Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17822 件

3R0Y
DownloadVisualize
BU of 3r0y by Molmil
Crystal Structures of Multidrug-resistant HIV-1 Protease in Complex with Mechanism-Based Aspartyl Protease Inhibitors
分子名称: Multidrug-resistant clinical isolate 769 HIV-1 Protease, N-[(2S)-1-{[(2S,3S)-3-hydroxy-5-oxo-5-{[(2R)-1-oxo-3-phenyl-1-(prop-2-yn-1-ylamino)propan-2-yl]amino}-1-phenylpentan-2-yl]amino}-3-methyl-1-oxobutan-2-yl]pyridine-2-carboxamide
著者Yedidi, R.S, Gupta, D, Liu, Z, Brunzelle, J, Kovari, I.A, Woster, P.M, Kovari, L.C.
登録日2011-03-09
公開日2012-04-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of multidrug-resistant HIV-1 protease in complex with two potent anti-malarial compounds.
Biochem.Biophys.Res.Commun., 421, 2012
3VII
DownloadVisualize
BU of 3vii by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Bis-Tris
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, GLYCEROL, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VOA
DownloadVisualize
BU of 3voa by Molmil
Staphylococcus aureus FtsZ 12-316 GDP-form
分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Yamane, J, Matsui, T, Mogi, N, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3RJZ
DownloadVisualize
BU of 3rjz by Molmil
X-ray crystal structure of the putative n-type atp pyrophosphatase from pyrococcus furiosus, the northeast structural genomics target pfr23
分子名称: N-type ATP pyrophosphatase superfamily
著者Forouhar, F, Lee, I, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-04-16
公開日2011-05-11
最終更新日2012-01-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A large conformational change in the putative ATP pyrophosphatase PF0828 induced by ATP binding.
Acta Crystallogr.,Sect.F, 67, 2011
4AQQ
DownloadVisualize
BU of 4aqq by Molmil
Dodecahedron formed of penton base protein from adenovirus Ad3
分子名称: CALCIUM ION, L2 PROTEIN III (PENTON BASE)
著者Burmeister, W.P, Szolajska, E, Zochowska, M, Nerlo, B, Andreev, I, Schoehn, G, Andrieu, J.-P, Fender, P, Naskalska, A, Zubieta, C, Cusack, S, Chroboczek, J.
登録日2012-04-19
公開日2012-10-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (4.75 Å)
主引用文献The Structural Basis for the Integrity of Adenovirus Ad3 Dodecahedron.
Plos One, 7, 2012
4A1N
DownloadVisualize
BU of 4a1n by Molmil
Human Mitochondrial endo-exonuclease
分子名称: CHLORIDE ION, MAGNESIUM ION, NUCLEASE EXOG, ...
著者Welin, M, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Graslund, S, Hammarstrom, M, Johansson, I, Karlberg, T, Kotenyova, T, Nyman, T, Persson, C, Schuler, H, Thorsell, A.G, Tresaugues, L, Weigelt, J, Nordlund, P.
登録日2011-09-16
公開日2012-02-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Human Mitochondrial Endo-Exonuclease
To be Published
4A9R
DownloadVisualize
BU of 4a9r by Molmil
CRYSTAL STRUCTURE OF HUMAN CHK2 IN COMPLEX WITH BENZIMIDAZOLE CARBOXAMIDE INHIBITOR
分子名称: 1,2-ETHANEDIOL, 2-[4-(4-CHLOROPHENOXY)PHENYL]-1H-BENZIMIDAZOLE-6-CARBOXAMIDE, NITRATE ION, ...
著者Matijssen, C, Silva-Santisteban, M.C, Westwood, I.M, Siddique, S, Choi, V, Sheldrake, P, van Montfort, R.L.M, Blagg, J.
登録日2011-11-28
公開日2012-10-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Benzimidazole Inhibitors of the Protein Kinase Chk2: Clarification of the Binding Mode by Flexible Side Chain Docking and Protein-Ligand Crystallography
Bioorg.Med.Chem., 20, 2012
4AIM
DownloadVisualize
BU of 4aim by Molmil
Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide
分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ...
著者Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F.
登録日2012-02-10
公開日2012-04-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly.
