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PDB: 42550 results

6I3R
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Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1/2 of Drosophila helicase MLE
Descriptor: Dosage compensation regulator
Authors:Jagtap, P.K.A, Buelow, S.v, Masiewicz, P, Simon, B, Hennig, J.
Deposit date:2018-11-07
Release date:2019-02-20
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1,2 of Drosophila helicase Maleless.
Nucleic Acids Res., 47, 2019
5KKI
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BU of 5kki by Molmil
1.7-Angstrom in situ Mylar structure of hen egg-white lysozyme (HEWL) at 100 K
Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ACETIC ACID, CHLORIDE ION, ...
Authors:Broecker, J, Ernst, O.P.
Deposit date:2016-06-21
Release date:2017-02-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Versatile System for High-Throughput In Situ X-ray Screening and Data Collection of Soluble and Membrane-Protein Crystals.
Cryst Growth Des, 16, 2016
5KQG
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BU of 5kqg by Molmil
Co-crystal structure of LMW-PTP in complex with 2-(benzothiazol-2-ylamino)-2-oxo-1-phenylethanesulfonic acid
Descriptor: (1~{S})-2-(1,3-benzothiazol-2-ylamino)-2-oxidanylidene-1-phenyl-ethanesulfonic acid, Low molecular weight phosphotyrosine protein phosphatase
Authors:Wang, J, Zhang, Z.-Y, Yu, Z.-H.
Deposit date:2016-07-06
Release date:2016-10-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibition of low molecular weight protein tyrosine phosphatase by an induced-fit mechanism.
J.Med.Chem., 2016
5KQT
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Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
Descriptor: 4-aminoburyrate transaminase, CHLORIDE ION, GLYCEROL, ...
Authors:Wilding, M, Newman, J, Peat, T.S, Scott, C.
Deposit date:2016-07-06
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017
6IYB
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BU of 6iyb by Molmil
Structure of human ORP1 ANK - Rab7 complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Oxysterol-binding protein-related protein 1, ...
Authors:Tong, J, Im, Y.J.
Deposit date:2018-12-14
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.091 Å)
Cite:Structural basis of human ORP1-Rab7 interaction for the late-endosome and lysosome targeting.
PLoS ONE, 14, 2019
6IYO
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BU of 6iyo by Molmil
Crystal Structure of the acyltransferase domain from the second module of the salinomycin polyketide synthase
Descriptor: Type I modular polyketide synthase
Authors:Zhang, F, Zheng, J.
Deposit date:2018-12-17
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights into the Substrate Specificity of Acyltransferases from Salinomycin Polyketide Synthase.
Biochemistry, 58, 2019
6IX8
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BU of 6ix8 by Molmil
The structure of LepI C52A in complex with SAM and its substrate analogue
Descriptor: (1R,2R,4aS,8S,8aR)-2,8-dimethyl-5'-phenyl-4a,5,6,7,8,8a-hexahydro-2H,2'H-spiro[naphthalene-1,3'-pyridine]-2',4'(1'H)-dione, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
Deposit date:2018-12-09
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
5KRJ
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Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with an a-naphthyl Substituted OBHS derivative
Descriptor: Estrogen receptor, NCOA2, naphthalen-1-yl (1~{S},2~{R},4~{S})-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate
Authors:Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-07-07
Release date:2017-01-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
6J0U
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BU of 6j0u by Molmil
Crystal Structure of the acyltransferase domain from the third module of the ansamitocin polyketide synthase
Descriptor: PHOSPHATE ION, Type 1 modular polyketide synthase
Authors:Zhang, F, Zheng, J.
Deposit date:2018-12-26
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural and Biochemical Insight into the Recruitment of Acyl Carrier Protein-Linked Extender Units in Ansamitocin Biosynthesis.
Chembiochem, 21, 2020
6J18
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BU of 6j18 by Molmil
ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ESX-5 secretion system protein EccC5, MAGNESIUM ION
Authors:Wang, S.H, Li, J, Rao, Z.H.
Deposit date:2018-12-28
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into substrate recognition by the type VII secretion system.
Protein Cell, 11, 2020
5KSQ
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BU of 5ksq by Molmil
Stationary phase survival protein E (SurE) from Xylella fastidiosa
Descriptor: 5'-nucleotidase SurE, IODIDE ION, MANGANESE (II) ION, ...
Authors:Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, M.A, Polikarpov, I, De Souza, A.P, Aparicio, R, Iulek, J.
Deposit date:2016-07-09
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
2TSR
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BU of 2tsr by Molmil
THYMIDYLATE SYNTHASE FROM RAT IN TERNARY COMPLEX WITH DUMP AND TOMUDEX
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE, TOMUDEX
Authors:Sotelo-Mundo, R.R, Ciesla, J, Dzik, J.M, Rode, W, Maley, F, Maley, G, Hardy, L.W, Montfort, W.R.
Deposit date:1998-06-19
Release date:1999-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of rat thymidylate synthase inhibited by Tomudex, a potent anticancer drug.
Biochemistry, 38, 1999
2RKB
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BU of 2rkb by Molmil
Serine dehydratase like-1 from human cancer cells
Descriptor: POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE, Serine dehydratase-like
Authors:Yamada, T, Komoto, J, Kasuya, T, Mori, H, Ogawa, H, Takusagawa, F.
Deposit date:2007-10-16
