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PDB: 134 results

1GPR
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REFINED CRYSTAL STRUCTURE OF IIA DOMAIN OF THE GLUCOSE PERMEASE OF BACILLUS SUBTILIS AT 1.9 ANGSTROMS RESOLUTION
Descriptor: GLUCOSE PERMEASE
Authors:Liao, D.-I, Herzberg, O.
Deposit date:1991-09-25
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An atomic model for protein-protein phosphoryl group transfer.
J.Biol.Chem., 267, 1992
3ZNB
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METALLO-BETA-LACTAMASE (ZN, HG-BOUND FORM)
Descriptor: MERCURY (II) ION, METALLO-BETA-LACTAMASE, SODIUM ION, ...
Authors:Concha, N.O, Herzberg, O.
Deposit date:1997-10-15
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 6, 1997
8SOT
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BU of 8sot by Molmil
Structure of the PPIase domain of borrelial BB0108
Descriptor: Basic membrane protein, GLYCEROL
Authors:Shakya, A.K, Herzberg, O.
Deposit date:2023-04-30
Release date:2023-10-11
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
1BLH
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BU of 1blh by Molmil
STRUCTURE OF A PHOSPHONATE-INHIBITED BETA-LACTAMASE. AN ANALOG OF THE TETRAHEDRAL TRANSITION STATE(SLASH)INTERMEDIATE OF BETA-LACTAM HYDROLYSIS
Descriptor: BETA-LACTAMASE, [[N-(BENZYLOXYCARBONYL)AMINO]METHYL]PHOSPHATE
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1993-09-30
Release date:1994-08-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a phosphonate-inhibited beta-lactamase. An analog of the tetrahedral transition state/intermediate of beta-lactam hydrolysis.
J.Mol.Biol., 234, 1993
7LYZ
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PROTEIN MODEL BUILDING BY THE USE OF A CONSTRAINED-RESTRAINED LEAST-SQUARES PROCEDURE
Descriptor: HEN EGG WHITE LYSOZYME
Authors:Moult, J, Yonath, A, Sussman, J, Herzberg, O, Podjarny, A, Traub, W.
Deposit date:1977-05-06
Release date:1977-06-20
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Protein Model Building by the Use of a Constrained-Restrained Least-Squares Procedure
J.Appl.Crystallogr., 16, 1983
4JZ9
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Carbamate kinase from Giardia lamblia bound to citric acid
Descriptor: CITRIC ACID, Carbamate kinase
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
4JZ8
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Carbamate kinase from Giardia lamblia bound to citric acid
Descriptor: CITRIC ACID, Carbamate kinase
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
4JZ7
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Carbamate kinase from Giardia lamblia bound to AMP-PNP
Descriptor: Carbamate kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
1BLC
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INHIBITION OF BETA-LACTAMASE BY CLAVULANATE: TRAPPED INTERMEDIATES IN CRYOCRYSTALLOGRAPHIC STUDIES
Descriptor: BETA-LACTAMASE, N-(1-CARBOXY-2-HYDROXY-4-OXO-BUTYL)-N-(3-OXO-CISPROPENYL)AMINE, N-(2-HYDROXY-4-OXO-BUTYL)-N-(3-OXO-TRANSPROPENYL)AMINE, ...
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1993-09-27
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibition of beta-lactamase by clavulanate. Trapped intermediates in cryocrystallographic studies.
J.Mol.Biol., 224, 1992
2DIK
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BU of 2dik by Molmil
R337A MUTANT OF PYRUVATE PHOSPHATE DIKINASE
Descriptor: PROTEIN (PYRUVATE PHOSPHATE DIKINASE), SULFATE ION
Authors:Huang, K, Herzberg, O.
Deposit date:1998-09-03
Release date:1999-09-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Location of the phosphate binding site within Clostridium symbiosum pyruvate phosphate dikinase.
Biochemistry, 37, 1998
3BJK
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BU of 3bjk by Molmil
Crystal structure of HI0827, a hexameric broad specificity acyl-coenzyme A thioesterase: The Asp44Ala mutant enzyme
Descriptor: 1,2-ETHANEDIOL, Acyl-CoA thioester hydrolase HI0827, CITRIC ACID
Authors:Willis, M.A, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:2007-12-04
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of YciA from Haemophilus influenzae (HI0827), a Hexameric Broad Specificity Acyl-Coenzyme A Thioesterase.
Biochemistry, 47, 2008
8P33
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BB0238 from Borrelia burgdorferi
Descriptor: BB0238
Authors:Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U.
Deposit date:2023-05-16
Release date:2023-10-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
8P32
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BU of 8p32 by Molmil
BB0238 from Borrelia burgdorferi, Se-Met data for Leu240Met mutant
Descriptor: BB0238
Authors:Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U.
Deposit date:2023-05-16
Release date:2023-10-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A unique borrelial protein facilitates microbial immune evasion.
Mbio, 14, 2023
1OME
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BU of 1ome by Molmil
CRYSTAL STRUCTURE OF THE OMEGA LOOP DELETION MUTANT (RESIDUES 163-178 DELETED) OF BETA-LACTAMASE FROM STAPHYLOCOCCUS AUREUS PC1
Descriptor: BETA-LACTAMASE, CHLORIDE ION
Authors:Banerjee, S, Pieper, U, Herzberg, O.
