)
分子名称: 5'-{[(3S)-3-amino-3-carboxypropyl]({1-[(thiophen-2-yl)methyl]azetidin-3-yl}methyl)amino}-5'-deoxyadenosine, GLYCEROL, Histone-lysine N-methyltransferase, ...
著者Petrunak, E.M, Stuckey, J.A.
登録日2019-09-09
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of Potent Small-Molecule Inhibitors of MLL Methyltransferase.
Acs Med.Chem.Lett., 11, 2020
6U8D
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Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2
分子名称: Heavy chain of Fab HCV2, JIIIabc RNA (68-MER), Light chain of Fab HCV2
著者Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
登録日2019-09-04
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.807 Å)
主引用文献Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
5O4V
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BU of 5o4v by Molmil
P.vivax NMT with aminomethylindazole and quinoline inhibitors bound
分子名称: 1-[5-(4-fluoranyl-2-methyl-phenyl)-1~{H}-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine, 2-oxopentadecyl-CoA, CHLORIDE ION, ...
著者Brannigan, J.A, Wilkinson, A.J.
登録日2017-05-31
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fragment-derived inhibitors of human N-myristoyltransferase block capsid assembly and replication of the common cold virus.
Nat Chem, 10, 2018
7R9V
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BU of 7r9v by Molmil
Structure of PIK3CA with covalent inhibitor 19
分子名称: N-[2-(4-{4-[2-amino-4-(difluoromethyl)pyrimidin-5-yl]-6-(morpholin-4-yl)-1,3,5-triazin-2-yl}piperazin-1-yl)-2-oxoethyl]-1-(prop-2-enoyl)piperidine-4-carboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Burke, J.E, McPhail, J.A.
登録日2021-06-29
公開日2022-04-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Covalent Proximity Scanning of a Distal Cysteine to Target PI3K alpha.
J.Am.Chem.Soc., 144, 2022
7R9Y
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Structure of PIK3CA with covalent inhibitor 22
分子名称: N-[2-(4-{4-[2-amino-4-(difluoromethyl)pyrimidin-5-yl]-6-(morpholin-4-yl)-1,3,5-triazin-2-yl}piperazin-1-yl)-2-oxoethyl]-N-methyl-1-(prop-2-enoyl)piperidine-4-carboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Burke, J.E, McPhail, J.A.
登録日2021-06-29
公開日2022-04-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Covalent Proximity Scanning of a Distal Cysteine to Target PI3K alpha.
J.Am.Chem.Soc., 144, 2022
7R51
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Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp
分子名称: ARG-ASP, Asp/Glu-specific dipeptidyl-peptidase
著者Tham, C.T, Coker, J.A, Foster, W.R, Ohara-Nemoto, Y, Nemoto, T.K, Yue, W.W, Bountra, C, Bezerra, G.A.
登録日2022-02-09
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.808 Å)
主引用文献Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp
To Be Published
6UOP
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OsPYL/RCAR5 (24 - 29) solved by nanobeam diffraction tomography
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.351 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOR
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BU of 6uor by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 3 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOU
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BU of 6uou by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 9 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.04 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UUR
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BU of 6uur by Molmil
Human prion protein fibril, M129 variant
分子名称: Major prion protein
著者Glynn, C, Sawaya, M.R, Ge, P, Zhou, Z.H, Rodriguez, J.A.
登録日2019-10-31
公開日2020-04-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core.
Nat.Struct.Mol.Biol., 27, 2020
6UVJ
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Cocrystal of BRD4(D1) with a methyl carbamate thiazepane inhibitor
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, ...
著者Johnson, J.A, Pomerantz, W.C.K.
登録日2019-11-02
公開日2020-01-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
6UOQ
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OsPYL/RCAR5 residues 24-29 solved from electron diffraction stills
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.007 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
7R0T
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BU of 7r0t by Molmil
Crystal structure of exonuclease ExnV1
分子名称: CHLORIDE ION, Exonuclease ExnV1, MAGNESIUM ION, ...
著者Welin, M, Svensson, A, Hakansson, M, Al-Karadaghi, S, Jasilionis, A, Linares-Pasten, J.A, Wang, L, Nordberg Karlsson, E, Ahlqvist, J.
登録日2022-02-02
公開日2022-11-02
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Crystal structure of DNA polymerase I from Thermus phage G20c.
