Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17801 results

8SMN
DownloadVisualize
BU of 8smn by Molmil
Xenopus laevis hyaluronan synthase 1, nascent HA polymer bound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab15 heavy chain, Fab15 light chain, ...
Authors:Gorniak, I, Zimmer, J.
Deposit date:2023-04-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Atomistic insights into hyaluronan synthesis, secretion, and length control
To Be Published
8SMM
DownloadVisualize
BU of 8smm by Molmil
Xenopus laevis hyaluronan synthase 1
Descriptor: Fab15 heavy chain, Fab15 light chain, Hyaluronan synthase 1
Authors:Gorniak, I, Zimmer, J.
Deposit date:2023-04-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Atomistic insights into hyaluronan synthesis, secretion, and length control
To Be Published
8SMP
DownloadVisualize
BU of 8smp by Molmil
Xenopus laevis hyaluronan synthase 1, UDP-bound, gating loop inserted state
Descriptor: Fab15 heavy chain, Fab15 light chain, Hyaluronan synthase 1, ...
Authors:Gorniak, I, Zimmer, J.
Deposit date:2023-04-26
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Atomistic insights into hyaluronan synthesis, secretion, and length control
To Be Published
1MH5
DownloadVisualize
BU of 1mh5 by Molmil
The Structure Of The Complex Of The Fab Fragment Of The Esterolytic Antibody MS6-164 and A Transition-State Analog
Descriptor: IMMUNOGLOBULIN MS6-164, N-{[2-({[1-(4-CARBOXYBUTANOYL)AMINO]-2-PHENYLETHYL}-HYDROXYPHOSPHINYL)OXY]ACETYL}-2-PHENYLETHYLAMINE, SULFATE ION
Authors:Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
Deposit date:2002-08-19
Release date:2003-09-23
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity
J.Mol.Biol., 332, 2003
1M9X
DownloadVisualize
BU of 1m9x by Molmil
X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,A88M,G89A Complex.
Descriptor: Cyclophilin A, HIV-1 Capsid
Authors:Howard, B.R, Vajdos, F.F, Li, S, Sundquist, W.I, Hill, C.P.
Deposit date:2002-07-30
Release date:2003-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the catalytic mechanism of cyclophilin A
Nat.Struct.Biol., 10, 2003
7U5G
DownloadVisualize
BU of 7u5g by Molmil
ACS122 Fab
Descriptor: ACS122 Fab Heavy chain, ACS122 Fab Light chain
Authors:Farokhi, E, Stanfield, R.L, Wilson, I.A.
Deposit date:2022-03-02
Release date:2022-11-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Complementary antibody lineages achieve neutralization breadth in an HIV-1 infected elite neutralizer.
Plos Pathog., 18, 2022
1K30
DownloadVisualize
BU of 1k30 by Molmil
Crystal Structure Analysis of Squash (Cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase
Descriptor: glycerol-3-phosphate acyltransferase
Authors:Turnbull, A.P, Rafferty, J.B, Sedelnikova, S.E, Slabas, A.R, Schierer, T.P, Kroon, J.T, Simon, J.W, Fawcett, T, Nishida, I, Murata, N, Rice, D.W.
Deposit date:2001-10-01
Release date:2001-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Analysis of the structure, substrate specificity, and mechanism of squash glycerol-3-phosphate (1)-acyltransferase.
Structure, 9, 2001
1JGN
DownloadVisualize
BU of 1jgn by Molmil
Solution structure of the C-terminal PABC domain of human poly(A)-binding protein in complex with the peptide from Paip2
Descriptor: polyadenylate-binding protein 1, polyadenylate-binding protein-interacting protein 2
Authors:Kozlov, G, Siddiqui, N, Coillet-Matillon, S, Ekiel, I, Gehring, K.
Deposit date:2001-06-26
Release date:2003-06-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis of ligand recognition by PABC, a highly specific peptide-binding domain found in poly(A)-binding protein and a HECT ubiquitin ligase
EMBO J., 23, 2004
4N5K
DownloadVisualize
BU of 4n5k by Molmil
Crystal structure of hemagglutinin from an H7N9 influenza virus in complex with LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2013-10-10
Release date:2013-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7053 Å)
Cite:Preferential recognition of avian-like receptors in human influenza A H7N9 viruses.
