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PDB: 42254 results

8REV
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BU of 8rev by Molmil
Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase CHL1, DNA (46-MER), ...
Authors:Kuper, J, Hove, T, Kisker, C.
Deposit date:2023-12-12
Release date:2024-05-29
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:XPD stalled on cross-linked DNA provides insight into damage verification.
Nat.Struct.Mol.Biol., 2024
3UHL
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BU of 3uhl by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with p2-NC substrate analog
Descriptor: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, Protease, SULFATE ION
Authors:Agniswamy, J, Chen-Hsiang, S, Weber, I.
Deposit date:2011-11-03
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:HIV-1 protease with 20 mutations exhibits extreme resistance to clinical inhibitors through coordinated structural rearrangements.
Biochemistry, 51, 2012
3UII
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BU of 3uii by Molmil
crystal structure of human Survivin in complex with H3(1-10) peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, ZINC ION, histone H3(1-10) peptide
Authors:Du, J, Patel, D.J.
Deposit date:2011-11-04
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
5DHU
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BU of 5dhu by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
Descriptor: 5'-azido-5'-deoxy-8-[(2-{[2-(1H-indol-3-yl)ethyl]amino}-2-oxoethyl)sulfanyl]adenosine, CITRIC ACID, GLYCEROL, ...
Authors:Gelin, M, Paoletti, J, Assairi, L, Huteau, V, Pochet, S, Labesse, G.
Deposit date:2015-08-31
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:8-Thioalkyl-adenosine derivatives inhibit Listeria monocytogenes NAD kinase through a novel binding mode.
Eur.J.Med.Chem., 124, 2016
3UPY
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BU of 3upy by Molmil
Crystal structure of the Brucella abortus enzyme catalyzing the first committed step of the methylerythritol 4-phosphate pathway.
Descriptor: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID, MAGNESIUM ION, Oxidoreductase
Authors:Calisto, B.M, Perez-Gil, J, Fita, I, Rodriguez-Concepcion, M.
Deposit date:2011-11-18
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Brucella abortus deoxyxylulose-5-phosphate reductoisomerase-like (DRL) enzyme involved in isoprenoid biosynthesis.
J.Biol.Chem., 287, 2012
3UN6
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BU of 3un6 by Molmil
2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound
Descriptor: ABC transporter substrate-binding protein, PHOSPHATE ION, ZINC ION
Authors:Minasov, G, Wawrzak, Z, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Kiryukhina, O, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-11-15
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound.
TO BE PUBLISHED
3UUG
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BU of 3uug by Molmil
Crystal structure of the periplasmic sugar binding protein ChvE
Descriptor: Multiple sugar-binding periplasmic receptor ChvE, beta-D-glucopyranuronic acid
Authors:Hu, X, Zhao, J, Binns, A, Degrado, W.
Deposit date:2011-11-28
Release date:2012-11-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Agrobacterium tumefaciens recognizes its host environment using ChvE to bind diverse plant sugars as virulence signals.
Proc.Natl.Acad.Sci.USA, 110, 2013
8RSA
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BU of 8rsa by Molmil
CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A
Descriptor: 3'-DEOXY-3'-ACETAMIDO-THYMIDINE, RIBONUCLEASE A
Authors:Nachman, J, Wlodawer, A.
Deposit date:1989-08-28
Release date:1991-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of two covalent nucleoside derivatives of ribonuclease A.
Biochemistry, 29, 1990
3URM
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BU of 3urm by Molmil
Crystal structure of the periplasmic sugar binding protein ChvE
Descriptor: Multiple sugar-binding periplasmic receptor ChvE, beta-D-galactopyranose
Authors:Hu, X, Zhao, J, Binns, A, Degrado, W.
Deposit date:2011-11-22
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Agrobacterium tumefaciens recognizes its host environment using ChvE to bind diverse plant sugars as virulence signals.
Proc.Natl.Acad.Sci.USA, 110, 2013
3USL
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BU of 3usl by Molmil
Crystal Structure of LeuT bound to L-selenomethionine in space group C2 from lipid bicelles
Descriptor: ACETATE ION, IODIDE ION, PHOSPHOCHOLINE, ...
Authors:Wang, H, Elferich, J, Gouaux, E.
Deposit date:2011-11-23
Release date:2012-01-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Nat.Struct.Mol.Biol., 19, 2012
3USU
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BU of 3usu by Molmil
Crystal structure of Butea monosperma seed lectin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Abhilash, J, Geethanandan, K, Bharath, S.R, Sadasivan, C, Haridas, M.
Deposit date:2011-11-24
Release date:2012-01-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of Butea monosperma seed lectin
To be Published
3V05
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BU of 3v05 by Molmil
2.4 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus.
Descriptor: CHLORIDE ION, Superantigen-like Protein
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Filippova, E.V, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-12-07
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:2.4 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus.
TO BE PUBLISHED
8RH1
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BU of 8rh1 by Molmil
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
8S6E
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BU of 8s6e by Molmil
