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PDB: 89 results

1CQ6
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ASPARTATE AMINOTRANSFERASE COMPLEX WITH C4-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO- BUTYRIC ACID, ASPARTATE AMINOTRANSFERASE
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
1CQ7
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ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C5-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-PENTANOIC ACID, ASPARTATE AMINOTRANSFERASE
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
1I1K
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CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE.
Descriptor: BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okada, K, Hirotsu, K, Hayashi, H, Kagamiyama, H.
Deposit date:2001-02-02
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of Escherichia coli branched-chain amino acid aminotransferase and its complexes with 4-methylvalerate and 2-methylleucine: induced fit and substrate recognition of the enzyme.
Biochemistry, 40, 2001
1I1L
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CRYSTAL STRUCTURE OF ESCHELICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE.
Descriptor: 2-METHYLLEUCINE, BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okada, K, Hirotsu, K, Hayashi, H, Kagamiyama, H.
Deposit date:2001-02-02
Release date:2001-07-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Escherichia coli branched-chain amino acid aminotransferase and its complexes with 4-methylvalerate and 2-methylleucine: induced fit and substrate recognition of the enzyme.
Biochemistry, 40, 2001
1I1M
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE.
Descriptor: 4-METHYL VALERIC ACID, BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okada, K, Hirotsu, K, Hayashi, H, Kagamiyama, H.
Deposit date:2001-02-02
Release date:2001-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Escherichia coli branched-chain amino acid aminotransferase and its complexes with 4-methylvalerate and 2-methylleucine: induced fit and substrate recognition of the enzyme.
Biochemistry, 40, 2001
2DKJ
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Crystal Structure of T.th.HB8 Serine Hydroxymethyltransferase
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, serine hydroxymethyltransferase
Authors:Kai, K, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-11
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of T.th.HB8 Serine Hydroxymethyltransferase
To be Published
1IS2
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Crystal Structure of Peroxisomal Acyl-CoA Oxidase-II from Rat Liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, acyl-CoA oxidase
Authors:Nakajima, Y, Miyahara, I, Hirotsu, K.
Deposit date:2001-11-07
Release date:2002-04-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of the flavoenzyme acyl-CoA oxidase-II from rat liver, the peroxisomal counterpart of mitochondrial acyl-CoA dehydrogenase.
J.Biochem., 131, 2002
1B5P
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THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE DOUBLE MUTANT 1
Descriptor: PHOSPHATE ION, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-01-07
Release date:2003-09-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001
1JMX
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crystal structure of a quinohemoprotein amine dehydrogenase from pseudomonas putida
Descriptor: Amine Dehydrogenase, HEME C, NICKEL (II) ION
Authors:Satoh, A, Miyahara, I, Hirotsu, K.
Deposit date:2001-07-20
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of quinohemoprotein amine dehydrogenase from Pseudomonas putida. Identification of a novel quinone cofactor encaged by multiple thioether cross-bridges.
J.Biol.Chem., 277, 2002
1JMZ
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crystal structure of a quinohemoprotein amine dehydrogenase from pseudomonas putida with inhibitor
Descriptor: Amine Dehydrogenase, HEME C, NICKEL (II) ION, ...
Authors:Satoh, A, Miyahara, I, Hirotsu, K.
Deposit date:2001-07-20
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of quinohemoprotein amine dehydrogenase from Pseudomonas putida. Identification of a novel quinone cofactor encaged by multiple thioether cross-bridges.
J.Biol.Chem., 277, 2002
1AY4
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AROMATIC AMINO ACID AMINOTRANSFERASE WITHOUT SUBSTRATE
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1B5O
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THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE SINGLE MUTANT 1
Descriptor: PHOSPHATE ION, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-01-07
Release date:2003-09-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001
1AY5
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AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH MALEATE
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1C9C
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ASPARTATE AMINOTRANSFERASE COMPLEXED WITH C3-PYRIDOXAL-5'-PHOSPHATE
Descriptor: ALANYL-PYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-02
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
1AY8
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AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH 3-PHENYLPROPIONATE
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1CQ8
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ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C6-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID, ASPARTATE AMINOTRANSFERASE (2.6.1.1)
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
2YRR
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hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
Descriptor: Aminotransferase, class V, PYRIDOXAL-5'-PHOSPHATE
Authors:Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
To be Published
2YRI
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Crystal structure of alanine-pyruvate aminotransferase with 2-methylserine
Descriptor: (S,E)-3-HYDROXY-2-((3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL)METHYLENEAMINO)-2-METHYLPROPANOIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase, ...
Authors:Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:hypothetical alanine aminotransferase (TTHA0173) from Thermus thermophilus HB8
To be Published
3A9Z
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Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A9X
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Crystal structure of rat selenocysteine lyase
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-08
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A9Y
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Crystal structure of rat selenocysteine lyase in complex with L-cysteine
Descriptor: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1SPA
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BU of 1spa by Molmil
ROLE OF ASP222 IN THE CATALYTIC MECHANISM OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE: THE AMINO ACID RESIDUE WHICH ENHANCES THE FUNCTION OF THE ENZYME-BOUND COENZYME PYRIDOXAL 5'-PHOSPHATE
Descriptor: ASPARTATE AMINOTRANSFERASE, N-METHYL-4-DEOXY-4-AMINO-PYRIDOXAL-5-PHOSPHATE
Authors:Hinoue, Y, Yano, T, Metzler, D.E, Miyahara, I, Hirotsu, K, Kagamiyama, H.
Deposit date:1993-01-26
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.
Biochemistry, 31, 1992
1J21
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with ATP and citrulline
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Argininosuccinate Synthetase, CITRULLINE
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1J20
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with product
Descriptor: ADENOSINE MONOPHOSPHATE, ARGININOSUCCINATE, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1IX8
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Aspartate Aminotransferase Active Site Mutant V39F/N194A
Descriptor: Aspartate Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Hayashi, H, Mizuguchi, H, Miyahara, I, Nakajima, Y, Hirotsu, K, Kagamiyama, H.
Deposit date:2002-06-14
Release date:2002-07-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational change in aspartate aminotransferase on substrate binding induces strain in the catalytic group and enhances catalysis
J.BIOL.CHEM., 278, 2003

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