Acta Crystallogr D Struct Biol, 78, 2022
7R0K
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BU of 7r0k by Molmil
Crystal structure of Polymerase I from phage G20c
分子名称: DNA polymerase I
著者Welin, M, Svensson, A, Hakansson, M, Al-Karadaghi, S, Linares-Pasten, J.A, Jasilionis, A, Nordberg Karlsson, E, Ahlqvist, J.
登録日2022-02-02
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.972 Å)
主引用文献Crystal structure of DNA polymerase I from Thermus phage G20c.
Acta Crystallogr D Struct Biol, 78, 2022
7RRN
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BU of 7rrn by Molmil
E. coli cysteine desulfurase SufS R56A
分子名称: CHLORIDE ION, Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
著者Dunkle, J.A, Gogar, R, Frantom, P.A.
登録日2021-08-10
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Contributions of the active site floor in cysteine desulfurase activity
To be published
6UPS
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BU of 6ups by Molmil
Crystal structure of the deubiquitylase domain from the Orientia tsutsugamushi protein OTT_1962 (OtDUB)
分子名称: ULP_PROTEASE domain-containing protein
著者Ronau, J.A, Lim, C.S, Xiong, Y.
登録日2019-10-18
公開日2020-04-01
最終更新日2021-04-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A deubiquitylase with an unusually high-affinity ubiquitin-binding domain from the scrub typhus pathogen Orientia tsutsugamushi.
Nat Commun, 11, 2020
6UPU
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Crystal structure of the Orientia tsutsugamushi OtDUB in complex with three molecules of ubiquitin
分子名称: ULP_PROTEASE domain-containing protein, Ubiquitin
著者Lim, C.S, Ronau, J.A, Xiong, Y.
登録日2019-10-18
公開日2020-04-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A deubiquitylase with an unusually high-affinity ubiquitin-binding domain from the scrub typhus pathogen Orientia tsutsugamushi.
Nat Commun, 11, 2020
7S65
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Compressed conformation of nighttime state KaiC
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, ...
著者Sandate, C.R, Swan, J.A, Partch, C.L, Lander, G.C.
登録日2021-09-13
公開日2021-09-22
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Coupling of distant ATPase domains in the circadian clock protein KaiC.
Nat.Struct.Mol.Biol., 29, 2022
7S67
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BU of 7s67 by Molmil
Extended conformation of daytime state KaiC
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, ...
著者Sandate, C.R, Swan, J.A, Partch, C.L, Lander, G.C.
登録日2021-09-13
公開日2021-09-22
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Coupling of distant ATPase domains in the circadian clock protein KaiC.
Nat.Struct.Mol.Biol., 29, 2022
7S66
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BU of 7s66 by Molmil
Extended conformation of nighttime state KaiC
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION
著者Sandate, C.R, Swan, J.A, Partch, C.L, Lander, G.C.
登録日2021-09-13
公開日2021-09-22
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Coupling of distant ATPase domains in the circadian clock protein KaiC.
Nat.Struct.Mol.Biol., 29, 2022
7RWT
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BU of 7rwt by Molmil
Adeno-associated virus type 2
分子名称: Capsid protein VP1
著者Hull, J.A, Mietzsch, M, Chipman, P, Strugatsky, D, McKenna, R.
登録日2021-08-20
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Structural characterization of an envelope-associated adeno-associated virus type 2 capsid.
Virology, 565, 2021
7RWL
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Envelope-associated Adeno-associated virus serotype 2
分子名称: Capsid protein VP1
著者Hull, J.A, Mietzsch, M, Chipman, P, Strugatsky, D, McKenna, R.
登録日2021-08-20
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural characterization of an envelope-associated adeno-associated virus type 2 capsid.
Virology, 565, 2021
7S3N
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BU of 7s3n by Molmil
SARS-CoV-2 S stem helix peptide bound to Fab22
分子名称: Fab22 Heavy Chain, Fab22 Light Chain, Spike glycoprotein
著者Goldsmith, J.A, McLellan, J.S.
登録日2021-09-07
公開日2021-10-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Stabilized coronavirus spike stem elicits a broadly protective antibody.
Cell Rep, 37, 2021
7S3M
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MERS-CoV S stem helix peptide bound to Fab22
分子名称: Fab22 Heavy Chain, Fab22 Light Chain, Spike glycoprotein
著者Goldsmith, J.A, McLellan, J.S.
登録日2021-09-07
公開日2021-10-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Stabilized coronavirus spike stem elicits a broadly protective antibody.
Cell Rep, 37, 2021

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