Open Biol., 2, 2012
4AEM
DownloadVisualize
BU of 4aem by Molmil
Structural and biochemical characterization of a novel Carbohydrate Binding Module of endoglucanase Cel5A from Eubacterium cellulosolvens
分子名称: ENDOGLUCANASE CEL5A
著者Luis, A.S, Venditto, I, Prates, J.A.M, Ferreira, L.M.A, Gilbert, H.J, Fontes, C.M.G.A, Najmudin, S.
登録日2012-01-11
公開日2013-01-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Understanding How Non-Catalytic Carbohydrate Binding Modules Can Display Specificity for Xyloglucan
J.Biol.Chem., 288, 2013
3WBK
DownloadVisualize
BU of 3wbk by Molmil
crystal structure analysis of eukaryotic translation initiation factor 5B and 1A complex
分子名称: Eukaryotic translation initiation factor 1A, Eukaryotic translation initiation factor 5B
著者Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-05-20
公開日2014-11-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A
Acta Crystallogr.,Sect.D, 70, 2014
3WA1
DownloadVisualize
BU of 3wa1 by Molmil
Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus
分子名称: BinB protein
著者Srisucharitpanit, K, Yao, M, Chimnaronk, S, Promdonkoy, B, Boonserm, P, Tanaka, I.
登録日2013-04-22
公開日2014-07-02
最終更新日2014-10-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus
Proteins, 82, 2014
3S29
DownloadVisualize
BU of 3s29 by Molmil
The crystal structure of sucrose synthase-1 from Arabidopsis thaliana and its functional implications.
分子名称: MALONIC ACID, POTASSIUM ION, SULFATE ION, ...
著者Zheng, Y.I, Garavito, R.M.
登録日2011-05-16
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The Structure of Sucrose Synthase-1 from Arabidopsis thaliana and Its Functional Implications.
J.Biol.Chem., 286, 2011
3TZH
DownloadVisualize
BU of 3tzh by Molmil
Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (FabG)(F187A) from Vibrio cholerae
分子名称: 3-oxoacyl-[acyl-carrier protein] reductase, GLYCEROL, SULFATE ION, ...
著者Hou, J, Chruszcz, M, Zheng, H, Cooper, D.R, Osinski, T, Shumilin, I, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-09-27
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献

3WEH
DownloadVisualize
BU of 3weh by Molmil
Crystal structure of the human squalene synthase in complex with presqualene pyrophosphate
分子名称: MAGNESIUM ION, Squalene synthase, {(1R,2R,3R)-2-[(3E)-4,8-dimethylnona-3,7-dien-1-yl]-2-methyl-3-[(1E,5E)-2,6,10-trimethylundeca-1,5,9-trien-1-yl]cyclopropyl}methyl trihydrogen diphosphate
著者Liu, C.I, Jeng, W.Y, Wang, A.H.J.
登録日2013-07-07
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural insights into the catalytic mechanism of human squalene synthase.
Acta Crystallogr.,Sect.D, 70, 2014
3TLP
DownloadVisualize
BU of 3tlp by Molmil
Crystal structure of the fourth bromodomain of human poly-bromodomain containing protein 1 (PB1)
分子名称: NICKEL (II) ION, Protein polybromo-1
著者Filippakopoulos, P, Felletar, I, Picaud, S, Keates, T, Muniz, J, Krojer, T, Allerston, C.K, Latwiel, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2011-08-30
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3TLJ
DownloadVisualize
BU of 3tlj by Molmil
Crystal structure of Trm14 from Pyrococcus furiosus in complex with S-adenosyl-L-homocysteine
分子名称: ACETATE ION, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine N2-)-methyltransferase Trm14
著者Fislage, M, Roovers, M, Tuszynska, I, Bujnicki, J.M, Droogmans, L, Versees, W.
登録日2011-08-30
公開日2012-03-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the tRNA:m2G6 methyltransferase Trm14/TrmN from two domains of life.
Nucleic Acids Res., 40, 2012
3TM5
DownloadVisualize
BU of 3tm5 by Molmil
Crystal structure of Trm14 from Pyrococcus furiosus in complex with sinefungin
分子名称: Crystal structure of Trm14, SINEFUNGIN
著者Fislage, M, Roovers, M, Tuszynska, I, Bujnicki, J.M, Droogmans, L, Versees, W.
登録日2011-08-31
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structures of the tRNA:m2G6 methyltransferase Trm14/TrmN from two domains of life.
