Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 26 results

4Z9I
DownloadVisualize
BU of 4z9i by Molmil
Asp-TarS from E. coli
Descriptor: ASPARTIC ACID, Methyl-accepting chemotaxis protein II
Authors:Mise, T.
Deposit date:2015-04-10
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural Analysis of the Ligand-Binding Domain of the Aspartate Receptor Tar from Escherichia coli
Biochemistry, 55, 2016
4Z9H
DownloadVisualize
BU of 4z9h by Molmil
Asp-Tar from E. coli
Descriptor: ASPARTIC ACID, Methyl-accepting chemotaxis protein II
Authors:Mise, T.
Deposit date:2015-04-10
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:Structural Analysis of the Ligand-Binding Domain of the Aspartate Receptor Tar from Escherichia coli
Biochemistry, 55, 2016
4Z9J
DownloadVisualize
BU of 4z9j by Molmil
Apo-Tar from E. coli
Descriptor: Methyl-accepting chemotaxis protein II
Authors:Mise, T.
Deposit date:2015-04-10
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Analysis of the Ligand-Binding Domain of the Aspartate Receptor Tar from Escherichia coli
Biochemistry, 55, 2016
3HRX
DownloadVisualize
BU of 3hrx by Molmil
Crystal structure of phenylacetic acid degradation protein PaaG
Descriptor: Probable enoyl-CoA hydratase
Authors:Kichise, T, Hisano, T, Takeda, K, Miki, K.
Deposit date:2009-06-10
Release date:2009-06-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of phenylacetic acid degradation protein PaaG from Thermus thermophilus HB8
Proteins, 76, 2009
2K1Q
DownloadVisualize
BU of 2k1q by Molmil
NMR structure of hepatitis c virus ns3 serine protease complexed with the non-covalently bound phenethylamide inhibitor
Descriptor: NS3 PROTEASE, PHENETHYLAMIDE, ZINC ION
Authors:Eliseo, T, Gallo, M, Pennestri, M, Bazzo, R, Cicero, D.O.
Deposit date:2008-03-13
Release date:2009-02-03
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Binding of a noncovalent inhibitor exploiting the S' region stabilizes the hepatitis C virus NS3 protease conformation in the absence of cofactor.
J.Mol.Biol., 385, 2009
2JN3
DownloadVisualize
BU of 2jn3 by Molmil
NMR structure of cl-BABP complexed to chenodeoxycholic acid
Descriptor: CHENODEOXYCHOLIC ACID, Fatty acid-binding protein, liver
Authors:Eliseo, T, Ragona, L, Catalano, M, Assfalf, M, Paci, M, Zetta, L, Molinari, H, Cicero, D.O.
Deposit date:2006-12-22
Release date:2007-07-03
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structural and dynamic determinants of ligand binding in the ternary complex of chicken liver bile acid binding protein with two bile salts revealed by NMR
Biochemistry, 46, 2007
5JHQ
DownloadVisualize
BU of 5jhq by Molmil
ARCs 1-3 of human Tankyrase-1 bound to a peptide derived from IRAP
Descriptor: Peptide derived from insulin-responsive aminopeptidase (IRAP), Tankyrase-1
Authors:Eisemann, T, Pascal, J.M.
Deposit date:2016-04-21
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Tankyrase-1 Ankyrin Repeats Form an Adaptable Binding Platform for Targets of ADP-Ribose Modification.
Structure, 24, 2016
1NXN
DownloadVisualize
BU of 1nxn by Molmil
SOLUTION STRUCTURE OF CONTRYPHAN-VN
Descriptor: CONTRYPHAN-VN, MAJOR FORM (CIS CONFORMER)
Authors:Eliseo, T, Cicero, D.O, Polticelli, F, Schinina, M.E, Massilia, G.R, Paci, M, Ascenzi, P.
Deposit date:2003-02-11
Release date:2003-03-04
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Solution structure of the cyclic peptide contryphan-Vn, a Ca2+-dependent K+ channel modulator
Biopolymers, 74, 2004
1ZH1
DownloadVisualize
BU of 1zh1 by Molmil
Structure of the zinc-binding domain of HCV NS5A
Descriptor: ZINC ION, non-structural polyprotein
Authors:Tellinghuisen, T.L, Marcotrigiano, J, Rice, C.M.
Deposit date:2005-04-22
