Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17892 件

6OFN
DownloadVisualize
BU of 6ofn by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, T203(3-OMeY); ih circular permutant (50-51)
分子名称: Green fluorescent protein (GFP); S65T, T203(3-OMeY); ih circular permutant (50-51)
著者Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
登録日2019-03-31
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.649 Å)
主引用文献Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
4R11
DownloadVisualize
BU of 4r11 by Molmil
A conserved phosphorylation switch controls the interaction between cadherin and beta-catenin in vitro and in vivo
分子名称: Cadherin-related hmr-1, IODIDE ION, Protein humpback-2
著者Choi, H.-J, Loveless, T, Lynch, A, Bang, I, Hardin, J, Weis, W.I.
登録日2014-08-03
公開日2015-04-29
実験手法X-RAY DIFFRACTION (2.789 Å)
主引用文献A Conserved Phosphorylation Switch Controls the Interaction between Cadherin and beta-Catenin In Vitro and In Vivo
Dev.Cell, 33, 2015
2LLP
DownloadVisualize
BU of 2llp by Molmil
Solution structure of a THP type 1 alpha 1 collagen fragment (772-786)
分子名称: Collagen alpha-1(I) chain
著者Bertini, I, Fragai, M, Luchinat, C, Melikian, M, Toccafondi, M, Lauer, J.L, Fields, G.B, Structural Proteomics in Europe 2 (SPINE-2)
登録日2011-11-15
公開日2012-05-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for matrix metalloproteinase 1-catalyzed collagenolysis.
J.Am.Chem.Soc., 134, 2012
5M7P
DownloadVisualize
BU of 5m7p by Molmil
Crystal structure of NtrX from Brucella abortus in complex with ADP processed with the CrystalDirect automated mounting and cryo-cooling technology
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nitrogen assimilation regulatory protein
著者Cornaciu, I, Fernandez, I, Hoffmann, G, Carrica, M.C, Goldbaum, F.A, Marquez, J.A.
登録日2016-10-28
公開日2017-01-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Three-Dimensional Structure of Full-Length NtrX, an Unusual Member of the NtrC Family of Response Regulators.
J. Mol. Biol., 429, 2017
5MAB
DownloadVisualize
BU of 5mab by Molmil
FoxE P3121 crystal structure of Rhodopseudomonas ferrooxidans SW2 putative iron oxidase
分子名称: COPPER (II) ION, FoxE, HEME C, ...
著者Pereira, L, Saraiva, I.H, Oliveira, A.S, Soares, C, Gomes, R.O, Frazao, C.
登録日2016-11-03
公開日2017-12-20
実験手法X-RAY DIFFRACTION (2.436 Å)
主引用文献FoxE P3121 crystal structure of Rhodopseudomonas ferrooxidans SW2 putative iron oxidase
To be published
5JRF
DownloadVisualize
BU of 5jrf by Molmil
Crystal structure of the light-driven sodium pump KR2 bound with iodide ions
分子名称: EICOSANE, IODIDE ION, Sodium pumping rhodopsin
著者Melnikov, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gushchin, I, Popov, A, Gordeliy, V.
登録日2016-05-06
公開日2017-05-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fast iodide-SAD phasing for high-throughput membrane protein structure determination.
Sci Adv, 3, 2017
7OJ2
DownloadVisualize
BU of 7oj2 by Molmil
Bacillus subtilis IMPDH in complex with Ap4A
分子名称: GLYCEROL, Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase, PHOSPHATE ION
著者Giammarinaro, P.I, Bange, G.
登録日2021-05-13
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Diadenosine tetraphosphate regulates biosynthesis of GTP in Bacillus subtilis.
Nat Microbiol, 7, 2022
7OJ1
DownloadVisualize
BU of 7oj1 by Molmil
Bacillus subtilis IMPDH in complex with Ap4A
分子名称: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
著者Giammarinaro, P.I, Bange, G.
登録日2021-05-13
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Diadenosine tetraphosphate regulates biosynthesis of GTP in Bacillus subtilis.
