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PDB: 17822 件

3WOJ
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Crystal structure of the DAP BII
分子名称: GLYCEROL, ZINC ION, dipeptidyl aminopeptidase BII
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
5FM3
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Crystal structure of hyper-phosphorylated RET kinase domain with (proximal) juxtamembrane segment
分子名称: 1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET
著者Plaza-Menacho, I, Barnouin, K, Barry, R, Borg, A, Orme, M, Mouilleron, S, Martinez-Torres, R.J, Meier, P, McDonald, N.Q.
登録日2015-10-30
公開日2016-12-28
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献RET Functions as a Dual-Specificity Kinase that Requires Allosteric Inputs from Juxtamembrane Elements.
Cell Rep, 17, 2016
5FQH
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The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, PHOSPHATE ION
著者Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
登録日2015-12-10
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
2NPU
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The solution structure of the rapamycin-binding domain of mTOR (FRB)
分子名称: FKBP12-rapamycin complex-associated protein
著者Veverka, V, Crabbe, T, Bird, I, Lennie, G, Muskett, F.W, Taylor, R.J, Carr, M.D.
登録日2006-10-30
公開日2007-09-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural characterization of the interaction of mTOR with phosphatidic acid and a novel class of inhibitor: compelling evidence for a central role of the FRB domain in small molecule-mediated regulation of mTOR.
Oncogene, 27, 2008
2N6L
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BU of 2n6l by Molmil
Solution NMR structure of Outer Membrane Protein G from Pseudomonas aeruginosa
分子名称: Outer membrane protein OprG
著者Kucharska, I, Seelheim, P, Edrington, T.C, Liang, B, Tamm, L.K.
登録日2015-08-25
公開日2015-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献OprG Harnesses the Dynamics of its Extracellular Loops to Transport Small Amino Acids across the Outer Membrane of Pseudomonas aeruginosa.
Structure, 23, 2015
2W2S
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Structure of the Lagos bat virus matrix protein
分子名称: MATRIX PROTEIN
著者Graham, S.C, Assenberg, R, Delmas, O, Verma, A, Gholami, A, Talbi, C, Owens, R.J, Stuart, D.I, Grimes, J.M, Bourhy, H.
登録日2008-11-03
公開日2009-01-13
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Rhabdovirus Matrix Protein Structures Reveal a Novel Mode of Self-Association.
Plos Pathog., 4, 2008
3ZEU
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Structure of a Salmonella typhimurium YgjD-YeaZ heterodimer bound to ATPgammaS
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Nichols, C.E, Lamb, H.K, Thompson, P, El Omari, K, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
登録日2012-12-07
公開日2013-03-20
最終更新日2017-03-29
実験手法X-RAY DIFFRACTION (1.653 Å)
主引用文献Crystal Structure of the Dimer of Two Essential Salmonella Typhimurium Proteins, Ygjd & Yeaz and Calorimetric Evidence for the Formation of a Ternary Ygjd-Yeaz-Yjee Complex.
Protein Sci., 22, 2013
2W6C
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ACHE IN COMPLEX WITH A BIS-(-)-NOR-MEPTAZINOL DERIVATIVE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(3R)-3-ethyl-1-{9-[(3S)-3-ethyl-3-(3-hydroxyphenyl)azepan-1-yl]nonyl}azepan-3-yl]phenol, ...
著者Paz, A, Xie, Q, Greenblatt, H.M, Fu, W, Tang, Y, Silman, I, Qiu, Z, Sussman, J.L.
登録日2008-12-18
公開日2009-04-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献The Crystal Structure of a Complex of Acetylcholinesterase with a Bis-(-)-Nor-Meptazinol Derivative Reveals Disruption of the Catalytic Triad.
J.Med.Chem., 52, 2009
1U5O
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Structure of the D23A mutant of the nuclear transport carrier NTF2
分子名称: Nuclear transport factor 2
著者Cushman, I, Bowman, B.R, Sowa, M.E, Lichtarge, O, Quiocho, F.A, Moore, M.S.
登録日2004-07-28
公開日2004-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Computational and biochemical identification of a nuclear pore complex binding site on the nuclear transport carrier NTF2.
J.Mol.Biol., 344, 2004
5FM7
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Double-heterohexameric rings of full-length Rvb1(ADP)Rvb2(ADP)
分子名称: ADENOSINE-5'-DIPHOSPHATE, RVB1, RVB2
著者Silva-Martin, N, Dauden, M.I, Glatt, S, Hoffmann, N.A, Mueller, C.W.
登録日2015-11-02
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献The Combination of X-Ray Crystallography and Cryo-Electron Microscopy Provides Insight Into the Overall Architecture of the Dodecameric Rvb1/Rvb2 Complex.
Plos One, 11, 2016
7W58
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Crystal structure of acyl-carrier protein synthase from Mycobacterium smegmatis
分子名称: 1,2-ETHANEDIOL, 4'-phosphopantetheinyl transferase, NICKEL (II) ION
著者Yadav, S, Bhatia, I, Biswal, B.K.
登録日2021-11-29
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Identification, structure determination and analysis of Mycobacterium smegmatis acyl-carrier protein synthase (AcpS) crystallized serendipitously.
Acta Crystallogr.,Sect.F, 78, 2022
5FLE
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High resolution NI,FE-CODH-320 mV with CN state
分子名称: CARBON MONOXIDE DEHYDROGENASE 2, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Ciaccafava, A, Tombolelli, D, Domnik, L, Fesseler, J, Jeoung, J.-H, Dobbek, H, Mroginski, M.A, Hildebrandt, P, Zebger, I.
登録日2015-10-26
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献When the inhibitor tells more than the substrate: the cyanide-bound state of a carbon monoxide dehydrogenase.
Chem Sci, 7, 2016
6F6T
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Phenylalanine ammonia-lyase (PAL) from Petroselinum crispum complexed with S-APPA
分子名称: (S)-(1-amino-2phenylallyl)phosphonic acid, Phenylalanine ammonia-lyase 1
著者Bata, Z, Leveles, I, Vertessy, G.B, Poppe, L.
登録日2017-12-06
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89995968 Å)
主引用文献Substrate Tunnel Engineering Aided by X-ray Crystallography and Functional Dynamics Swaps the Function of MIO-Enzymes
Acs Catalysis, 2021
1U0S
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Chemotaxis kinase CheA P2 domain in complex with response regulator CheY from the thermophile thermotoga maritima
分子名称: Chemotaxis protein cheA, Chemotaxis protein cheY
著者Park, S.Y, Beel, B.D, Simon, M.I, Bilwes, A.M, Crane, B.R.
登録日2004-07-14
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献In different organisms, the mode of interaction between two signaling proteins is not necessarily conserved
Proc.Natl.Acad.Sci.USA, 101, 2004
5F9U
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X-RAY STRUCTURE OF THE ADDUCT BETWEEN HEN EGG WHITE LYSOZYME AND CISPLATIN UPON 24 HOURS OF INCUBATION AT 20 DEGREES
分子名称: Cisplatin, GLYCEROL, Lysozyme C
著者Russo Krauss, I, Ferraro, G, Pica, A, Merlino, A.
登録日2015-12-10
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Effect of temperature on the interaction of cisplatin with the model protein hen egg white lysozyme.
J.Biol.Inorg.Chem., 21, 2016
2O3U
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
分子名称: 3-(AMINOCARBONYL)-1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYD ROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2- YL]PYRIDINIUM, ADP-ribosyl cyclase 1
著者Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
登録日2006-12-01
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
5FB2
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S. aureus MepR F27L Mutant bound to oligodeoxyribonucleotide
分子名称: DNA (5'-D(*CP*GP*TP*TP*A)-3'), GLYCEROL, MarR family regulatory protein
著者Birukou, I, Newman, C.E, Brennan, R.G.
登録日2015-12-13
公開日2016-12-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献S. aureus MepR F27L Mutant bound to oligodeoxyribonucleotide
To Be Published
5FBL
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PI4KB in complex with Rab11 and the MI356 Inhibitor
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
著者Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
登録日2015-12-14
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.372 Å)
主引用文献PI4KB in complex with Rab11 and the MI356 Inhibitor
To Be Published
5FBV
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PI4KB in complex with Rab11 and the MI364 Inhibitor
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta, Ras-related protein Rab-11A, ...
著者Chalupska, D, Mejdrova, I, Nencka, R, Boura, E.
登録日2015-12-14
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.285 Å)
主引用文献PI4KB in complex with Rab11 and the MI364 Inhibitor
To Be Published
2O3S
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
分子名称: ADP-ribosyl cyclase 1, CYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
著者Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
登録日2006-12-01
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
2O4D
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Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa
分子名称: Hypothetical protein PA0269
著者McGrath, T.E, Battaile, K, Kisselman, G, Romanov, V, Wu-Brown, J, Virag, C, Ng, I, Kimber, M, Edwards, A.M, Pai, E.F, Chirgadze, N.Y.
登録日2006-12-04
公開日2007-01-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa
To be Published
6AW7
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2.15A resolution structure of SAH bound catechol O-methyltransferase (COMT) from Nannospalax galili
分子名称: CALCIUM ION, Catechol O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Lovell, S, Mehzabeen, N, Battaile, K.P, Deng, Y, Hanzlik, R.P, Shams, I, Moskovitz, J.
登録日2017-09-05
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of the catechol-o-methyl transferase (COMT) enzyme of the subterranean mole rat (Spalax) and the effect of L136M substitution
To be published
5FCP
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X-RAY STRUCTURE OF THE ADDUCT BETWEEN HEN EGG WHITE LYSOZYME AND CISPLATIN AT LONG INCUBATION TIMES
分子名称: CHLORIDE ION, Cisplatin, GLYCEROL, ...
著者Russo Krauss, I, Ferraro, G, Pica, A, Merlino, A.
登録日2015-12-15
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Effect of temperature on the interaction of cisplatin with the model protein hen egg white lysozyme.
J.Biol.Inorg.Chem., 21, 2016
1U3N
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A SOD-like protein from B. subtilis, unstructured in solution, becomes ordered in the crystal: implications for function and for fibrillogenesis
分子名称: Hypothetical superoxide dismutase-like protein yojM
著者Banci, L, Bertini, I, Calderone, V, Cramaro, F, Del Conte, R, Fantoni, A, Mangani, S, Quattrone, A, Viezzoli, M.S.
登録日2004-07-22
公開日2005-05-03
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献A prokaryotic superoxide dismutase paralog lacking two Cu ligands: from largely unstructured in solution to ordered in the crystal.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5FPE
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Structure of heat shock-related 70kDA protein 2 with small-molecule ligand 1H-1,2,4-triazol-3-amine (AT485) in an alternate binding site.
分子名称: 3-AMINO-1,2,4-TRIAZOLE, HEAT SHOCK-RELATED 70KDA PROTEIN 2
著者Jhoti, H, Ludlow, R.F, Patel, S, Saini, H.K, Tickle, I.J, Verdonk, M.
登録日2015-11-28
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015

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