Monoclonal antibody MenW targeting serogroup W of Neisseria meningitidis
Descriptor: MenW.01 Heavy chain, MenW.01 Light chain, SODIUM ION
Authors:Pietri, G.P, Bertuzzi, S, Karnicar, K, Unione, L, Lisnic, B, Malic, S, Miklic, K, Novak, M, Calloni, I, Santini, L, Usenik, A, Rosaria Romano, M, Adamo, R, Jonjic, S, Turk, D, Jimenez-Barbero, J, Lenac Rovis, T.
Deposit date:2024-02-27
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Antigenic determinants driving serogroup-specific antibody response to Neisseria meningitidis C, W, and Y capsular polysaccharides: Insights for rational vaccine design.
Carbohydr Polym, 341, 2024
5DGG
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BU of 5dgg by Molmil
Central domain of uncharacterized Lpg1148 protein from Legionella pneumophila
Descriptor: CHLORIDE ION, Uncharacterized protein
Authors:Osipiuk, J, Evdokimova, E, Yim, V, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-08-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol. Syst. Biol., 12, 2016
5DF7
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BU of 5df7 by Molmil
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH AZLOCILLIN
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxo-1-{[(2R)-2-{[(2-oxoimidazolidin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}ethyl]-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, Cell division protein, ...
Authors:Ren, J, Nettleship, J.E, Males, A, Stuart, D.I, Owens, R.J.
Deposit date:2015-08-26
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of penicillin-binding protein 3 in complexes with azlocillin and cefoperazone in both acylated and deacylated forms.
Febs Lett., 590, 2016
3UWB
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BU of 3uwb by Molmil
Crystal structure of a probable peptide deformylase from strucynechococcus phage S-SSM7 in complex with actinonin
Descriptor: 1,2-ETHANEDIOL, ACTINONIN, CHLORIDE ION, ...
Authors:Lorimer, D, Abendroth, J, Edwards, T.E, Burgin, A, Segall, A, Rohwer, F.
Deposit date:2011-12-01
Release date:2013-01-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
8RH2
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BU of 8rh2 by Molmil
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT102 Fab heavy chain, HDIT102 Fab light chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
3UXW
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BU of 3uxw by Molmil
Crystal Structures of an A-T-hook/DNA complex
Descriptor: A-T hook peptide, dodecamer DNA
Authors:Fonfria-Subiros, E, Acosta-Reyes, F.J, Saperas, N, Pous, J, Subirana, J.A, Campos, J.L.
Deposit date:2011-12-05
Release date:2012-05-23
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of a complex of DNA with one AT-hook of HMGA1.
Plos One, 7, 2012
5DHQ
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BU of 5dhq by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
Descriptor: 8-[(2-{[2-(3-bromophenyl)ethyl]amino}-2-oxoethyl)sulfanyl]adenosine, CITRIC ACID, GLYCEROL, ...
Authors:Gelin, M, Paoletti, J, Assairi, L, Huteau, V, Pochet, S, Labesse, G.
Deposit date:2015-08-31
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:8-Thioalkyl-adenosine derivatives inhibit Listeria monocytogenes NAD kinase through a novel binding mode.
Eur.J.Med.Chem., 124, 2016
8RGZ
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BU of 8rgz by Molmil
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
3V16
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BU of 3v16 by Molmil
An intramolecular pi-cation latch in phosphatidylinositol-specific phospholipase C from S.aureus controls substrate access to the active site
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase, CHLORIDE ION
Authors:Goldstein, R.I, Cheng, J, Stec, B, Roberts, M.F.
Deposit date:2011-12-09
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the S. aureus PI-Specific Phospholipase C Reveals Modulation of Active Site Access by a Titratable PI-Cation Latched Loop
Biochemistry, 51, 2012
5DIN
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BU of 5din by Molmil
Structural Basis for the Indispensable Role of a Unique Zinc Finger Motif in LNX2 Ubiquitination
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ligand of Numb protein X 2, ZINC ION
Authors:Sivaraman, J, Nayak, D.
Deposit date:2015-09-01
Release date:2015-10-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.864 Å)
Cite:Structural basis for the indispensable role of a unique zinc finger motif in LNX2 ubiquitination.
Oncotarget, 6, 2015
3V18
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BU of 3v18 by Molmil
Structure of the Phosphatidylinositol-specific phospholipase C from Staphylococcus aureus
Descriptor: 1-phosphatidylinositol phosphodiesterase, ISOPROPYL ALCOHOL, SULFATE ION
Authors:Goldstein, R.I, Cheng, J, Stec, B, Roberts, M.F.
Deposit date:2011-12-09
Release date:2012-04-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure of the S. aureus PI-Specific Phospholipase C Reveals Modulation of Active Site Access by a Titratable PI-Cation Latched Loop
Biochemistry, 51, 2012
5DGU
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BU of 5dgu by Molmil
Crystal Structure of HIV-1 Protease Inhibitors Containing Substituted fused-Tetrahydropyranyl Tetrahydrofuran as P2-Ligand GRL-004-11A
Descriptor: (3R,3aR,4S,7aS)-3-methoxyhexahydro-4H-furo[2,3-b]pyran-4-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
Authors:Agniswamy, J, Wang, Y.-F, Weber, I.T.
Deposit date:2015-08-28
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Design, synthesis, biological evaluation and X-ray structural studies of HIV-1 protease inhibitors containing substituted fused-tetrahydropyranyl tetrahydrofuran as P2-ligands.
Org.Biomol.Chem., 13, 2015

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数据于2024-07-10公开中

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