Nucleic Acids Res., 40, 2012
3R2I
DownloadVisualize
BU of 3r2i by Molmil
Crystal Structure of Superantigen-like Protein, Exotoxin SACOL0473 from Staphylococcus aureus subsp. aureus COL
分子名称: Exotoxin 5
著者Filippova, E.V, Minasov, G, Halavaty, A, Shuvalova, L, Winsor, J, Dubrovska, I, Kiryukhina, O, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-14
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Superantigen-like Protein, Exotoxin SACOL0473 from Staphylococcus aureus subsp. aureus COL
TO BE PUBLISHED
3R4Y
DownloadVisualize
BU of 3r4y by Molmil
Crystal structure of alpha-neoagarobiose hydrolase (ALPHA-NABH) from Saccharophagus degradans 2-40
分子名称: Glycosyl hydrolase family 32, N terminal
著者Lee, S, Lee, J.Y, Ha, S.C, Shin, D.H, Kim, K.H, Bang, W.G, Kim, S.H, Choi, I.G.
登録日2011-03-18
公開日2012-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a key enzyme in the agarolytic pathway, alpha-neoagarobiose hydrolase from Saccharophagus degradans 2-40
Biochem.Biophys.Res.Commun., 412, 2011
3WRE
DownloadVisualize
BU of 3wre by Molmil
The crystal structure of native HypBA1 from Bifidobacterium longum JCM 1217
分子名称: Non-reducing end beta-L-arabinofuranosidase, ZINC ION
著者Huang, C.H, Zhu, Z, Cheng, Y.S, Chan, H.C, Ko, T.P, Chen, C.C, Wang, I, Ho, M.R, Hsu, S.T, Zeng, Y.F, Huang, Y.N, Liu, J.R, Guo, R.T.
登録日2014-02-25
公開日2014-09-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structure and Catalytic Mechanism of a Glycoside Hydrolase Family-127 beta-L-Arabinofuranosidase (HypBA1)
J BIOPROCESS BIOTECH, 4, 2014
3W5K
DownloadVisualize
BU of 3w5k by Molmil
Crystal structure of Snail1 and importin beta complex
分子名称: Importin subunit beta-1, ZINC ION, Zinc finger protein SNAI1
著者Choi, S, Yamashita, E, Yasuhara, N, Song, J, Son, S.Y, Won, Y.H, Shin, Y.S, Sekimoto, T, Park, I.Y, Yoneda, Y, Lee, S.J.
登録日2013-01-30
公開日2014-03-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the selective nuclear import of the C2H2 zinc-finger protein Snail by importin beta.
Acta Crystallogr.,Sect.D, 70, 2014
3RR5
DownloadVisualize
BU of 3rr5 by Molmil
DNA ligase from the archaeon Thermococcus sp. 1519
分子名称: DNA ligase, MAGNESIUM ION
著者Petrova, T, Bezsudnova, E.Y, Boyko, K.M, Mardanov, A.V, Popov, V.O, Polyakov, K.M, Ravin, N.V, Shabalin, I.G, Skryabin, K.G, Stekhanova, T.N, Kovalchuk, M.V.
登録日2011-04-29
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.018 Å)
主引用文献ATP-dependent DNA ligase from Thermococcus sp. 1519 displays a new arrangement of the OB-fold domain.
Acta Crystallogr.,Sect.F, 68, 2012
3R61
DownloadVisualize
BU of 3r61 by Molmil
Structure of the MntR Co2+ Complex
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, COBALT (II) ION, Transcriptional regulator mntR
著者Glasfeld, A, Brophy, M.B, Kliegman, J.I, Griner, S.L, Nix, J.C.
登録日2011-03-20
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9002 Å)
主引用文献Roles of the A and C Sites in the Manganese-Specific Activation of MntR.
Biochemistry, 52, 2013
3R6M
DownloadVisualize
BU of 3r6m by Molmil
Crystal structure of Vibrio parahaemolyticus YeaZ
分子名称: YeaZ, resuscitation promoting factor
著者Roujeinikova, A, Aydin, I.
登録日2011-03-21
公開日2011-09-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Analysis of the Essential Resuscitation Promoting Factor YeaZ Suggests a Mechanism of Nucleotide Regulation through Dimer Reorganization.
Plos One, 6, 2011
3WGJ
DownloadVisualize
BU of 3wgj by Molmil
STAPHYLOCOCCUS AUREUS FTSZ T7 chimera mutant, T7Bs
分子名称: CALCIUM ION, Cell division protein FtsZ
著者Matsui, T, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.179 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon