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PDB: 171 results

6J5B
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Structural basis for the target DNA recognition and binding by the MYB domain of phosphate starvation response regulator 1
Descriptor: DNA (5'-D(*GP*GP*TP*AP*CP*AP*GP*TP*AP*TP*AP*TP*AP*CP*CP*AP*TP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*TP*GP*GP*TP*AP*TP*AP*TP*AP*CP*TP*GP*TP*AP*CP*C)-3'), Protein PHOSPHATE STARVATION RESPONSE 1
Authors:Jiang, M.Q, Sun, L.F, Isupov, M.N, Wu, Y.K.
Deposit date:2019-01-10
Release date:2019-04-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the Target DNA recognition and binding by the MYB domain of phosphate starvation response 1.
Febs J., 286, 2019
7ZCX
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BU of 7zcx by Molmil
S-layer protein SlaA from Sulfolobus acidocaldarius at pH 4.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-deoxy-6-sulfo-beta-D-glucopyranose, ...
Authors:Gambelli, L, Isupov, M.N, Daum, B.
Deposit date:2022-03-29
Release date:2023-06-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
7NZO
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D-lyxose isomerasefrom the hyperthermophilic archaeon Thermofilum sp
Descriptor: 1,2-ETHANEDIOL, D-lyxose/D-mannose family sugar isomerase, MANGANESE (II) ION
Authors:De Rose, S.A, Isupov, M.N, Littlechild, J.A, Schoenheit, P.
Deposit date:2021-03-24
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Biochemical and Structural Characterisation of a Novel D-Lyxose Isomerase From the Hyperthermophilic Archaeon Thermofilum sp.
Front Bioeng Biotechnol, 9, 2021
2V9P
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Crystal structure of papillomavirus E1 hexameric helicase DNA-free form
Descriptor: MAGNESIUM ION, PHOSPHATE ION, REPLICATION PROTEIN E1
Authors:Sanders, C.M, Kovalevskiy, O.V, Sizov, D, Lebedev, A.A, Isupov, M.N, Antson, A.A.
Deposit date:2007-08-24
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Papillomavirus E1 Helicase Assembly Maintains an Asymmetric State in the Absence of DNA and Nucleotide Cofactors.
Nucleic Acids Res., 35, 2007
7NZQ
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D-lyxose isomerase from the hyperthermophilic archaeon Thermofilum sp complexed with D-mannose
Descriptor: 1,2-ETHANEDIOL, D-lyxose/D-mannose family sugar isomerase, DI(HYDROXYETHYL)ETHER, ...
Authors:De Rose, S.A, Isupov, M.N, Littlechild, J.A, Schoenheit, P.
Deposit date:2021-03-24
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Biochemical and Structural Characterisation of a Novel D-Lyxose Isomerase From the Hyperthermophilic Archaeon Thermofilum sp.
Front Bioeng Biotechnol, 9, 2021
7NZP
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D-lyxose isomerase from the hyperthermophilic archaeon Thermofilum sp complexed with D-fructose
Descriptor: 1,2-ETHANEDIOL, D-lyxose/D-mannose family sugar isomerase, MANGANESE (II) ION, ...
Authors:De Rose, S.A, Isupov, M.N, Littlechild, J.A, Schoenheit, P.
Deposit date:2021-03-24
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.345 Å)
Cite:Biochemical and Structural Characterisation of a Novel D-Lyxose Isomerase From the Hyperthermophilic Archaeon Thermofilum sp.
Front Bioeng Biotechnol, 9, 2021
4UTG
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Burkholderia pseudomallei heptokinase WcbL,AMPPNP (ATP analogue) complex.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Vivoli, M, Isupov, M.N, Nicholas, R, Hill, A, Scott, A, Kosma, P, Prior, J, Harmer, N.J.
Deposit date:2014-07-21
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Unraveling the B.Pseudomallei Heptokinase Wcbl: From Structure to Drug Discovery.
Chem.Biol., 22, 2015
3LD0
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Crystal structure of B.licheniformis Anti-TRAP protein, an antagonist of TRAP-RNA interactions
Descriptor: Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA, MAGNESIUM ION, ...
Authors:Shevtsov, M.B, Chen, Y, Isupov, M.N, Gollnick, P, Antson, A.A.
Deposit date:2010-01-12
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacillus licheniformis Anti-TRAP can assemble into two types of dodecameric particles with the same symmetry but inverted orientation of trimers.
J.Struct.Biol., 170, 2010
7C4D
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Marine microorganism esterase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Putative esterase, ...
Authors:Zhu, C.H, Wu, Y.K, Isupov, M.N.
Deposit date:2020-05-16
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural Insights into a Novel Esterase from the East Pacific Rise and Its Improved Thermostability by a Semirational Design.
J.Agric.Food Chem., 69, 2021
5MQZ
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Archaeal branched-chain amino acid aminotransferase from Archaeoglobus fulgidus; holoform
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:James, P, Isupov, M.N, Sayer, C, Littlechild, J.A, Sutter, J.M, Schmidt, M, Schoenheit, P.
Deposit date:2016-12-21
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Thermostable Branched-Chain Amino Acid Transaminases From the Archaea Geoglobus acetivorans and Archaeoglobus fulgidus : Biochemical and Structural Characterization.
Front Bioeng Biotechnol, 7, 2019
8QP0
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A hexamer pore in the S-layer of Sulfolobus acidocaldarius formed by SlaA protein
Descriptor: S-layer protein A
Authors:Gambelli, L, McLaren, M, Isupov, M, Conners, R, Daum, B.
Deposit date:2023-09-29
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (11.2 Å)
Cite:Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
8QOX
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BU of 8qox by Molmil
Two-component assembly of SlaA and SlaB S-layer proteins of Sulfolobus acidocaldarius
Descriptor: Conserved membrane protein, S-layer protein A
Authors:Gambelli, L, McLaren, M, Isupov, M, Conners, R, Daum, B.
Deposit date:2023-09-29
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (11.2 Å)
Cite:Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
4UOV
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BU of 4uov by Molmil
The structure of a tetrameric alpha-carbonic anhydrase from Thermovibrio ammonificans reveals a core formed around intermolecular disulfides, which contribute to its thermostability.
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:James, P, Isupov, M, Sayer, C, Berg, S, Lioliou, M, Kotlar, H, Littlechild, J.
Deposit date:2014-06-10
Release date:2014-10-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Structure of a Tetrameric [Alpha]-Carbonic Anhydrase from Thermovibrio Ammonificans Reveals a Core Formed Around Intermolecular Disulfides that Contribute to its Thermostability
Acta Crystallogr.,Sect.D, 70, 2014
8EDD
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BU of 8edd by Molmil
Staphylococcus aureus endonuclease IV Y33F mutant
Descriptor: CHLORIDE ION, FE (III) ION, PHOSPHATE ION, ...
Authors:Saper, M.A, Kirillov, S, Isupov, M.N, Wiener, R, Rouvinski, A.
Deposit date:2022-09-04
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Octahedrally coordinated iron in the catalytic site of endonuclease IV from Staphylococcus aureus
To Be Published
5I6J
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BU of 5i6j by Molmil
Crystal Structure of SRGAP2 F-BARx
Descriptor: SLIT-ROBO Rho GTPase-activating protein 2
Authors:Sporny, M, Guez-Haddad, J, Isupov, M.N, Opatowsky, Y.
Deposit date:2016-02-16
Release date:2017-03-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural History of Human SRGAP2 Proteins.
Mol. Biol. Evol., 34, 2017
5I7D
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BU of 5i7d by Molmil
Crystal Structure of srGAP2 F-BARx WT Form-2
Descriptor: SLIT-ROBO Rho GTPase-activating protein 2
Authors:Sporny, M, Guez-Haddad, J, Isupov, M.N, Opatowsky, Y.
Deposit date:2016-02-17
Release date:2017-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Structural Basis for srGAP2 Membrane Interactions, and Antagonism by the Human Specific Paralog srGAP2C
To Be Published
5NFQ
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BU of 5nfq by Molmil
Novel epoxide hydrolases belonging to the alpha/beta hydrolases superfamily in metagenomes from hot environments
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IMIDAZOLE, ...
Authors:Ferrandi, E.E, De Rose, S.A, Sayer, C, Guazzelli, E, Marchesi, C, Saneei, V, Isupov, M.N, Littlechild, J.A, Monti, D.
Deposit date:2017-03-15
Release date:2018-05-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:New Thermophilic alpha / beta Class Epoxide Hydrolases Found in Metagenomes From Hot Environments.
Front Bioeng Biotechnol, 6, 2018
6KXK
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BON1
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, Q.C, Jiang, M.Q, Isupov, M.N, Sun, L.F, Wu, Y.K.
Deposit date:2019-09-12
Release date:2020-09-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of an Arabidopsis Copine providing insights into this protein family
To be published
3HGJ
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BU of 3hgj by Molmil
Old Yellow Enzyme from Thermus scotoductus SA-01 complexed with p-hydroxy-benzaldehyde
Descriptor: Chromate reductase, FLAVIN MONONUCLEOTIDE, P-HYDROXYBENZALDEHYDE
Authors:Opperman, D.J, Sewell, B.T, Litthauer, D, Isupov, M.N, Littlechild, J.A, van Heerden, E.
Deposit date:2009-05-14
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a thermostable old yellow enzyme from Thermus scotoductus SA-01
Biochem.Biophys.Res.Commun., 393, 2010
1H2B
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BU of 1h2b by Molmil
Crystal Structure of the Alcohol Dehydrogenase from the Hyperthermophilic Archaeon Aeropyrum pernix at 1.65A Resolution
Descriptor: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), OCTANOIC ACID (CAPRYLIC ACID), ...
Authors:Guy, J.E, Isupov, M.N, Littlechild, J.A.
Deposit date:2002-08-02
Release date:2003-08-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The structure of an alcohol dehydrogenase from the hyperthermophilic archaeon Aeropyrum pernix.
J.Mol.Biol., 331, 2003
5I6R
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BU of 5i6r by Molmil
Crystal Structure of srGAP2 F-BARx WT Form-1
Descriptor: ACETATE ION, D-MALATE, SLIT-ROBO Rho GTPase-activating protein 2, ...
Authors:Sporny, M, Guez-Haddad, J, Isupov, M.N, Opatowsky, Y.
Deposit date:2016-02-16
Release date:2017-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis for srGAP2 Membrane Interactions, and Antagonism by the Human Specific Paralog srGAP2C
To Be Published
6KXU
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BON1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Wang, Q.C, Jiang, M.Q, Isupov, M.N, Sun, L.F, Wu, Y.K.
Deposit date:2019-09-12
Release date:2020-09-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal Structure of an Arabidopsis Copine providing insights into this protein family
To be published
3HF3
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BU of 3hf3 by Molmil
Old Yellow Enzyme from Thermus scotoductus SA-01
Descriptor: Chromate reductase, FLAVIN MONONUCLEOTIDE, SULFATE ION
Authors:Opperman, D.J, Sewell, B.T, Litthauer, D, Isupov, M.N, Littlechild, J.A, van Heerden, E.
Deposit date:2009-05-11
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a thermostable old yellow enzyme from Thermus scotoductus SA-01
Biochem.Biophys.Res.Commun., 393, 2010
3SS7
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BU of 3ss7 by Molmil
Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.55 A resolution
Descriptor: D-serine dehydratase, GLYCEROL, POTASSIUM ION, ...
Authors:Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
Deposit date:2011-07-07
Release date:2012-01-18
Last modified:2012-02-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011
3SS9
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Crystal structure of holo D-serine dehydratase from Escherichia coli at 1.97 A resolution
Descriptor: D-serine dehydratase, POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Urusova, D.V, Isupov, M.N, Antonyuk, S.V, Kachalova, G.S, Vagin, A.A, Lebedev, A.A, Bourenkov, G.P, Dauter, Z, Bartunik, H.D, Melik-Adamyan, W.R, Mueller, T.D, Schnackerz, K.D.
Deposit date:2011-07-08
Release date:2012-01-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of D-serine dehydratase from Escherichia coli.
Biochim.Biophys.Acta, 1824, 2011

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