Nat Microbiol, 7, 2022
6OFL
DownloadVisualize
BU of 6ofl by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
分子名称: Green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
著者Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
登録日2019-03-31
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
2LU5
DownloadVisualize
BU of 2lu5 by Molmil
Structure and chemical shifts of Cu(I),Zn(II) superoxide dismutase by solid-state NMR
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn]
著者Knight, M.J, Pell, A.J, Bertini, I, Felli, I.C, Gonnelli, L, Pierattelli, R, Herrmann, T, Emsley, L, Pintacuda, G.
登録日2012-06-08
公開日2012-06-27
最終更新日2023-06-14
実験手法SOLID-STATE NMR
主引用文献Structure and backbone dynamics of a microcrystalline metalloprotein by solid-state NMR.
Proc.Natl.Acad.Sci.USA, 109, 2012
1MUJ
DownloadVisualize
BU of 1muj by Molmil
Crystal structure of murine class II MHC I-Ab in complex with a human CLIP peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CLIP peptide, H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, ...
著者Zhu, Y, Wilson, I.A.
登録日2002-09-23
公開日2003-02-18
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of MHC class II I-Ab in complex with a human CLIP peptide: Prediction of an I-Ab peptide-binding motif
J.Mol.Biol., 326, 2003
8QVO
DownloadVisualize
BU of 8qvo by Molmil
L211Q, L254N, T262G mutant of carboxypeptidase T from Thermoactinomyces vulgaris
分子名称: CALCIUM ION, Carboxypeptidase T, SULFATE ION, ...
著者Timofeev, V.I, Dorovatovskii, P.V, Lazarenko, V.A, Akparov, V.K, Kuranova, I.P.
登録日2023-10-18
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献L211Q, L254N, T262G mutant of carboxypeptidase T from Thermoactinomyces vulgaris
To Be Published
8DTX
DownloadVisualize
BU of 8dtx by Molmil
Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV89-22
分子名称: COV89-22 heavy chain, COV89-22 light chain, Spike protein S2' stem helix peptide
著者Lin, T.H, Lee, C.C.D, Wilson, I.A.
登録日2022-07-26
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rare, convergent antibodies targeting the stem helix broadly neutralize diverse betacoronaviruses.
Cell Host Microbe, 31, 2023
8DTR
DownloadVisualize
BU of 8dtr by Molmil
Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV30-14
分子名称: COV30-14 heavy chain, COV30-14 light chain, Spike protein S2' stem helix peptide
著者Lee, C.C.D, Lin, T.H, Wilson, I.A.
登録日2022-07-26
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rare, convergent antibodies targeting the stem helix broadly neutralize diverse betacoronaviruses.
Cell Host Microbe, 31, 2023
4QRQ
DownloadVisualize
BU of 4qrq by Molmil
Crystal Structure of HLA B*0801 in complex with HSKKKCDEL
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
著者Gras, S, Berry, R, Lucet, I.S, Rossjohn, J.
登録日2014-07-02
公開日2014-11-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An Extensive Antigenic Footprint Underpins Immunodominant TCR Adaptability against a Hypervariable Viral Determinant.
J.Immunol., 193, 2014
8DTT
DownloadVisualize
BU of 8dtt by Molmil
Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV93-03
分子名称: COV93-03 heavy chain, COV93-03 light chain, Spike protein S2' stem helix peptide
著者Lee, C.C.D, Lin, T.H, Wilson, I.A.
登録日2022-07-26
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Rare, convergent antibodies targeting the stem helix broadly neutralize diverse betacoronaviruses.
Cell Host Microbe, 31, 2023
6OFO
DownloadVisualize
BU of 6ofo by Molmil
Crystal structure of split green fluorescent protein (GFP); s10 circular permutant (194-195)
分子名称: Green fluorescent protein (GFP); s10 circular permutant (194-195)
著者Lin, C.-Y, Romei, M.G, Deller, M.C, Doukov, T.I, Boxer, S.G.
登録日2019-03-31
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
8AMQ
DownloadVisualize
BU of 8amq by Molmil
Crystal structure of the complex CYP143-FdxE from M. tuberculosis
分子名称: FE3-S4 CLUSTER, NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Bukhdruker, S, Varaksa, T, Smolskaya, S, Marin, E, Kapranov, I, Kovalev, K, Gilep, A, Strushkevich, N, Borshchevskiy, V.
