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PDB: 110 results

1GTK
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BU of 1gtk by Molmil
Time-resolved and static-ensemble structural chemistry of hydroxymethylbilane synthase
Descriptor: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, PORPHOBILINOGEN DEAMINASE
Authors:Helliwell, J.R, Nieh, Y.P, Raftery, J, Cassetta, A, Habash, J, Carr, P.D, Ursby, T, Wulff, M, Thompson, A.W, Niemann, A.C, Haedener, A.
Deposit date:2002-01-16
Release date:2003-01-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Time-Resolved and Static-Ensemble Structural Chemistry of Hydroxymethylbilane Synthase
Faraday Discuss., 122, 2003
5M1Y
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BU of 5m1y by Molmil
The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, IODIDE ION, ...
Authors:Helliwell, J.R.
Deposit date:2016-10-11
Release date:2016-10-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this
Zenodo, 2016
6GJT
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BU of 6gjt by Molmil
Chlamydia protein Pgp3 studied at high resolution in a new crystal form
Descriptor: BROMIDE ION, POTASSIUM ION, Virulence plasmid protein pGP3-D
Authors:Helliwell, J.R.
Deposit date:2018-05-17
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Chlamydia protein Pgp3 studied at high resolution in a new crystal form.
IUCrJ, 5, 2018
2XTH
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BU of 2xth by Molmil
K2PtBr6 binding to lysozyme
Descriptor: HEXABROMOPLATINATE(IV), LYSOZYME C
Authors:Helliwell, J.R, Bell, A.M.T, Bryant, P, Fisher, S, Habash, J, Helliwell, M, Margiolaki, I, Kaenket, S, Watier, Y, Wright, J, Yalamanchili, S.K.
Deposit date:2010-10-07
Release date:2010-12-08
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Time-Dependent Analysis of K2Ptbr6 Binding to Lysozyme Studied by Protein Powder and Single Crystal X-Ray Analysis
Z.Kristallogr., 225, 2010
4R6C
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BU of 4r6c by Molmil
X-ray diffraction in temporally and spatially resolved biomolecular science: the X-ray crystal structure of hen egg white lysozyme cocrystallized with Ta6Br12 and then a crystal soaked in K2PtBr6
Descriptor: BROMIDE ION, CHLORIDE ION, HEXABROMOPLATINATE(IV), ...
Authors:Helliwell, J.R.
Deposit date:2014-08-24
Release date:2015-02-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray diffraction in temporally and spatially resolved biomolecular science.
Faraday Discuss, 177, 2015
5L3H
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BU of 5l3h by Molmil
Re-refinement of 4dd4; cisplatin coordination chemistry determination at hen egg white lysozyme His15 with standard uncertainties
Descriptor: AMMONIA, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Helliwell, J.R, Tanley, S.W.M.
Deposit date:2016-05-06
Release date:2016-06-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cisplatin coordination chemistry determination at hen egg white lysozyme His15 with ligand distances and angles, and their standard uncertainties, and also reporting a split occupancy effect
ArXiv, 2016
5L3I
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BU of 5l3i by Molmil
Re-refinement of 4dd6; cisplatin coordination chemistry determination at hen egg white lysozyme His15
Descriptor: AMMONIA, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Helliwell, J.R.
Deposit date:2016-05-06
Release date:2016-06-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cisplatin coordination chemistry determination at hen egg white lysozyme His15 with ligand distances and angles, and their standard uncertainties, and also reporting a split occupancy effect
ArXiv, 2016
5HQ1
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BU of 5hq1 by Molmil
Comment on S. W. M. Tanley and J. R. Helliwell Structural dynamics of cisplatin binding to histidine in a protein Struct. Dyn. 1, 034701 (2014) regarding the refinement of 4mwk, 4mwm, 4mwn and 4oxe and the method we have adopted.
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Helliwell, J.R.
Deposit date:2016-01-21
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1 Å)
Cite:Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Struct Dyn, 3, 2016
1YPN
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BU of 1ypn by Molmil
REDUCED FORM HYDROXYMETHYLBILANE SYNTHASE (K59Q MUTANT) CRYSTAL STRUCTURE AFTER 2 HOURS IN A FLOW CELL DETERMINED BY TIME-RESOLVED LAUE DIFFRACTION
Descriptor: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, HYDROXYMETHYLBILANE SYNTHASE
Authors:Helliwell, J.R, Nieh, Y.P, Raftery, J, Cassetta, A, Habash, J, Carr, P.D, Ursby, T, Wulff, M, Thompson, A.W, Niemann, A.C, Haedener, A.
