Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17965 件

4FAE
DownloadVisualize
BU of 4fae by Molmil
Substrate p2/NC in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant
分子名称: HIV-1 protease, Substrate p2/NC peptide
著者Wang, Y, Dewdney, T.G, Liu, Z, Reiter, S.J, Brunzelle, J.S, Kovari, I.A, Kovari, L.C.
登録日2012-05-22
公開日2012-08-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Higher Desolvation Energy Reduces Molecular Recognition in Multi-Drug Resistant HIV-1 Protease.
Biology (Basel), 1, 2012
4FLS
DownloadVisualize
BU of 4fls by Molmil
Crystal structure of Amylosucrase inactive double mutant F290K-E328Q from Neisseria polysaccharea in complex with sucrose.
分子名称: Amylosucrase, CHLORIDE ION, GLYCEROL, ...
著者Guerin, F, Champion, E, Moulis, C, Barbe, S, Tran, T.H, Morel, S, Descroix, K, Monsan, P, Mulard, L.A, Remaud-Simeon, M, Andre, I, Mourey, L, Tranier, S.
登録日2012-06-15
公開日2012-10-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Applying pairwise combinations of amino Acid mutations for sorting out highly efficient glucosylation tools for chemo-enzymatic synthesis of bacterial oligosaccharides.
J.Am.Chem.Soc., 134, 2012
4FH5
DownloadVisualize
BU of 4fh5 by Molmil
Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - MgUTP bound
分子名称: MAGNESIUM ION, Poly(A) RNA polymerase protein cid1, URIDINE 5'-TRIPHOSPHATE
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-05
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHY
DownloadVisualize
BU of 4fhy by Molmil
Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - Mg 3'-dATP bound
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) RNA polymerase protein cid1
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-07
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHP
DownloadVisualize
BU of 4fhp by Molmil
Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - CaUTP bound
分子名称: CALCIUM ION, GLYCEROL, Poly(A) RNA polymerase protein cid1, ...
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-06
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
3UKD
DownloadVisualize
BU of 3ukd by Molmil
UMP/CMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP, AND ALF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CYTIDINE-5'-MONOPHOSPHATE, ...
著者Schlichting, I, Reinstein, J.
登録日1997-05-20
公開日1998-05-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of active conformations of UMP kinase from Dictyostelium discoideum suggest phosphoryl transfer is associative.
Biochemistry, 36, 1997
3VF1
DownloadVisualize
BU of 3vf1 by Molmil
Structure of a calcium-dependent 11R-lipoxygenase suggests a mechanism for Ca-regulation
分子名称: 11R-lipoxygenase, FE (II) ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Eek, P, Jarving, R, Jarving, I, Gilbert, N.C, Newcomer, M.E, Samel, N.
登録日2012-01-09
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.473 Å)
主引用文献Structure of a Calcium-dependent 11R-Lipoxygenase Suggests a Mechanism for Ca2+ Regulation.
J.Biol.Chem., 287, 2012
3QFK
DownloadVisualize
BU of 3qfk by Molmil
2.05 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with alpha-ketoglutarate
分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Minasov, G, Wawrzak, Z, Krishna, S.N, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Kiryukhina, O, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-01-21
公開日2011-02-09
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献2.05 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with alpha-ketoglutarate.
TO BE PUBLISHED
4GCO
DownloadVisualize
BU of 4gco by Molmil
Central domain of stress-induced protein-1 (STI-1) from C.elegans
分子名称: Protein STI-1
著者Osipiuk, J, Bigelow, L, Gu, M, Van Oosten-Hawle, P, Morimoto, R.I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2012-07-30
公開日2012-08-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Central domain of stress-induced protein-1 (STI-1) from C.elegans
To be Published
3VLM
DownloadVisualize
BU of 3vlm by Molmil
Crystal Structure Analysis of the Met244Ala Variant of KatG from Haloarcula marismortui
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sato, T, Ten-i, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal Structure and Kinetic Studies on Met244Ala Variant of KatG from HALOARCULA MARISMORTUI
To be Published
3QHP
DownloadVisualize
BU of 3qhp by Molmil
Crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from Helicobacter pylori
分子名称: Type 1 capsular polysaccharide biosynthesis protein J (CapJ)
著者Lee, S.J, Lee, B.I, Suh, S.W.
登録日2011-01-26
公開日2011-06-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from Helicobacter pylori
Proteins, 79, 2011
3VIO
DownloadVisualize
BU of 3vio by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
分子名称: 3-{4-[2-(beta-D-glucopyranosyloxy)ethyl]piperazin-1-yl}propane-1-sulfonic acid, Beta-glucosidase, CHLORIDE ION, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VBU
DownloadVisualize
BU of 3vbu by Molmil
Crystal structure of empty human Enterovirus 71 particle
分子名称: Genome Polyprotein, capsid protein VP0, capsid protein VP1, ...
著者Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
登録日2012-01-02
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
3VIL
DownloadVisualize
BU of 3vil by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with salicin
分子名称: 1,2-ETHANEDIOL, 2-(hydroxymethyl)phenol, 2-(hydroxymethyl)phenyl beta-D-glucopyranoside, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VJA
DownloadVisualize
BU of 3vja by Molmil
Crystal structure of the human squalene synthase
分子名称: NICKEL (II) ION, Squalene synthase
著者Liu, C.I, Jeng, W.Y, Chang, W.J, Wang, A.H.J.
登録日2011-10-14
公開日2012-04-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Binding modes of zaragozic acid A to human squalene synthase and staphylococcal dehydrosqualene synthase
J.Biol.Chem., 287, 2012
3Q9U
DownloadVisualize
BU of 3q9u by Molmil
In silico and in vitro co-evolution of a high affinity complementary protein-protein interface
分子名称: COENZYME A, CoA binding protein, consensus ankyrin repeat
著者Karanicolas, J, Corn, J.E, Chen, I, Joachimiak, L.A, Dym, O, Chung, S, Albeck, S, Unger, T, Hu, W, Liu, G, Delbecq, S, Montelione, G.T, Spiegel, C, Liu, D, Baker, D, Israel Structural Proteomics Center (ISPC)
登録日2011-01-10
公開日2011-04-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A de novo protein binding pair by computational design and directed evolution.
Mol.Cell, 42, 2011
3VOA
DownloadVisualize
BU of 3voa by Molmil
Staphylococcus aureus FtsZ 12-316 GDP-form
分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Yamane, J, Matsui, T, Mogi, N, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
4GCN
DownloadVisualize
BU of 4gcn by Molmil
N-terminal domain of stress-induced protein-1 (STI-1) from C.elegans
分子名称: Protein STI-1, TRIETHYLENE GLYCOL
著者Osipiuk, J, Bigelow, L, Gu, M, Van Oosten-Hawle, P, Morimoto, R.I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2012-07-30
公開日2012-08-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献N-terminal domain of stress-induced protein-1 (STI-1) from C.elegans
To be Published
3VBZ
DownloadVisualize
BU of 3vbz by Molmil
Crystal structure of Taipoxin beta subunit isoform 2
分子名称: Phospholipase A2 homolog, taipoxin beta chain
著者Cendron, L, Micetic, I, Polverino, P, Beltramini, M, Paoli, M.
登録日2012-01-03
公開日2012-07-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural analysis of trimeric phospholipase A(2) neurotoxin from the Australian taipan snake venom.
Febs J., 279, 2012
3QG7
DownloadVisualize
BU of 3qg7 by Molmil
Structural Basis for Ligand Recognition and Discrimination of a Quorum Quenching Antibody
分子名称: AP4-24H11 Antibody Heavy Chain, AP4-24H11 Antibody Light Chain, HEXAETHYLENE GLYCOL, ...
著者Kirchdoerfer, R.K, Kaufmann, G.F, Janda, J.D, Wilson, I.A.
登録日2011-01-24
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural Basis for Ligand Recognition and Discrimination of a Quorum-quenching Antibody.
J.Biol.Chem., 286, 2011
4FWX
DownloadVisualize
BU of 4fwx by Molmil
Aquoferric F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Gao, Y.-G, Stoner-Ma, D, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
登録日2012-07-02
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
3QKY
DownloadVisualize
BU of 3qky by Molmil
Crystal structure of Rhodothermus marinus BamD
分子名称: Outer membrane assembly lipoprotein YfiO
著者Sandoval, C.M, Baker, S.L, Jansen, K, Metzner, S.I, Sousa, M.C.
登録日2011-02-02
公開日2011-04-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of BamD: an essential component of the beta-Barrel assembly machinery of gram-negative bacteria.
J.Mol.Biol., 409, 2011
3QL3
DownloadVisualize
BU of 3ql3 by Molmil
Re-refined coordinates for PDB entry 1RX2
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
登録日2011-02-02
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis.
Science, 332, 2011
3VZR
DownloadVisualize
BU of 3vzr by Molmil
Crystal structure of T173S mutant of PhaB from Ralstonia eutropha
分子名称: Acetoacetyl-CoA reductase
著者Ikeda, K, Tanaka, Y, Tanaka, I, Yao, M.
登録日2012-10-15
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Directed evolution and structural analysis of NADPH-dependent Acetoacetyl Coenzyme A (Acetoacetyl-CoA) reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics
Appl.Environ.Microbiol., 79, 2013
4GBR
DownloadVisualize
BU of 4gbr by Molmil
N-Terminal T4 Lysozyme Fusion Facilitates Crystallization of a G Protein Coupled Receptor
分子名称: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, Beta-2 adrenergic receptor, Lysozyme
著者Zou, Y, Weis, W.I, Kobilka, B.K.
登録日2012-07-27
公開日2012-10-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.993 Å)
主引用文献N-terminal t4 lysozyme fusion facilitates crystallization of a g protein coupled receptor.
Plos One, 7, 2012

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon