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PDB: 232 件
3AXK
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Structure of rice Rubisco in complex with NADP(H)
分子名称: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
登録日2011-04-11
公開日2012-04-11
最終更新日2013-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
2Z5G
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Crystal structure of T1 lipase F16L mutant
分子名称: CALCIUM ION, CHLORIDE ION, Thermostable lipase, ...
著者Matsumura, H, Yamamoto, T, Inoue, T, Kai, Y.
登録日2007-07-08
公開日2007-10-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase
Proteins, 70, 2007
3A2W
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Peroxiredoxin (C50S) from Aeropytum pernix K1 (peroxide-bound form)
分子名称: GLYCEROL, PEROXIDE ION, Probable peroxiredoxin
著者Nakamura, T, Kado, Y, Yamaguchi, F, Matsumura, H, Ishikawa, K, Inoue, T.
登録日2009-06-04
公開日2009-10-27
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3A2V
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Peroxiredoxin (C207S) from Aeropyrum pernix K1 complexed with hydrogen peroxide
分子名称: PEROXIDE ION, Probable peroxiredoxin
著者Nakamura, T, Kado, Y, Yamaguchi, F, Ishikawa, K, Matsumura, H, Inoue, T.
登録日2009-06-04
公開日2009-10-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3A2X
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Peroxiredoxin (C50S) from Aeropyrum pernix K1 (acetate-bound form)
分子名称: ACETATE ION, Probable peroxiredoxin
著者Nakamura, T, Kado, Y, Yamaguchi, F, Matsumura, H, Ishikawa, K, Inoue, T.
登録日2009-06-04
公開日2009-10-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3B1K
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BU of 3b1k by Molmil
Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the absence of copper from Synechococcus elongatus
分子名称: CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Matsumura, H, Kai, A, Inoue, T.
登録日2011-07-04
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.302 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B1J
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Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus
分子名称: COPPER (II) ION, CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), ...
著者Matsumura, H, Kai, A, Inoue, T.
登録日2011-07-04
公開日2012-01-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B20
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Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with NADfrom Synechococcus elongatus"
分子名称: Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Matsumura, H, Kai, A, Maeda, T, Inoue, T.
登録日2011-07-17
公開日2012-01-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
2ZA1
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Crystal Structure of orotidine 5'-monophosphate decarboxylase complexed with orotidine 5'-monophosphate from P.falciparum
分子名称: OROTIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Tokuoka, K, Inoue, T.
登録日2007-09-26
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase
J.BIOCHEM.(TOKYO), 143, 2008
2ZA3
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Crystal Structure of orotidine 5'-monophosphate decarboxylase complexed with uridine 5'-monophosphate from P.falciparum
分子名称: Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
著者Tokuoka, K, Inoue, T.
登録日2007-09-26
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase
J.Biochem.(Tokyo), 143, 2008
2ZA2
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Crystal Structure of the apo-form of orotidine-5'-monophosphate decarboxylase from P.falciparum
分子名称: Orotidine 5'-phosphate decarboxylase
著者Tokuoka, K, Inoue, T.
登録日2007-09-26
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase
J.Biochem.(Tokyo), 143, 2008
3AGV
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BU of 3agv by Molmil
Crystal structure of a human IgG-aptamer complex
分子名称: 5'-R(*GP*GP*AP*GP*GP*(UFT)P*GP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*GP*AP*AP*A*GP*GP*AP*AP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*A)-3', CALCIUM ION, Ig gamma-1 chain C region, ...
著者Nomura, Y, Sugiyama, S, Sakamoto, T, Miyakawa, S, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Nakamura, Y, Matsumura, H.
登録日2010-04-08
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex
Nucleic Acids Res., 38, 2010
3AGT
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Hemerythrin-like domain of DcrH (met)
分子名称: CHLORO DIIRON-OXO MOIETY, Hemerythrin-like domain protein DcrH
著者Onoda, A, Okamoto, Y, Sugimoto, H, Mizohata, E, Inoue, T, Shiro, Y, Hayashi, T.
登録日2010-04-06
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Characteristics of Diiron Site with Large Cavity in Hemerythrin-like Domain of DcrH
to be published
3AGU
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Hemerythrin-like domain of DcrH (semimet-R)
分子名称: CHLORO DIIRON-OXO MOIETY, Hemerythrin-like domain protein DcrH
著者Onoda, A, Okamoto, Y, Sugimoto, H, Mizohata, E, Inoue, T, Shiro, Y, Hayashi, T.