Release date:2005-05-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the zinc-binding domain of an essential component of the hepatitis C virus replicase.
Nature, 435, 2005
1ZZF
DownloadVisualize
BU of 1zzf by Molmil
The DNA-bound solution structure of HPV-16 E2 DNA-binding domain
Descriptor: Regulatory protein E2
Authors:Eliseo, T, Nadra, A.D, De Prat-Gay, G, Paci, M, Cicero, O.D.
Deposit date:2005-06-14
Release date:2006-03-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The DNA-bound solution structure of HPV-16 E2 DNA-binding domain
to be published
8HLB
DownloadVisualize
BU of 8hlb by Molmil
Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2
Descriptor: TR109 heavy chain, TR109 light chain, TR92 heavy chain, ...
Authors:Akiba, H, Fujita, J, Ise, T, Nishiyama, K, Miyata, T, Kato, T, Namba, K, Ohno, H, Kamada, H, Nagata, S, Tsumoto, K.
Deposit date:2022-11-29
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Development of a 1:1-binding biparatopic anti-TNFR2 antagonist by reducing signaling activity through epitope selection.
Commun Biol, 6, 2023
6YQN
DownloadVisualize
BU of 6yqn by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW9
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ~{N}-(2-aminophenyl)-4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]t rideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]benzamide
Authors:Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-04-17
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
6YQP
DownloadVisualize
BU of 6yqp by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW22
Descriptor: (~{E})-3-[4-[[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6 ),4,7,10,12-pentaen-9-yl]ethanoylamino]methyl]phenyl]-~{N}-oxidanyl-prop-2-enamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-04-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
6YQO
DownloadVisualize
BU of 6yqo by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with the dual inhibitor TW12
Descriptor: (S)-N1-(4-(2-(4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetamido)phenyl)-N8-hydroxyoctanediamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Joerger, A.C, Balourdas, D.I, Weiser, T, Chatterjee, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-04-17
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Characterization of a dual BET/HDAC inhibitor for treatment of pancreatic ductal adenocarcinoma.
Int.J.Cancer, 147, 2020
1YO8
DownloadVisualize
BU of 1yo8 by Molmil
Structure of the C-terminal domain of human thrombospondin-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Carlson, C.B, Bernstein, D.A, Annis, D.S, Misenheimer, T.M, Hannah, B.A, Mosher, D.F, Keck, J.L.
Deposit date:2005-01-26
Release date:2005-09-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the calcium-rich signature domain of human thrombospondin-2
Nat.Struct.Mol.Biol., 12, 2005
2K6L
DownloadVisualize
BU of 2k6l by Molmil
The solution structure of XACb0070 from Xanthonomas axonopodis pv citri reveals this new protein is a member of the RHH family of transcriptional repressors
Descriptor: Putative uncharacterized protein
Authors:Gallo, M, Cicero, D.O, Amata, I, Eliseo, T, Paci, M, Spisni, A, Ferrari, E, Pertinhez, T.A, Farah, C.S.
Deposit date:2008-07-11
Release date:2009-06-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure reveals that XACb0070 from the plant pathogen Xanthomonas citri belongs to the RHH superfamily of bacterial DNA-binding proteins
To be Published
2MNQ
DownloadVisualize
BU of 2mnq by Molmil
1H, 13C, and 15N Chemical Shift Assignments for Thymosin alpha 1
Descriptor: THYMOSIN ALPHA-1
Authors:Nepravishta, R, Mandaliti, W, Eliseo, T, Sinibaldi Vallebona, P, Pica, F, Garaci, E, Paci, M.
Deposit date:2014-04-09
Release date:2015-03-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Thymosin alpha 1 inserts N terminus into model membranes assuming a helical conformation.