Science, 342, 2013
1M9N
DownloadVisualize
BU of 1m9n by Molmil
CRYSTAL STRUCTURE OF THE HOMODIMERIC BIFUNCTIONAL TRANSFORMYLASE AND CYCLOHYDROLASE ENZYME AVIAN ATIC IN COMPLEX WITH AICAR AND XMP AT 1.93 ANGSTROMS.
Descriptor: AICAR TRANSFORMYLASE-IMP CYCLOHYDROLASE, AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, POTASSIUM ION, ...
Authors:Wolan, D.W, Greasly, S.E, Beardsley, G.P, Wilson, I.A.
Deposit date:2002-07-29
Release date:2003-01-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Insights into the Avian AICAR Transformylase Mechanism.
Biochemistry, 41, 2002
1MEJ
DownloadVisualize
BU of 1mej by Molmil
Human Glycinamide Ribonucleotide Transformylase domain at pH 8.5
Descriptor: GLYCEROL, PHOSPHATE ION, Phosphoribosylglycinamide formyltransferase
Authors:Zhang, Y, Desharnais, J, Greasley, S.E, Beardsley, G.P, Boger, D.L, Wilson, I.A.
Deposit date:2002-08-08
Release date:2002-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of human GAR Tfase of low and high pH and with substrate beta-GAR
Biochemistry, 41, 2002
4N5J
DownloadVisualize
BU of 4n5j by Molmil
Crystal structure of hemagglutinin from an H7N9 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2013-10-10
Release date:2013-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Preferential recognition of avian-like receptors in human influenza A H7N9 viruses.
Science, 342, 2013
1MJU
DownloadVisualize
BU of 1mju by Molmil
1.22 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF ESTEROLYTIC ANTIBODY MS6-12
Descriptor: GLYCEROL, IMMUNOGLOBULIN MS6-12
Authors:Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
Deposit date:2002-08-28
Release date:2003-09-23
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity
J.Mol.Biol., 332, 2003
1MKI
DownloadVisualize
BU of 1mki by Molmil
Crystal Structure of Bacillus Subtilis Probable Glutaminase, APC1040
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Probable Glutaminase ybgJ
Authors:Kim, Y, Dementieva, I, Vinokour, E, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-08-29
Release date:2003-06-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
1MK6
DownloadVisualize
BU of 1mk6 by Molmil
SOLUTION STRUCTURE OF THE 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXY-AFLATOXIN B1 ADDUCT MISPAIRED WITH DEOXYADENOSINE
Descriptor: 5'-D(*AP*CP*AP*TP*CP*GP*AP*TP*CP*T)-3', 5'-D(*AP*GP*AP*TP*AP*GP*AP*TP*GP*T)-3', 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1
Authors:Giri, I, Johnston, D.S, Stone, M.P.
Deposit date:2002-08-28
Release date:2002-10-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:MISPAIRING OF THE 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXY-AFLATOXIN B1 ADDUCT WITH DEOXYADENOSINE RESULTS IN EXTRUSION OF THE MISMATCHED DA TOWARD THE MAJOR GROOVE
Biochemistry, 41, 2002
4AY1
DownloadVisualize
BU of 4ay1 by Molmil
Human YKL-39 is a pseudo-chitinase with retained chitooligosaccharide binding properties
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHITINASE-3-LIKE PROTEIN 2
Authors:Schimpl, M, Rush, C.L, Betou, M, Eggleston, I.M, Penman, G.A, Recklies, A.D, van Aalten, D.M.F.
Deposit date:2012-06-17
Release date:2012-08-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Human Ykl-39 is a Pseudo-Chitinase with Retained Chitooligosaccharide-Binding Properties.
Biochem.J., 446, 2012
1MMN
DownloadVisualize
BU of 1mmn by Molmil
X-RAY STRUCTURES OF THE MGADP, MGATPGAMMAS, AND MGAMPPNP COMPLEXES OF THE DICTYOSTELIUM DISCOIDEUM MYOSIN MOTOR DOMAIN
Descriptor: MAGNESIUM ION, MYOSIN, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Gulick, A.M, Bauer, C.B, Thoden, J.B, Rayment, I.