Deposit date:1998-06-26
Release date:1999-03-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Time-Resolved Structures of Hydroxymethylbilane Synthase (Lys59Gln Mutant) as It Isloaded with Substrate in the Crystal Determined by Laue Diffraction
J.Chem.Soc.,Faraday Trans., 94, 1998
7NJZ
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BU of 7njz by Molmil
X-ray crystallography study of RoAb13 which binds to PIYDIN, a part of the CCR5 N terminal domain
Descriptor: Antibody RoAb13 Heavy Chain, Antibody RoAb13 Light Chain, Region from C-C chemokine receptor type 5 N-terminal domain
Authors:Helliwell, J.R, Chayen, N, Saridakis, E, Govada, L.
Deposit date:2021-02-17
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray crystallographic studies of RoAb13 bound to PIYDIN, a part of the N-terminal domain of C-C chemokine receptor 5.
Iucrj, 8, 2021
5HMV
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BU of 5hmv by Molmil
Re refinement of 4mwk.
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Helliwell, J.R.
Deposit date:2016-01-17
Release date:2016-05-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Struct Dyn, 3, 2016
5HMJ
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BU of 5hmj by Molmil
Re-refinement of 4xan: hen lysozyme with carboplatin in sodium bromide solution
Descriptor: ACETATE ION, BROMIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Helliwell, J.R.
Deposit date:2016-01-16
Release date:2016-03-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.299901 Å)
Cite:Re-refinement of 4xan: hen egg-white lysozyme with carboplatin in sodium bromide solution.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5LXW
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BU of 5lxw by Molmil
Atomic resolution X-ray crystal structure of cisplatin bound to hen egg white lysozyme stored for 5 years on the shelf
Descriptor: AMMONIA, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Helliwell, J.R.
Deposit date:2016-09-22
Release date:2016-10-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic resolution X-ray crystal structure of cisplatin bound to hen egg white lysozyme stored for 5 years 'on the shelf'
Zenodo, 2016
5HLL
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BU of 5hll by Molmil
Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.
Descriptor: AMMONIA, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Helliwell, J.R.
Deposit date:2016-01-15
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5I5Q
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BU of 5i5q by Molmil
Re refinement of 4mwn.
Descriptor: DIMETHYL SULFOXIDE, Lysozyme C, NITRATE ION, ...
Authors:Helliwell, J.R.
Deposit date:2016-02-15
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Struct Dyn, 3, 2016
1AH5
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BU of 1ah5 by Molmil
REDUCED FORM SELENOMETHIONINE-LABELLED HYDROXYMETHYLBILANE SYNTHASE DETERMINED BY MAD
Descriptor: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, HYDROXYMETHYLBILANE SYNTHASE
Authors:Helliwell, J.R, Nieh, Y.P, Harrop, S.J, Cassetta, A.
Deposit date:1997-04-13
Release date:1997-10-15
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Determination of the structure of seleno-methionine-labelled hydroxymethylbilane synthase in its active form by multi-wavelength anomalous dispersion.
Acta Crystallogr.,Sect.D, 55, 1999
4GCE
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BU of 4gce by Molmil
Room temperature X-ray diffraction study of a 6-fold molar excess of a cisplatin/carboplatin mixture binding to HEWL, Dataset 3
Descriptor: Cisplatin, DIMETHYL SULFOXIDE, Lysozyme C
Authors:Helliwell, J.R, Tanley, S.W.M.
Deposit date:2012-07-30
Release date:2013-01-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure analysis of the relative binding of cisplatin and carboplatin in a mixture with histidine in a protein studied at 100 and 300 K with repeated X-ray irradiation.
Acta Crystallogr.,Sect.D, 69, 2013
4GCB
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BU of 4gcb by Molmil
100K X-ray diffraction study of a 6-fold molar excess of a cisplatin/carboplatin mixture binding to HEWL
Descriptor: CHLORIDE ION, Cisplatin, DIMETHYL SULFOXIDE, ...
Authors:Helliwell, J.R, Tanley, S.W.M.
Deposit date:2012-07-30
Release date:2013-01-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure analysis of the relative binding of cisplatin and carboplatin in a mixture with histidine in a protein studied at 100 and 300 K with repeated X-ray irradiation.
Acta Crystallogr.,Sect.D, 69, 2013
4GCF
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BU of 4gcf by Molmil
Room temperature X-ray diffraction study of a 6-fold molar excess of a cisplatin/carboplatin mixture binding to HEWL, Dataset 4
Descriptor: DIMETHYL SULFOXIDE, Lysozyme C, PLATINUM (II) ION
Authors:Helliwell, J.R, Tanley, S.W.M.
Deposit date:2012-07-30
Release date:2013-01-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The crystal structure analysis of the relative binding of cisplatin and carboplatin in a mixture with histidine in a protein studied at 100 and 300 K with repeated X-ray irradiation.
Acta Crystallogr.,Sect.D, 69, 2013
4GCC
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BU of 4gcc by Molmil
Room temperature X-ray diffraction study of a 6-fold molar excess of a cisplatin/carboplatin mixture binding to HEWL, Dataset 1
Descriptor: Cisplatin, DIMETHYL SULFOXIDE, Lysozyme C
Authors:Helliwell, J.R, Tanley, S.W.M.
Deposit date:2012-07-30
Release date:2013-01-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure analysis of the relative binding of cisplatin and carboplatin in a mixture with histidine in a protein studied at 100 and 300 K with repeated X-ray irradiation.
Acta Crystallogr.,Sect.D, 69, 2013
4GCD
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BU of 4gcd by Molmil
Room temperature X-ray diffraction study of a 6-fold molar excess of a cisplatin/carboplatin mixture binding to HEWL, Dataset 2
Descriptor: Cisplatin, DIMETHYL SULFOXIDE, Lysozyme C
Authors:Helliwell, J.R, Tanley, S.W.M.
Deposit date:2012-07-30
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure analysis of the relative binding of cisplatin and carboplatin in a mixture with histidine in a protein studied at 100 and 300 K with repeated X-ray irradiation.
Acta Crystallogr.,Sect.D, 69, 2013
1QNY
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BU of 1qny by Molmil
X-ray refinement of D2O soaked crystal of concanavalin A
Descriptor: CALCIUM ION, CONCANAVALIN A, MANGANESE (II) ION
Authors:Habash, J, Raftery, J, Nuttall, R, Price, H.J, Lehmann, M.S, Wilkinson, C, Kalb(Gilboa), A.J, Helliwell, J.R.
Deposit date:1999-10-26
Release date:2000-04-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct Determination of the Positions of Deuterium Atoms of Bound Water in Concanavalin a by Neutron Laue Crystallography
Acta Crystallogr.,Sect.D, 56, 2000
9GHX
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BU of 9ghx by Molmil
Lysozyme covalently bound to fac-[Re(CO)3-imidazole] complex, incubated for 112 weeks. Data collection done at mammalian body temperature.
Descriptor: CHLORIDE ION, IMIDAZOLE, Lysozyme C, ...
Authors:Jacobs, F.J.F, Brink, A, Helliwell, J.R.
Deposit date:2024-08-16
Release date:2024-10-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Body temperature protein X-ray crystallography at 37 °C: a rhenium protein complex seeking a physiological condition structure.
Chem.Commun.(Camb.), 2024
4LT3
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BU of 4lt3 by Molmil
HEWL co-crystallized with Carboplatin in non-NaCl conditions: crystal 2 processed using the XDS software package
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Tanley, S.W.M, Diederichs, K, Kroon-Batenburg, L.M.J, Schreurs, A.M.M, Helliwell, J.R.
Deposit date:2013-07-23
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Carboplatin binding to histidine.
Acta Crystallogr.,Sect.F, 70, 2014
242D
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BU of 242d by Molmil
MAD PHASING STRATEGIES EXPLORED WITH A BROMINATED OLIGONUCLEOTIDE CRYSTAL AT 1.65 A RESOLUTION.
Descriptor: DNA (5'-D(*CP*GP*CP*GP*(CBR)P*G)-3')
Authors:Peterson, M.R, Harrop, S.J, McSweeney, S.M, Leonard, G.A, Thompson, A.W, Hunter, W.N, Helliwell, J.R.
Deposit date:1996-06-20
Release date:1996-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:MAD Phasing Strategies Explored with a Brominated Oligonucleotide Crystal at 1.65A Resolution.
J.Synchrotron Radiat., 3, 1996

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