Expert Opin Biol Ther, 15 Suppl 1, 2015
2OII
DownloadVisualize
BU of 2oii by Molmil
Structure of EMILIN-1 C1q-like domain
Descriptor: EMILIN-1
Authors:Verdone, G, Colebrooke, S.A, Corazza, A, Cicero, D.O, Eliseo, T, Viglino, P, Campbell, I.D, Colombatti, A, Esposito, G.
Deposit date:2007-01-11
Release date:2008-01-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of the C-terminal domain of EMILIN-1
To be Published
2M2B
DownloadVisualize
BU of 2m2b by Molmil
NMR structure of the RRM2 domain of the protein RBM10 from Homo sapiens
Descriptor: RNA-binding protein 10
Authors:Serrano, P, Geralt, M, Dutta, S.K, Wuthrich, K, Wrobel, R.L, Makino, S, Misenhiemer, T.M, Markley, J.L, Fox, B.G, Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL), Mitochondrial Protein Partnership (MPP)
Deposit date:2012-12-17
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the RRM2 domain of the protein RBM10 from Homo sapiens
To be Published
2KA3
DownloadVisualize
BU of 2ka3 by Molmil
Structure of EMILIN-1 C1Q-like domain
Descriptor: EMILIN-1
Authors:Verdone, G, Corazza, A, Colebrooke, S.A, Cicero, D.O, Eliseo, T, Boyd, J, Doliana, R, Fogolari, F, Viglino, P, Colombatti, A, Campbell, I.D, Esposito, G.
Deposit date:2008-10-30
Release date:2008-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR-based homology model for the solution structure of the C-terminal globular domain of EMILIN1
J.Biomol.Nmr, 43, 2009
6XM1
DownloadVisualize
BU of 6xm1 by Molmil
SM Protein Vps45 in Complex with Qa SNARE Tlg2
Descriptor: Tlg2 Qa SNARE, Vps45
Authors:Jeffrey, P.D, Eisemann, T.J, Hughson, F.M.
Deposit date:2020-06-29
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Sec1/Munc18 protein Vps45 holds the Qa-SNARE Tlg2 in an open conformation.
Elife, 9, 2020
6XMD
DownloadVisualize
BU of 6xmd by Molmil
SM Protein Vps45 in Complex with Qa SNARE Tlg2 (1-310)
Descriptor: Tlg2 Qa SNARE, Vps45
Authors:Jeffrey, P.D, Eisemann, T.J, Hughson, F.M.
Deposit date:2020-06-30
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:The Sec1/Munc18 protein Vps45 holds the Qa-SNARE Tlg2 in an open conformation.
Elife, 9, 2020
6FE6
DownloadVisualize
BU of 6fe6 by Molmil
Solution structure of a last generation P2-P4 macrocyclic inhibitor
Descriptor: (3aR,7S,10S,12R,24aR)-7-cyclopentyl-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-5,8-dioxo-1,2,3,3a,5,6,7,8,11,12,20,21,22,23,24,24a-hexadecahydro-10H-9,12-methanocyclopenta[18,19][1,10,3,6]dioxadiazacyclononadecino[12,11-b]quinoline-10-carboxamide, Non-structural 3 protease, ZINC ION
Authors:Gallo, M, Eliseo, T, Cicero, D.O.
Deposit date:2017-12-29
Release date:2019-01-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a last generation macrocyclic inhibitor. Hepatitis C virus NS3 protease complex: when S prime region occupancy is not enough to stabilize the protein conformation in the absence of NS4A.
To Be Published
1BY1
DownloadVisualize
BU of 1by1 by Molmil
DBL homology domain from beta-PIX
Descriptor: PROTEIN (PIX)
Authors:Aghazadeh, B, Zhu, K, Kubiseski, T.J, Liu, G.A, Pawson, T, Zheng, Y, Rosen, M.K.
Deposit date:1998-10-22
Release date:1999-10-24
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and Mutagenesis of the Dbl Homology Domain
Nat.Struct.Biol., 5, 1998
1R8P
DownloadVisualize
BU of 1r8p by Molmil
HPV-16 E2C solution structure
Descriptor: Regulatory protein E2
Authors:Nadra, A.D, Eliseo, T, Cicero, D.O.
Deposit date:2003-10-28
Release date:2004-11-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the HPV-16 E2 DNA binding domain, a transcriptional regulator with a dimeric beta-barrel fold
J.Biomol.NMR, 30, 2004

 

12>

223166

數據於2024-07-31公開中

PDB statisticsPDBj update infoContact PDBjnumon