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5Y95

Haddock model of mSIN3B PAH1 domain

Summary for 5Y95
Entry DOI10.2210/pdb5y95/pdb
Related2CR7
NMR InformationBMRB: 27227
DescriptorPaired amphipathic helix protein Sin3b, propan-2-yl (3R,6S,9aS)-3-ethyl-8-(3-methylbutyl)-6-(2-methylsulfanylethyl)-4,7-bis(oxidanylidene)-9,9a-dihydro-6H-pyrazino[2,1-c][1,2,4]oxadiazine-1-carboxylate (2 entities in total)
Functional Keywordshaddock model, complex, gene regulation
Biological sourceMus musculus (Mouse)
Cellular locationNucleus : Q62141
Total number of polymer chains1
Total formula weight9079.18
Authors
Kurita, J.,Hirao, Y.,Nishimura, Y. (deposition date: 2017-08-22, release date: 2017-10-04, Last modification date: 2025-03-12)
Primary citationUeda, H.,Kurita, J.I.,Neyama, H.,Hirao, Y.,Kouji, H.,Mishina, T.,Kasai, M.,Nakano, H.,Yoshimori, A.,Nishimura, Y.
A mimetic of the mSin3-binding helix of NRSF/REST ameliorates abnormal pain behavior in chronic pain models.
Bioorg. Med. Chem. Lett., 27:4705-4709, 2017
Cited by
PubMed Abstract: The neuron-restrictive silencing factor NRSF/REST binds to neuron-restrictive silencing elements in neuronal genes and recruits corepressors such as mSin3 to inhibit epigenetically neuronal gene expression. Because dysregulation of NRSF/REST is related to neuropathic pain, here, we have designed compounds to target neuropathic pain based on the mSin3-binding helix structure of NRSF/REST and examined their ability to bind to mSin3 by NMR. One compound, mS-11, binds strongly to mSin3 with a binding mode similar to that of NRSF/REST. In a mouse model of neuropathic pain, mS-11 was found to ameliorate abnormal pain behavior and to reverse lost peripheral morphine analgesia. Furthermore, even in the less well epigenetically defined case of fibromyalgia, mS-11 ameliorated symptoms in a mouse model, suggesting that fibromyalgia is related to the dysfunction of NRSF/REST. Taken together, these findings show that the chemically optimized mimetic mS-11 can inhibit mSin3-NRSF/REST binding and successfully reverse lost peripheral and central morphine analgesia in mouse models of pain.
PubMed: 28927787
DOI: 10.1016/j.bmcl.2017.09.006
PDB entries with the same primary citation
Experimental method
SOLUTION NMR
Structure validation

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