Deposit date:1997-07-18
Release date:1997-12-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structures of the MgADP, MgATPgammaS, and MgAMPPNP complexes of the Dictyostelium discoideum myosin motor domain.
Biochemistry, 36, 1997
1MPY
DownloadVisualize
BU of 1mpy by Molmil
STRUCTURE OF CATECHOL 2,3-DIOXYGENASE (METAPYROCATECHASE) FROM PSEUDOMONAS PUTIDA MT-2
Descriptor: ACETONE, CATECHOL 2,3-DIOXYGENASE, FE (II) ION
Authors:Kita, A, Kita, S, Fujisawa, I, Inaka, K, Ishida, T, Horiike, K, Nozaki, M, Miki, K.
Deposit date:1998-10-20
Release date:1999-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2.
Structure Fold.Des., 7, 1999
1MEP
DownloadVisualize
BU of 1mep by Molmil
Crystal Structure of Streptavidin Double Mutant S45A/D128A with Biotin: Cooperative Hydrogen-Bond Interactions in the Streptavidin-Biotin System.
Descriptor: BIOTIN, Streptavidin
Authors:Hyre, D.E, Le Trong, I, Merritt, E.A, Stenkamp, R.E, Green, N.M, Stayton, P.S.
Deposit date:2002-08-08
Release date:2003-09-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Cooperative hydrogen bond interactions in the streptavidin-biotin system
Protein Sci., 15, 2006
4CXF
DownloadVisualize
BU of 4cxf by Molmil
Structure of CnrH in complex with the cytosolic domain of CnrY
Descriptor: CHLORIDE ION, CNRY, RNA POLYMERASE SIGMA FACTOR CNRH, ...
Authors:Maillard, A.P, Girard, E, Ziani, W, Petit-Hartlein, I, Kahn, R, Coves, J.
Deposit date:2014-04-07
Release date:2014-04-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Crystal Structure of the Anti-Sigma Factor Cnry in Complex with the Sigma Factor Cnrh Shows a New Structural Class of Anti- Sigma Factors Targeting Extracytoplasmic-Function Sigma Factors.
J.Mol.Biol., 426, 2014
1P80
DownloadVisualize
BU of 1p80 by Molmil
Crystal structure of the D181Q variant of catalase HPII from E. coli
Descriptor: Catalase HPII, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chelikani, P, Carpena, X, Fita, I, Loewen, P.C.
Deposit date:2003-05-06
Release date:2003-09-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:An electrical potential in the access channel of catalases enhances catalysis
J.Biol.Chem., 278, 2003
4NDD
DownloadVisualize
BU of 4ndd by Molmil
X-ray structure of a double mutant of calexcitin - a neuronal calcium-signalling protein
Descriptor: CALCIUM ION, Calexcitin
Authors:Erskine, P.T, Fokas, A, Muriithi, C, Razzall, E, Bowyer, A, Findlow, I.S, Werner, J.M, Wallace, B.A, Wood, S.P, Cooper, J.B.
Deposit date:2013-10-25
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray, spectroscopic and normal-mode dynamics of calexcitin: structure-function studies of a neuronal calcium-signalling protein.
Acta Crystallogr.,Sect.D, 71, 2015
8SFJ
DownloadVisualize
BU of 8sfj by Molmil
WT CRISPR-Cas12a with a 10bp R-loop
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*AP*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:WT CRISPR-Cas12a with a 10bp R-loop
To Be Published
8SFQ
DownloadVisualize
BU of 8sfq by Molmil
WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
To Be Published
2IW4
DownloadVisualize
BU of 2iw4 by Molmil
CRYSTAL STRUCTURE OF BASILLUS SUBTILIS FAMILY II INORGANIC PYROPHOSPHATASE MUTANT, H98Q, IN COMPLEX WITH PNP
Descriptor: FE (III) ION, GLYCEROL, IMIDODIPHOSPHORIC ACID, ...
Authors:Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A.
Deposit date:2006-06-26
Release date:2006-11-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Trimetal Site and Substrate Distortion in a Family II Inorganic Pyrophosphatase.
J.Biol.Chem., 282, 2007

223532

건을2024-08-07부터공개중

PDB statisticsPDBj update infoContact PDBjnumon