登録日2010-04-06
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Characteristics of Diiron Site with Large Cavity in Hemerythrin-like Domain of DcrH
to be published
3VUH
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BU of 3vuh by Molmil
Crystal structure of a cysteine-deficient mutant M3 in MAP kinase JNK1
分子名称: GLYCEROL, Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1, ...
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-06-28
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
3VUL
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BU of 3vul by Molmil
Crystal structure of a cysteine-deficient mutant M1 in MAP kinase JNK1
分子名称: Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-07-02
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
3VUK
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BU of 3vuk by Molmil
Crystal structure of a cysteine-deficient mutant M5 in MAP kinase JNK1
分子名称: Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1, SULFATE ION
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-07-02
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
3VUI
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Crystal structure of a cysteine-deficient mutant M2 in MAP kinase JNK1
分子名称: Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1, SULFATE ION
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-06-28
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
2ZVI
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Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
著者Tamura, H, Yadani, T, Kai, Y, Inoue, T, Matsumura, H.
登録日2008-11-07
公開日2009-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the apo decarbamylated form of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Acta Crystallogr.,Sect.D, 65, 2009
3WE7
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BU of 3we7 by Molmil
Crystal Structure of Diacetylchitobiose Deacetylase from Pyrococcus horikoshii
分子名称: ACETIC ACID, GLYCEROL, HEXANE-1,6-DIOL, ...
著者Mine, S, Nakamura, T, Fukuda, Y, Inoue, T, Uegaki, K, Sato, T.
登録日2013-07-01
公開日2014-05-07
最終更新日2014-08-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Expression from engineered Escherichia coli chromosome and crystallographic study of archaeal N,N'-diacetylchitobiose deacetylase
Febs J., 281, 2014
3VUG
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Crystal structure of a cysteine-deficient mutant M2 in MAP kinase JNK1
分子名称: Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1, SULFATE ION
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-06-28
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
3VUD
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BU of 3vud by Molmil
Crystal structure of a cysteine-deficient mutant M1 in MAP kinase JNK1
分子名称: Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1, SULFATE ION
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-06-28
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
3VUM
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Crystal structure of a cysteine-deficient mutant M7 in MAP kinase JNK1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Mitogen-activated protein kinase 8, Peptide from C-Jun-amino-terminal kinase-interacting protein 1, ...
著者Nakaniwa, T, Kinoshita, T, Inoue, T.
登録日2012-07-02
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Seven cysteine-deficient mutants depict the interplay between thermal and chemical stabilities of individual cysteine residues in mitogen-activated protein kinase c-Jun N-terminal kinase 1
Biochemistry, 51, 2012
3WIH
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Crystal structure of the third fibronectin domain (Fn3) of human ROBO1 in complex with the Fab fragment of murine monoclonal antibody B2212A.
分子名称: GLYCEROL, Roundabout homolog 1, anti-human ROBO1 antibody B2212A Fab heavy chain, ...
著者Nakayama, T, Mizohata, E, Yamashita, T, Nagatoishi, M, Iwanari, H, Mochizuki, Y, Kado, Y, Yokota, Y, Sato, R, Tsumoto, K, Fujitani, H, Kodama, T, Hamakubo, T, Inoue, T.
登録日2013-09-12
公開日2015-01-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Structural features of interfacial tyrosine residue in ROBO1 fibronectin domain-antibody complex: Crystallographic, thermodynamic, and molecular dynamic analyses
Protein Sci., 24, 2015
3WII
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Crystal structure of the Fab fragment of B2212A, a murine monoclonal antibody specific for the third fibronectin domain (Fn3) of human ROBO1.
分子名称: anti-human ROBO1 antibody B2212A Fab heavy chain, anti-human ROBO1 antibody B2212A Fab light chain
著者Nakayama, T, Mizohata, E, Yamashita, T, Nagatoishi, S, Nakakido, M, Iwanari, H, Mochizuki, Y, Kado, Y, Yokota, Y, Sato, R, Tsumoto, K, Fujitani, H, Kodama, T, Hamakubo, T, Inoue, T.
登録日2013-09-12
公開日2015-01-21
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural features of interfacial tyrosine residue in ROBO1 fibronectin domain-antibody complex: Crystallographic, thermodynamic, and molecular dynamic analyses
Protein Sci., 24, 2015

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