登録日2022-08-03
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into 3Fe-4S ferredoxins diversity in M. tuberculosis highlighted by a first redox complex with P450.
Front Mol Biosci, 9, 2022
2IV0
DownloadVisualize
BU of 2iv0 by Molmil
Thermal stability of isocitrate dehydrogenase from Archaeoglobus fulgidus studied by crystal structure analysis and engineering of chimers
分子名称: CHLORIDE ION, ISOCITRATE DEHYDROGENASE, ZINC ION
著者Stokke, R, Karlstrom, M, Yang, N, Leiros, I, Ladenstein, R, Birkeland, N.K, Steen, I.H.
登録日2006-06-08
公開日2007-04-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Thermal Stability of Isocitrate Dehydrogenase from Archaeoglobus Fulgidus Studied by Crystal Structure Analysis and Engineering of Chimers
Extremophiles, 11, 2007
4XTN
DownloadVisualize
BU of 4xtn by Molmil
Crystal structure of the light-driven sodium pump KR2 in the pentameric red form, pH 4.9
分子名称: EICOSANE, SODIUM ION, Sodium pumping rhodopsin, ...
著者Gushchin, I, Shevchenko, V, Polovinkin, V, Gordeliy, V.
登録日2015-01-23
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a light-driven sodium pump.
Nat.Struct.Mol.Biol., 22, 2015
5MIH
DownloadVisualize
BU of 5mih by Molmil
Crystal structure of the lectin LecA from Pseudomonas aeruginosa in complex with a phenyl-epoxy-galactopyranoside
分子名称: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CALCIUM ION, PA-I galactophilic lectin, ...
著者Wagner, S, Hauk, D, Hofmann, M, Joachim, I, Sommer, R, Muller, R, Imberty, A, Varrot, A, Titz, A.
登録日2016-11-28
公開日2017-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Covalent Lectin Inhibition and Application in Bacterial Biofilm Imaging.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MU8
DownloadVisualize
BU of 5mu8 by Molmil
HUMAN TNF-ALPHA IN COMPLEX WITH JNJ525
分子名称: Tumor necrosis factor, ~{N}4-(phenylmethyl)-~{N}4-[2-[3-(2-piperazin-1-ylpyrimidin-5-yl)phenyl]phenyl]pyrimidine-2,4-diamine
著者Blevitt, J.M, Hack, M.D, Herman, K.L, Jackson, P.F, Krawczuk, P.J, Lebsack, A.D, Liu, A.X, Mirzadegan, T, Nelen, M.I, Patrick, A.P, Steinbacher, S, Milla, M.E, Lumb, K.J.
登録日2017-01-12
公開日2017-03-29
最終更新日2019-02-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis of Small-Molecule Aggregate Induced Inhibition of a Protein-Protein Interaction.
J. Med. Chem., 60, 2017
4R0N
DownloadVisualize
BU of 4r0n by Molmil
Hexagonal form of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis
分子名称: Phosphopantetheine adenylyltransferase, SULFATE ION
著者Timofeev, V.I, Smirnova, E.A, Chupova, L.A, Esipov, R.S, Kuranova, I.P.
登録日2014-08-01
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hexagonal form of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis
TO BE PUBLISHED
7Q0H
DownloadVisualize
BU of 7q0h by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-50 and Beta-54
分子名称: Beta-50 Fab heavy chain, Beta-50 Fab light chain, Beta-54 Fab heavy chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-10-14
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022
8K3Y
DownloadVisualize
BU of 8k3y by Molmil
The "5+1" heteromeric structure of Lon protease consisting of a spiral pentamer with Y224S mutation and an N-terminal-truncated monomeric E613K mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lon protease
著者Li, S, Hsieh, K.Y, Kuo, C.I, Zhang, K, Chang, C.I.
登録日2023-07-17
公開日2023-10-25
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (4.42 Å)
主引用文献A 5+1 assemble-to-activate mechanism of the Lon proteolytic machine.
Nat Commun, 14, 2023

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon