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PDB: 9696 results

4V0H
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BU of 4v0h by Molmil
Human metallo beta lactamase domain containing protein 1 (hMBLAC1)
Descriptor: FE (III) ION, GLYCEROL, METALLO-BETA-LACTAMASE DOMAIN-CONTAINING PROTEIN 1 1
Authors:Pettinati, I, McDonough, M.A, Brem, J, Schofield, C.J.
Deposit date:2014-09-16
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Biosynthesis of histone messenger RNA employs a specific 3' end endonuclease.
Elife, 7, 2018
4UV0
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BU of 4uv0 by Molmil
Structure of a semisynthetic phosphorylated DAPK
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, TRIETHYLENE GLYCOL
Authors:de Diego, I, Rios, P, Meyer, C, Koehn, M, Wilmanns, M.
Deposit date:2014-08-01
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Molecular Mechanisms Behind Dapk Regulation: How the Phosphorylation Activity Switch Works
To be Published
2W5U
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BU of 2w5u by Molmil
Flavodoxin from Helicobacter pylori in complex with the C3 inhibitor
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin, [2-(5-amino-4-cyano-1H-pyrazol-1-yl)-5-(trifluoromethyl)phenyl](hydroxy)oxoammonium
Authors:Cremades, N, Perez-Dorado, I, Hermoso, J.A, Martinez-Julvez, M, Sancho, J.
Deposit date:2008-12-12
Release date:2009-12-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Discovery of Specific Flavodoxin Inhibitors as Potential Therapeutic Agents Against Helicobacter Pylori Infection.
Acs Chem.Biol., 4, 2009
5LOF
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BU of 5lof by Molmil
Crystal structure of the MBP-MCL1 complex with highly selective and potent inhibitor of MCL1
Descriptor: (2~{R})-2-[5-[3-chloranyl-2-methyl-4-[2-(4-methylpiperazin-1-yl)ethoxy]phenyl]-6-(5-fluoranylfuran-2-yl)thieno[2,3-d]pyrimidin-4-yl]oxy-3-[2-[[2-[2,2,2-tris(fluoranyl)ethyl]pyrazol-3-yl]methoxy]phenyl]propanoic acid, Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Dokurno, P, Kotschy, A, Szlavik, Z, Murray, J, Davidson, J, Csekei, M, Paczal, A, Szabo, Z, Sipos, S, Radics, G, Proszenyak, A, Balint, B, Ondi, L, Blasko, G, Robertson, A, Surgenor, A, Chen, I, Matassova, N, Smith, J, Pedder, C, Graham, C, Geneste, O.
Deposit date:2016-08-09
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The MCL1 inhibitor S63845 is tolerable and effective in diverse cancer models.
Nature, 538, 2016
5LEO
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BU of 5leo by Molmil
Complex structure of lysostaphin SH3b domain with peptidoglycan fragment
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLY-GLY-GLY-GLY-GLY, Lysostaphin, ...
Authors:Jagielska, E, Nowak, E, Bochtler, M, Sabala, I.
Deposit date:2016-06-30
Release date:2017-07-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Complex structure of lysostaphin SH3doamin with peptidoglycan fragment
To Be Published
5LT5
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BU of 5lt5 by Molmil
Carboxysome shell protein CcmP from Synechococcus elongatus PCC 7942
Descriptor: CHLORIDE ION, CcmP, GLYCEROL
Authors:Larsson, A.M, Hasse, D, Valegard, K, Andersson, I.
Deposit date:2016-09-06
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structures of beta-carboxysome shell protein CcmP: ligand binding correlates with the closed or open central pore.
J. Exp. Bot., 68, 2017
5LW6
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BU of 5lw6 by Molmil
Crystal structure of a Se-Met substituted Dictyostelium discoideum ADP-ribose binding macrodomain (residues 342-563) of DDB_G0293866
Descriptor: DDB_G0293866
Authors:Leys, D, Barkauskaite, E, Pinero, B.B, Ahel, I.
Deposit date:2016-09-15
Release date:2016-09-28
Last modified:2016-10-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of ADP-ribosylation in regulating DNA interstrand crosslink repair.
J.Cell.Sci., 129, 2016
5LX9
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BU of 5lx9 by Molmil
CRYSTAL STRUCTURE OF HUMAN ADIPONECTIN RECEPTOR 2 IN COMPLEX WITH A C18 FREE FATTY ACID AT 2.4 ANGSTROM RESOLUTION
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, HUMAN ADIPONECTIN RECEPTOR 2, OLEIC ACID, ...
Authors:Vasiliauskaite-Brooks, I, Leyrat, C, Hoh, F, Granier, S.
Deposit date:2016-09-20
Release date:2017-03-22
Last modified:2017-04-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into adiponectin receptors suggest ceramidase activity.
Nature, 6, 2017
5LCY
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BU of 5lcy by Molmil
Formaldehyde-Responsive Regulator FrmR E64H variant from Salmonella enterica serovar Typhimurium
Descriptor: Frmr
Authors:Pohl, E, Robinson, N, Osman, D, Piergentili, C, Uson, I.
Deposit date:2016-06-22
Release date:2016-08-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The Effectors and Sensory Sites of Formaldehyde-responsive Regulator FrmR and Metal-sensing Variant.
J.Biol.Chem., 291, 2016
5LJB
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BU of 5ljb by Molmil
Crystal structure of holo human CRBP1
Descriptor: RETINOL, Retinol-binding protein 1
Authors:zanotti, G, Valese, F, Berni, R, menozzi, I.
Deposit date:2016-07-18
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.263 Å)
Cite:Structural and molecular determinants affecting the interaction of retinol with human CRBP1.
J. Struct. Biol., 197, 2017
5LJG
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BU of 5ljg by Molmil
Crystal structure of holo human CRBP1
Descriptor: PALMITIC ACID, Retinol-binding protein 1
Authors:Zanotti, G, Vallese, F, Berni, R, Menozzi, I.
Deposit date:2016-07-18
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.146 Å)
Cite:Structural and molecular determinants affecting the interaction of retinol with human CRBP1.
J. Struct. Biol., 197, 2017
5M2X
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BU of 5m2x by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
Descriptor: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
Deposit date:2016-10-13
Release date:2018-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.991 Å)
Cite:Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
5M15
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BU of 5m15 by Molmil
Synthetic nanobody in complex with MBP
Descriptor: Maltose-binding periplasmic protein, Synthetic nanobody L2_D09, (a-MBP#3)
Authors:Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2016-10-07
Release date:2017-11-15
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthetic single domain antibodies for the conformational trapping of membrane proteins.
Elife, 7, 2018
5LJK
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BU of 5ljk by Molmil
Crystal structure of human apo CRBP1
Descriptor: Retinol-binding protein 1, SODIUM ION
Authors:Zanotti, G, Vallese, F, Berni, R, Menozzi, I.
Deposit date:2016-07-18
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and molecular determinants affecting the interaction of retinol with human CRBP1.
J. Struct. Biol., 197, 2017
5LXQ
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BU of 5lxq by Molmil
Structure of PRL-1 in complex with the Bateman domain of CNNM2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Metal transporter CNNM2, Protein tyrosine phosphatase type IVA 1, ...
Authors:GIMENEZ-Mascarell, P, Oyenarte, I, Hardy, S, Breiderhoff, T, Stuiver, M, Kostantin, E, Diercks, T, Pey, A.L, Ereno-ORBEA, J, Martinez-Chantar, M.L, Khalaf-Nazzal, R, Claverie-Martin, F, Muller, D, Tremblay, M, Martinez-Cruz, L.A.
Deposit date:2016-09-22
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.335 Å)
Cite:Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1 with the Magnesium Transporter CNNM2.
J. Biol. Chem., 292, 2017
5LXG
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BU of 5lxg by Molmil
Revised crystal structure of the human adiponectin receptor 1 in an open conformation
Descriptor: Adiponectin receptor protein 1, SULFATE ION, V REGION HEAVY CHAIN, ...
Authors:Leyrat, C, Vasiliauskaite-Brooks, I, Granier, S.
Deposit date:2016-09-21
Release date:2017-03-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structural insights into adiponectin receptors suggest ceramidase activity.
Nature, 6, 2017
5M13
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BU of 5m13 by Molmil
Synthetic nanobody in complex with MBP
Descriptor: 1,2-ETHANEDIOL, Maltose-binding periplasmic protein, synthetic Nanobody L2_C06 (a-MBP#2)
Authors:Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2016-10-07
Release date:2017-11-15
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.372 Å)
Cite:Synthetic single domain antibodies for the conformational trapping of membrane proteins.
Elife, 7, 2018
5LY7
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BU of 5ly7 by Molmil
Crystal structure of NagZ H174A mutant from Pseudomonas aeruginosa in complex with the inhibitor 2-acetamido-1,2-dideoxynojirimycin
Descriptor: 2-ACETAMIDO-1,2-DIDEOXYNOJIRMYCIN, Beta-hexosaminidase, DI(HYDROXYETHYL)ETHER
Authors:Acebron, I, Artola-Recolons, C, Mahasenan, K, Mobashery, S, Hermoso, J.A.
Deposit date:2016-09-25
Release date:2017-05-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Catalytic Cycle of the N-Acetylglucosaminidase NagZ from Pseudomonas aeruginosa.
J. Am. Chem. Soc., 139, 2017
5M14
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BU of 5m14 by Molmil
Synthetic nanobody in complex with MBP
Descriptor: Maltose-binding periplasmic protein, synthetic Nanobody L2_G11 (a-MBP#2)
Authors:Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2016-10-07
Release date:2017-11-15
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synthetic single domain antibodies for the conformational trapping of membrane proteins.
Elife, 7, 2018
5LSR
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BU of 5lsr by Molmil
Carboxysome shell protein CcmP from Synechococcus elongatus PCC 7942
Descriptor: CcmP, THIOCYANATE ION
Authors:Larsson, A.M, Hasse, D, Valegard, K, Andersson, I.
Deposit date:2016-09-05
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of beta-carboxysome shell protein CcmP: ligand binding correlates with the closed or open central pore.
J. Exp. Bot., 68, 2017
5LJE
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BU of 5lje by Molmil
Crystal structure of holo human CRBP1/K40L,Q108L mutant
Descriptor: RETINOL, Retinol-binding protein 1, SODIUM ION
Authors:Zanotti, G, Vallese, F, Berni, R, Menozzi, I.
Deposit date:2016-07-18
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and molecular determinants affecting the interaction of retinol with human CRBP1.
J. Struct. Biol., 197, 2017
5E81
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BU of 5e81 by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G.
Deposit date:2015-10-13
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Nat Commun, 7, 2016
5EGM
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BU of 5egm by Molmil
Development of a novel tricyclic class of potent and selective FIXa inhibitors
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-chloranyl-~{N}-[(7~{S})-2-methyl-7-phenyl-10-(1~{H}-1,2,3,4-tetrazol-5-yl)-8,9-dihydro-6~{H}-pyrido[1,2-a]indol-7-yl]-4-(1,2,4-triazol-4-yl)benzamide, Coagulation factor IX, ...
Authors:Meng, D, Andre, P, Bateman, T.J, Berger, R, Chen, Y, Desai, K, Dewnani, S, Ellsworth, K, Feng, D, Geissler, W.M, Guo, L, Hruza, A, Jian, T, Li, H, Parker, D.L, Reichert, P, Sherer, E.C, Smith, C.J, Sonatore, L.M, Tschirret-Guth, R, Wu, J, Xu, J, Zhang, T, Campeau, L, Orr, R, Poirier, M, McCabe-Dunn, j, Araki, K, Nishimura, T, Sakurada, I, Hirabayashi, T, Wood, H.B.
Deposit date:2015-10-27
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.841 Å)
Cite:Development of a novel tricyclic class of potent and selective FIXa inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
9ESM
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BU of 9esm by Molmil
Archaellum filament from the Halobacterium salinarum deltaAgl26 strain
Descriptor: Archaellin, beta-D-glucopyranuronic acid-(1-4)-beta-D-glucopyranose
Authors:Grosmann-Haham, I, Shahar, A.
Deposit date:2024-03-26
Release date:2024-07-17
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Perturbed N-glycosylation of Halobacterium salinarum archaellum filaments leads to filament bundling and compromised cell motility.
Nat Commun, 15, 2024
5EM2
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BU of 5em2 by Molmil
Crystal structure of the Erb1-Ytm1 complex
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Ribosome biogenesis protein ERB1, ...
Authors:Ahmed, Y.L, Sinning, I.
Deposit date:2015-11-05
Release date:2015-12-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Concerted removal of the Erb1-Ytm1 complex in ribosome biogenesis relies on an elaborate interface.
Nucleic Acids Res., 44, 2016

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數據於2024-09-11公開中

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