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A catalytic mechanism that explains a low catalytic activity of serine dehydratase like-1 from human cancer cells: Crystal structure and site-directed mutagenesis studies.
Biochim.Biophys.Acta, 1780, 2008
2R5S
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BU of 2r5s by Molmil
The crystal structure of a domain of protein VP0806 (unknown function) from Vibrio parahaemolyticus RIMD 2210633
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Tan, K, Wu, R, Abdullah, J, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-04
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The crystal structure of a domain of protein VP0806 (unknown function) from Vibrio parahaemolyticus RIMD 2210633.
To be Published
2R64
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BU of 2r64 by Molmil
Crystal structure of a 3-aminoindazole compound with CDK2
Descriptor: Cell division protein kinase 2, N-[5-(1,1-DIOXIDOISOTHIAZOLIDIN-2-YL)-1H-INDAZOL-3-YL]-2-(4-PIPERIDIN-1-YLPHENYL)ACETAMIDE
Authors:Lee, J, Choi, H, Kim, K.H, Jeong, S, Park, J.W, Baek, C.S, Lee, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis and biological evaluation of 3,5-diaminoindazoles as cyclin-dependent kinase inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
6J0W
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BU of 6j0w by Molmil
Crystal Structure of Yeast Rtt107 and Nse6
Descriptor: Peptide from DNA repair protein KRE29, Regulator of Ty1 transposition protein 107
Authors:Wan, B, Wu, J, Lei, M.
Deposit date:2018-12-27
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular Basis for Control of Diverse Genome Stability Factors by the Multi-BRCT Scaffold Rtt107.
Mol.Cell, 75, 2019
6J19
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BU of 6j19 by Molmil
ATPase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ESAT-6-like protein EsxB, ESX-1 secretion system protein EccCb1, ...
Authors:Wang, S.H, Li, J, Rao, Z.H.
Deposit date:2018-12-28
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Structural insights into substrate recognition by the type VII secretion system.
Protein Cell, 11, 2020
5L4M
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BU of 5l4m by Molmil
Crystal Structure of Human Transthyretin in Complex with 3,5,6-Trichloro-2-pyridinyloxyacetic acid (Triclopyr)
Descriptor: SODIUM ION, Transthyretin, Triclopyr
Authors:Grundstrom, C, Hall, M, Zhang, J, Olofsson, A, Andersson, P, Sauer-Eriksson, A.E.
Deposit date:2016-05-25
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.581 Å)
Cite:Structure-Based Virtual Screening Protocol for in Silico Identification of Potential Thyroid Disrupting Chemicals Targeting Transthyretin.
Environ. Sci. Technol., 50, 2016
2R9I
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BU of 2r9i by Molmil
Crystal structure of putative phage capsid protein domain from Corynebacterium diphtheriae
Descriptor: Putative phage capsid protein
Authors:Wu, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-12
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of putative phage capsid protein domain from Corynebacterium diphtheriae.
To be Published
6J6G
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BU of 6j6g by Molmil
Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom
Descriptor: ACT1 pre-mRNA, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Wan, R, Bai, R, Yan, C, Lei, J, Shi, Y.
Deposit date:2019-01-15
Release date:2019-04-24
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching.
Cell, 177, 2019
1IKY
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BU of 1iky by Molmil
HIV-1 Reverse Transcriptase in Complex with the Inhibitor MSC194
Descriptor: 1-[2-(3-ACETYL-2-HYDROXY-6-METHOXY-PHENYL)-CYCLOPROPYL]-3-(5-CYANO-PYRIDIN-2-YL)-THIOUREA, POL POLYPROTEIN
Authors:Lindberg, J, Unge, T.
Deposit date:2001-05-07
Release date:2001-06-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the inhibitory efficacy of efavirenz (DMP-266), MSC194 and PNU142721 towards the HIV-1 RT K103N mutant.
Eur.J.Biochem., 269, 2002
5KYN
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BU of 5kyn by Molmil
Structure of Sec23 and TANGO1 complex
Descriptor: Melanoma inhibitory activity protein 3, Protein transport protein Sec23A, ZINC ION
Authors:Ma, W, Goldberg, J.
Deposit date:2016-07-21
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
6JBF
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BU of 6jbf by Molmil
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)
Descriptor: (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-galactopyranoside, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kanazawa, H, Auffinger, P, Hanessian, S, Kondo, J.
Deposit date:2019-01-25
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)
To Be Published
6IYT
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BU of 6iyt by Molmil
Crystal Structure of the acyltransferase domain from second module 14 of salinomycin polyketide synthase
Descriptor: Type I modular polyketide synthase
Authors:Zhang, F, Zheng, J.
Deposit date:2018-12-17
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Insights into the Substrate Specificity of Acyltransferases from Salinomycin Polyketide Synthase.
Biochemistry, 58, 2019
5L76
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BU of 5l76 by Molmil
Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain (in apo form)
Descriptor: 1,2-ETHANEDIOL, Alpha-aminoadipic semialdehyde synthase, mitochondrial, ...
Authors:Kopec, J, Pena, I.A, Rembeza, E, Strain-Damerell, C, Chalk, R, Borkowska, O, Goubin, S, Velupillai, S, Burgess-Brown, N, Arrowsmith, C, Edwards, A, Bountra, C, Arruda, P, Yue, W.W.
Deposit date:2016-06-02
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of human aminoadipate semialdehyde synthase, saccharopine dehydrogenase domain (in apo form)
To Be Published

224004

數據於2024-08-21公開中

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