Deposit date:1998-02-09
Release date:1998-05-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase.
Biochemistry, 37, 1998
1DJC
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BU of 1djc by Molmil
STRUCTURE OF BETA-LACTAMASE PRECURSOR, S70A MUTANT, AT 120K
Descriptor: BETA-LACTAMASE, SULFATE ION
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1996-08-13
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and kinetics of the beta-lactamase mutants S70A and K73H from Staphylococcus aureus PC1.
Biochemistry, 35, 1996
4OLC
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Carbamate kinase from Giardia lamblia thiocarbamoylated by disulfiram on Cys242
Descriptor: CITRIC ACID, Carbamate kinase, DIETHYLCARBAMODITHIOIC ACID
Authors:Lim, K, Herzberg, O.
Deposit date:2014-01-23
Release date:2014-02-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Inactivation of Giardia lamblia Carbamate Kinase by Disulfiram.
J.Biol.Chem., 289, 2014
1GGO
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BU of 1ggo by Molmil
T453A MUTANT OF PYRUVATE, PHOSPHATE DIKINASE
Descriptor: PROTEIN (PYRUVATE, PHOSPHATE DIKINASE), SULFATE ION
Authors:Li, Z, Herzberg, O.
Deposit date:2000-08-29
Release date:2001-01-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of domain-domain docking sites within Clostridium symbiosum pyruvate phosphate dikinase by amino acid replacement.
J.Biol.Chem., 275, 2000
2ZNB
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BU of 2znb by Molmil
METALLO-BETA-LACTAMASE (CADMIUM-BOUND FORM)
Descriptor: CADMIUM ION, METALLO-BETA-LACTAMASE, SODIUM ION
Authors:Concha, N.O, Herzberg, O.
Deposit date:1997-10-14
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 6, 1997
2OUT
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BU of 2out by Molmil
Solution Structure of HI1506, a Novel Two Domain Protein from Haemophilus influenzae
Descriptor: Mu-like prophage FluMu protein gp35, Protein HI1507 in Mu-like prophage FluMu region
Authors:Sari, N, He, Y, Doseeva, V, Surabian, K, Schwarz, F, Herzberg, O, Orban, J, Structure 2 Function Project (S2F)
Deposit date:2007-02-12
Release date:2007-05-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of HI1506, a novel two-domain protein from Haemophilus influenzae.
Protein Sci., 16, 2007
2PE4
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BU of 2pe4 by Molmil
Structure of Human Hyaluronidase 1, a Hyaluronan Hydrolyzing Enzyme Involved in Tumor Growth and Angiogenesis
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, GLYCEROL, ...
Authors:Chao, K.L, Herzberg, O.
Deposit date:2007-04-02
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Human Hyaluronidase-1, a Hyaluronan Hydrolyzing Enzyme Involved in Tumor Growth and Angiogenesis
Biochemistry, 46, 2007
1DJB
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STRUCTURE OF BETA-LACTAMASE PRECURSOR, S70A MUTANT, AT 298K
Descriptor: BETA-LACTAMASE
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1996-08-13
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and kinetics of the beta-lactamase mutants S70A and K73H from Staphylococcus aureus PC1.
Biochemistry, 35, 1996
1DJA
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STRUCTURE OF BETA-LACTAMASE PRECURSOR, K73H MUTANT, AT 298K
Descriptor: BETA-LACTAMASE
Authors:Chen, C.C.H, Herzberg, O.
Deposit date:1996-08-13
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and kinetics of the beta-lactamase mutants S70A and K73H from Staphylococcus aureus PC1.
Biochemistry, 35, 1996
1PCH
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STRUCTURAL EVIDENCE FOR THE EVOLUTIONARY DIVERGENCE OF MYCOPLASMA FROM GRAM-POSITIVE BACTERIA: THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN
Descriptor: PHOSPHOCARRIER PROTEIN, SULFATE ION
Authors:Pieper, U, Herzberg, O.
Deposit date:1995-07-11
Release date:1995-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural evidence for the evolutionary divergence of mycoplasma from gram-positive bacteria: the histidine-containing phosphocarrier protein.
Structure, 3, 1995
1PIO
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AN ENGINEERED STAPHYLOCOCCUS AUREUS PC1 BETA-LACTAMASE THAT HYDROLYSES THIRD GENERATION CEPHALOSPORINS
Descriptor: BETA-LACTAMASE
Authors:Zawadzke, L.E, Herzberg, O.
Deposit date:1995-10-11
Release date:1996-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An engineered Staphylococcus aureus PC1 beta-lactamase that hydrolyses third-generation cephalosporins.
Protein Eng., 8, 1995
4FWW
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Crystal structure of the Sema-PSI extracellular domains of human RON receptor tyrosine kinase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Chao, K.L, Herzberg, O.
Deposit date:2012-07-02
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Sema-PSI Extracellular Domain of Human RON Receptor Tyrosine Kinase.
Plos One, 7, 2012

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