Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42254 件

8REV
DownloadVisualize
BU of 8rev by Molmil
Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase CHL1, DNA (46-MER), ...
著者Kuper, J, Hove, T, Kisker, C.
登録日2023-12-12
公開日2024-05-29
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献XPD stalled on cross-linked DNA provides insight into damage verification.
Nat.Struct.Mol.Biol., 2024
3UHL
DownloadVisualize
BU of 3uhl by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with p2-NC substrate analog
分子名称: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, Protease, SULFATE ION
著者Agniswamy, J, Chen-Hsiang, S, Weber, I.
登録日2011-11-03
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献HIV-1 protease with 20 mutations exhibits extreme resistance to clinical inhibitors through coordinated structural rearrangements.
Biochemistry, 51, 2012
3UII
DownloadVisualize
BU of 3uii by Molmil
crystal structure of human Survivin in complex with H3(1-10) peptide
分子名称: Baculoviral IAP repeat-containing protein 5, ZINC ION, histone H3(1-10) peptide
著者Du, J, Patel, D.J.
登録日2011-11-04
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
5DHU
DownloadVisualize
BU of 5dhu by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
分子名称: 5'-azido-5'-deoxy-8-[(2-{[2-(1H-indol-3-yl)ethyl]amino}-2-oxoethyl)sulfanyl]adenosine, CITRIC ACID, GLYCEROL, ...
著者Gelin, M, Paoletti, J, Assairi, L, Huteau, V, Pochet, S, Labesse, G.
登録日2015-08-31
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献8-Thioalkyl-adenosine derivatives inhibit Listeria monocytogenes NAD kinase through a novel binding mode.
Eur.J.Med.Chem., 124, 2016
3UPY
DownloadVisualize
BU of 3upy by Molmil
Crystal structure of the Brucella abortus enzyme catalyzing the first committed step of the methylerythritol 4-phosphate pathway.
分子名称: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID, MAGNESIUM ION, Oxidoreductase
著者Calisto, B.M, Perez-Gil, J, Fita, I, Rodriguez-Concepcion, M.
登録日2011-11-18
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Brucella abortus deoxyxylulose-5-phosphate reductoisomerase-like (DRL) enzyme involved in isoprenoid biosynthesis.
J.Biol.Chem., 287, 2012
3UN6
DownloadVisualize
BU of 3un6 by Molmil
2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound
分子名称: ABC transporter substrate-binding protein, PHOSPHATE ION, ZINC ION
著者Minasov, G, Wawrzak, Z, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Kiryukhina, O, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-11-15
公開日2011-12-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound.
TO BE PUBLISHED
3UUG
DownloadVisualize
BU of 3uug by Molmil
Crystal structure of the periplasmic sugar binding protein ChvE
分子名称: Multiple sugar-binding periplasmic receptor ChvE, beta-D-glucopyranuronic acid
著者Hu, X, Zhao, J, Binns, A, Degrado, W.
登録日2011-11-28
公開日2012-11-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Agrobacterium tumefaciens recognizes its host environment using ChvE to bind diverse plant sugars as virulence signals.
Proc.Natl.Acad.Sci.USA, 110, 2013
8RSA
DownloadVisualize
BU of 8rsa by Molmil
CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A
分子名称: 3'-DEOXY-3'-ACETAMIDO-THYMIDINE, RIBONUCLEASE A
著者Nachman, J, Wlodawer, A.
登録日1989-08-28
公開日1991-04-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of two covalent nucleoside derivatives of ribonuclease A.
Biochemistry, 29, 1990
3URM
DownloadVisualize
BU of 3urm by Molmil
Crystal structure of the periplasmic sugar binding protein ChvE
分子名称: Multiple sugar-binding periplasmic receptor ChvE, beta-D-galactopyranose
著者Hu, X, Zhao, J, Binns, A, Degrado, W.
登録日2011-11-22
公開日2012-11-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Agrobacterium tumefaciens recognizes its host environment using ChvE to bind diverse plant sugars as virulence signals.
Proc.Natl.Acad.Sci.USA, 110, 2013
3USL
DownloadVisualize
BU of 3usl by Molmil
Crystal Structure of LeuT bound to L-selenomethionine in space group C2 from lipid bicelles
分子名称: ACETATE ION, IODIDE ION, PHOSPHOCHOLINE, ...
著者Wang, H, Elferich, J, Gouaux, E.
登録日2011-11-23
公開日2012-01-11
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Nat.Struct.Mol.Biol., 19, 2012
3USU
DownloadVisualize
BU of 3usu by Molmil
Crystal structure of Butea monosperma seed lectin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Abhilash, J, Geethanandan, K, Bharath, S.R, Sadasivan, C, Haridas, M.
登録日2011-11-24
公開日2012-01-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Crystal structure of Butea monosperma seed lectin
To be Published
3V05
DownloadVisualize
BU of 3v05 by Molmil
2.4 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus.
分子名称: CHLORIDE ION, Superantigen-like Protein
著者Minasov, G, Halavaty, A, Shuvalova, L, Filippova, E.V, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-12-07
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献2.4 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus.
TO BE PUBLISHED
8RH1
DownloadVisualize
BU of 8rh1 by Molmil
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
8S6E
DownloadVisualize
BU of 8s6e by Molmil
Monoclonal antibody MenW targeting serogroup W of Neisseria meningitidis
分子名称: MenW.01 Heavy chain, MenW.01 Light chain, SODIUM ION
著者Pietri, G.P, Bertuzzi, S, Karnicar, K, Unione, L, Lisnic, B, Malic, S, Miklic, K, Novak, M, Calloni, I, Santini, L, Usenik, A, Rosaria Romano, M, Adamo, R, Jonjic, S, Turk, D, Jimenez-Barbero, J, Lenac Rovis, T.
登録日2024-02-27
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Antigenic determinants driving serogroup-specific antibody response to Neisseria meningitidis C, W, and Y capsular polysaccharides: Insights for rational vaccine design.
Carbohydr Polym, 341, 2024
5DGG
DownloadVisualize
BU of 5dgg by Molmil
Central domain of uncharacterized Lpg1148 protein from Legionella pneumophila
分子名称: CHLORIDE ION, Uncharacterized protein
著者Osipiuk, J, Evdokimova, E, Yim, V, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-08-27
公開日2015-09-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol. Syst. Biol., 12, 2016
5DF7
DownloadVisualize
BU of 5df7 by Molmil
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH AZLOCILLIN
分子名称: (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxo-1-{[(2R)-2-{[(2-oxoimidazolidin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}ethyl]-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, Cell division protein, ...
著者Ren, J, Nettleship, J.E, Males, A, Stuart, D.I, Owens, R.J.
登録日2015-08-26
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of penicillin-binding protein 3 in complexes with azlocillin and cefoperazone in both acylated and deacylated forms.
Febs Lett., 590, 2016
8RH2
DownloadVisualize
BU of 8rh2 by Molmil
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT102 Fab heavy chain, HDIT102 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
3UWB
DownloadVisualize
BU of 3uwb by Molmil
Crystal structure of a probable peptide deformylase from strucynechococcus phage S-SSM7 in complex with actinonin
分子名称: 1,2-ETHANEDIOL, ACTINONIN, CHLORIDE ION, ...
著者Lorimer, D, Abendroth, J, Edwards, T.E, Burgin, A, Segall, A, Rohwer, F.
登録日2011-12-01
公開日2013-01-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
3UXW
DownloadVisualize
BU of 3uxw by Molmil
Crystal Structures of an A-T-hook/DNA complex
分子名称: A-T hook peptide, dodecamer DNA
著者Fonfria-Subiros, E, Acosta-Reyes, F.J, Saperas, N, Pous, J, Subirana, J.A, Campos, J.L.
登録日2011-12-05
公開日2012-05-23
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of a complex of DNA with one AT-hook of HMGA1.
Plos One, 7, 2012
5DHQ
DownloadVisualize
BU of 5dhq by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
分子名称: 8-[(2-{[2-(3-bromophenyl)ethyl]amino}-2-oxoethyl)sulfanyl]adenosine, CITRIC ACID, GLYCEROL, ...
著者Gelin, M, Paoletti, J, Assairi, L, Huteau, V, Pochet, S, Labesse, G.
登録日2015-08-31
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献8-Thioalkyl-adenosine derivatives inhibit Listeria monocytogenes NAD kinase through a novel binding mode.
Eur.J.Med.Chem., 124, 2016
8RGZ
DownloadVisualize
BU of 8rgz by Molmil
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.
分子名称: Envelope glycoprotein B, HDIT101 Fab heavy chain, HDIT101 Fab light chain
著者Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
登録日2023-12-14
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
3V16
DownloadVisualize
BU of 3v16 by Molmil
An intramolecular pi-cation latch in phosphatidylinositol-specific phospholipase C from S.aureus controls substrate access to the active site
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase, CHLORIDE ION
著者Goldstein, R.I, Cheng, J, Stec, B, Roberts, M.F.
登録日2011-12-09
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the S. aureus PI-Specific Phospholipase C Reveals Modulation of Active Site Access by a Titratable PI-Cation Latched Loop
Biochemistry, 51, 2012
3V18
DownloadVisualize
BU of 3v18 by Molmil
Structure of the Phosphatidylinositol-specific phospholipase C from Staphylococcus aureus
分子名称: 1-phosphatidylinositol phosphodiesterase, ISOPROPYL ALCOHOL, SULFATE ION
著者Goldstein, R.I, Cheng, J, Stec, B, Roberts, M.F.
登録日2011-12-09
公開日2012-04-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structure of the S. aureus PI-Specific Phospholipase C Reveals Modulation of Active Site Access by a Titratable PI-Cation Latched Loop
Biochemistry, 51, 2012
5DIN
DownloadVisualize
BU of 5din by Molmil
Structural Basis for the Indispensable Role of a Unique Zinc Finger Motif in LNX2 Ubiquitination
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ligand of Numb protein X 2, ZINC ION
著者Sivaraman, J, Nayak, D.
登録日2015-09-01
公開日2015-10-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.864 Å)
主引用文献Structural basis for the indispensable role of a unique zinc finger motif in LNX2 ubiquitination.
Oncotarget, 6, 2015
5DGU
DownloadVisualize
BU of 5dgu by Molmil
Crystal Structure of HIV-1 Protease Inhibitors Containing Substituted fused-Tetrahydropyranyl Tetrahydrofuran as P2-Ligand GRL-004-11A
分子名称: (3R,3aR,4S,7aS)-3-methoxyhexahydro-4H-furo[2,3-b]pyran-4-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
著者Agniswamy, J, Wang, Y.-F, Weber, I.T.
登録日2015-08-28
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Design, synthesis, biological evaluation and X-ray structural studies of HIV-1 protease inhibitors containing substituted fused-tetrahydropyranyl tetrahydrofuran as P2-ligands.
Org.Biomol.Chem., 13, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon