Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 件

3IJT
DownloadVisualize
BU of 3ijt by Molmil
Structural Characterization of SMU.440, a Hypothetical Protein from Streptococcus mutans
分子名称: Putative uncharacterized protein
著者Nan, J, Brostromer, E, Kristensen, O, Su, X.-D.
登録日2009-08-05
公開日2009-08-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.377 Å)
主引用文献Bioinformatics and structural characterization of a hypothetical protein from Streptococcus mutans: implication of antibiotic resistance
Plos One, 4, 2009
3ISV
DownloadVisualize
BU of 3isv by Molmil
Crystal structure of glutamate racemase from Listeria monocytogenes in complex with acetate ion
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Majorek, K.A, Chruszcz, M, Skarina, T, Onopriyenko, O, Stam, J, Anderson, W.F, Savchenko, A, Bujnicki, J.M, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-08-27
公開日2009-09-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of glutamate racemase from Listeria monocytogenes in complex with acetate ion
To be Published
3IU2
DownloadVisualize
BU of 3iu2 by Molmil
Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90096
分子名称: (2R)-2-{4-hydroxy-5-methoxy-2-[3-(4-methylpiperazin-1-yl)propyl]phenyl}-3-pyridin-3-yl-1,3-thiazolidin-4-one, Glycylpeptide N-tetradecanoyltransferase 1, TETRADECANOYL-COA
著者Qiu, W, Hutchinson, A, Wernimont, A, Lin, Y.-H, Kania, A, Ravichandran, M, Kozieradzki, I, Cossar, D, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Wyatt, P.G, Ferguson, M.A.J, Frearson, J.A, Brand, S.Y, Robinson, D.A, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2009-08-29
公開日2009-09-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90096
To be Published
3WJ5
DownloadVisualize
BU of 3wj5 by Molmil
Crystal structure of PPARgamma ligand binding domain in complex with triphenyltin
分子名称: Peroxisome proliferator-activated receptor gamma, triphenylstannanyl
著者Harada, S, Hiromori, Y, Fukakusa, S, Kawahara, K, Nakamura, S, Noda, M, Uchiyama, S, Fukui, K, Nishikawa, J, Nagase, H, Kobayashi, Y, Ohkubo, T, Yoshida, T, Nakanishi, T.
登録日2013-10-04
公開日2014-10-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for PPARgamma transactivation by endocrine disrupting organotin compounds
To be Published
3J1T
DownloadVisualize
BU of 3j1t by Molmil
High affinity dynein microtubule binding domain - tubulin complex
分子名称: Cytoplasmic dynein 1 heavy chain 1, seryl t-RNA synthetase chimera, Tubulin alpha-1B chain, ...
著者Redwine, W.B, Hernandez-Lopez, R, Zou, S, Huang, J, Reck-Peterson, S.L, Leschziner, A.E.
登録日2012-06-25
公開日2012-09-26
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.7 Å)
主引用文献Structural basis for microtubule binding and release by dynein.
Science, 337, 2012
3W3U
DownloadVisualize
BU of 3w3u by Molmil
Crystal structure of Kap121p mutant R349A/Q350A/D353A/E396A/N430K/D438A/N477A
分子名称: Importin subunit beta-3
著者Kobayashi, J, Matsuura, Y.
登録日2012-12-28
公開日2013-04-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for cell-cycle-dependent nuclear import mediated by the karyopherin Kap121p.
J.Mol.Biol., 425, 2013
3WA5
DownloadVisualize
BU of 3wa5 by Molmil
Crystal Structure of type VI peptidoglycan muramidase effector Tse3 in complex with its cognate immunity protein Tsi3
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Tse3-specific immunity protein, ...
著者Ding, J, Wang, T, Liu, W, Wang, D.C.
登録日2013-04-26
公開日2013-10-02
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Complex structure of type VI peptidoglycan muramidase effector and a cognate immunity protein.
Acta Crystallogr.,Sect.D, 69, 2013
3J40
DownloadVisualize
BU of 3j40 by Molmil
Validated Near-Atomic Resolution Structure of Bacteriophage Epsilon15 Derived from Cryo-EM and Modeling
分子名称: gp10, gp7
著者Baker, M.L, Hryc, C.F, Zhang, Q, Wu, W, Jakana, J, Haase-Pettingell, C, Afonine, P.V, Adams, P.D, King, J.A, Jiang, W, Chiu, W.
登録日2013-05-30
公開日2013-07-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.
Proc.Natl.Acad.Sci.USA, 110, 2013
3J7N
DownloadVisualize
BU of 3j7n by Molmil
Virus model of brome mosaic virus (second half data set)
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7L
DownloadVisualize
BU of 3j7l by Molmil
Full virus map of brome mosaic virus
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3WD3
DownloadVisualize
BU of 3wd3 by Molmil
Serratia marcescens Chitinase B complexed with azide inhibitor
分子名称: Chitinase B, GLYCEROL, SULFATE ION, ...
著者Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
登録日2013-06-06
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3J9T
DownloadVisualize
BU of 3j9t by Molmil
Yeast V-ATPase state 1
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Zhao, J, Benlekbir, S, Rubinstein, J.L.
登録日2015-02-23
公開日2015-05-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
1NB4
DownloadVisualize
BU of 1nb4 by Molmil
HC-J4 RNA polymerase apo-form
分子名称: polyprotein
著者Jaeger, J, O'Farrell, D.J, Trowbridge, R, Rowlands, D.J.
登録日2002-12-02
公開日2003-03-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrate complexes of hepatitis C virus RNA polymerase (HC-J4): structural evidence for nucleotide import and de-novo initiation.
J.Mol.Biol., 326, 2003
3J82
DownloadVisualize
BU of 3j82 by Molmil
Electron cryo-microscopy of DNGR-1 in complex with F-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Hanc, P, Fujii, T, Yamada, Y, Huotari, J, Schulz, O, Ahrens, S, Kjaer, S, Way, M, Namba, K, Reis e Sousa, C.
登録日2014-09-25
公開日2015-05-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structure of the Complex of F-Actin and DNGR-1, a C-Type Lectin Receptor Involved in Dendritic Cell Cross-Presentation of Dead Cell-Associated Antigens.
Immunity, 42, 2015
3J8A
DownloadVisualize
BU of 3j8a by Molmil
Structure of the F-actin-tropomyosin complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者von der Ecken, J, Mueller, M, Lehman, W, Manstein, J.M, Penczek, A.P, Raunser, S.
登録日2014-10-08
公開日2014-12-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the F-actin--tropomyosin complex.
Nature, 519, 2015
3J4A
DownloadVisualize
BU of 3j4a by Molmil
Structure of gp8 connector protein
分子名称: Head-to-tail joining protein
著者Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
登録日2013-07-09
公開日2013-08-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
3WAU
DownloadVisualize
BU of 3wau by Molmil
Crystal structure of 4-O-beta-D-mannosyl-D-glucose phosphorylase MGP complexed with M1P
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-O-phosphono-alpha-D-mannopyranose, 4-O-beta-D-mannosyl-D-glucose phosphorylase, ...
著者Nakae, S, Ito, S, Higa, M, Senoura, T, Wasaki, J, Hijikata, A, Shionyu, M, Ito, S, Shirai, T.
登録日2013-05-08
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP
J.Mol.Biol., 425, 2013
3J7B
DownloadVisualize
BU of 3j7b by Molmil
Catalase solved at 3.2 Angstrom resolution by MicroED
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者Nannenga, B.L, Shi, D, Hattne, J, Reyes, F.E, Gonen, T.
登録日2014-06-09
公開日2014-10-08
最終更新日2024-02-21
実験手法ELECTRON CRYSTALLOGRAPHY (3.2 Å)
主引用文献Structure of catalase determined by MicroED.
Elife, 3, 2014
3K6J
DownloadVisualize
BU of 3k6j by Molmil
Crystal structure of the dehydrogenase part of multifuctional enzyme 1 from C.elegans
分子名称: PHOSPHATE ION, Protein F01G10.3, confirmed by transcript evidence, ...
著者Ouyang, Z, Zhang, K, Zhai, Y, Lu, J, Sun, F.
登録日2009-10-09
公開日2010-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the dehydrogenase part of multifuctional enzyme 1 from C.elegans
To be Published
3WIS
DownloadVisualize
BU of 3wis by Molmil
Crystal structure of Burkholderia xenovorans DmrB in complex with FMN: A Cubic Protein Cage for Redox Transfer
分子名称: FLAVIN MONONUCLEOTIDE, Putative dihydromethanopterin reductase (AfpA), SULFATE ION
著者Bobik, T.A, Cascio, D, Jorda, J, McNamara, D.E, Bustos, C, Wang, T.C, Rasche, M.E, Yeates, T.O.
登録日2013-09-25
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structure of dihydromethanopterin reductase, a cubic protein cage for redox transfer
J.Biol.Chem., 289, 2014
3J8H
DownloadVisualize
BU of 3j8h by Molmil
Structure of the rabbit ryanodine receptor RyR1 in complex with FKBP12 at 3.8 Angstrom resolution
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
著者Yan, Z, Bai, X, Yan, C, Wu, J, Scheres, S.H.W, Shi, Y, Yan, N.
登録日2014-10-26
公開日2014-12-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the rabbit ryanodine receptor RyR1 at near-atomic resolution.
Nature, 517, 2015
3K6Z
DownloadVisualize
BU of 3k6z by Molmil
Crystal structure of Rv3671c protease, inactive form
分子名称: POSSIBLE MEMBRANE-ASSOCIATED SERINE PROTEASE
著者Biswas, T, Small, J, Vandal, O, Ehrt, S, Tsodikov, O.V.
登録日2009-10-10
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural insight into serine protease Rv3671c that Protects M. tuberculosis from oxidative and acidic stress.
Structure, 18, 2010
3WH3
DownloadVisualize
BU of 3wh3 by Molmil
human Mincle, ligand free form
分子名称: C-type lectin domain family 4 member E, CALCIUM ION
著者Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K.
登録日2013-08-21
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL
Proc.Natl.Acad.Sci.USA, 110, 2013
1P0F
DownloadVisualize
BU of 1p0f by Molmil
Crystal Structure of the Binary Complex: NADP(H)-Dependent Vertebrate Alcohol Dehydrogenase (ADH8) with the cofactor NADP
分子名称: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent ALCOHOL DEHYDROGENASE, ...
著者Rosell, A, Valencia, E, Pares, X, Fita, I, Farres, J, Ochoa, W.F.
登録日2003-04-10
公開日2003-04-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the vertebrate NADP(H)-dependent alcohol dehydrogenase (ADH8)
J.Mol.Biol., 330, 2003
3WNG
DownloadVisualize
BU of 3wng by Molmil
Cyclic hexapeptide PKIDNp in complex with HIV-1 integrase
分子名称: CADMIUM ION, CHLORIDE ION, Gag-Pol polyprotein, ...
著者Wielens, J, Chalmers, D.K, Parker, M.W.
登録日2013-12-09
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Hexapeptide mimetics of LEDGF in complex with HIV-1 integrase
to be published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon