5Y95
| Haddock model of mSIN3B PAH1 domain | Descriptor: | Paired amphipathic helix protein Sin3b, propan-2-yl (3R,6S,9aS)-3-ethyl-8-(3-methylbutyl)-6-(2-methylsulfanylethyl)-4,7-bis(oxidanylidene)-9,9a-dihydro-6H-pyrazino[2,1-c][1,2,4]oxadiazine-1-carboxylate | Authors: | Kurita, J, Hirao, Y, Nishimura, Y. | Deposit date: | 2017-08-22 | Release date: | 2017-10-04 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | A mimetic of the mSin3-binding helix of NRSF/REST ameliorates abnormal pain behavior in chronic pain models. Bioorg. Med. Chem. Lett., 27, 2017
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5XV8
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8I53
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3APM
| Crystal structure of the human SNP PAD4 protein | Descriptor: | Protein-arginine deiminase type-4 | Authors: | Horikoshi, N, Tachiwana, H, Saito, K, Osakabe, A, Sato, M, Yamada, M, Akashi, S, Nishimura, Y, Kagawa, W, Kurumizaka, H. | Deposit date: | 2010-10-19 | Release date: | 2011-01-26 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural and biochemical analyses of the human PAD4 variant encoded by a functional haplotype gene Acta Crystallogr.,Sect.D, 67, 2011
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6K5W
| Solution structure of the chromodomain of yeast Eaf3 | Descriptor: | Chromatin modification-related protein EAF3 | Authors: | Okuda, M, Nishimura, Y. | Deposit date: | 2019-05-31 | Release date: | 2020-02-26 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The Eaf3 chromodomain acts as a pH sensor for gene expression by altering its binding affinity for histone methylated-lysine residues. Biosci.Rep., 40, 2020
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3APN
| Crystal structure of the human wild-type PAD4 protein | Descriptor: | Protein-arginine deiminase type-4 | Authors: | Horikoshi, N, Tachiwana, H, Saito, K, Osakabe, A, Sato, M, Yamada, M, Akashi, S, Nishimura, Y, Kagawa, W, Kurumizaka, H. | Deposit date: | 2010-10-19 | Release date: | 2011-01-26 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural and biochemical analyses of the human PAD4 variant encoded by a functional haplotype gene Acta Crystallogr.,Sect.D, 67, 2011
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2Z33
| Solution structure of the DNA complex of PhoB DNA-binding/transactivation Domain | Descriptor: | 5'-D(*AP*CP*AP*GP*AP*TP*TP*TP*AP*TP*GP*AP*CP*AP*GP*T)-3', 5'-D(*AP*CP*TP*GP*TP*CP*AP*TP*AP*AP*AP*TP*CP*TP*GP*T)-3', Phosphate regulon transcriptional regulatory protein phoB | Authors: | Yamane, T, Okamura, H, Ikeguchi, M, Nishimura, Y, Kidera, A. | Deposit date: | 2007-05-31 | Release date: | 2008-04-22 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment. Proteins, 71, 2008
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