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PDB: 57 件

5OJ9
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Structure of Mb NMH
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Hayashi, T, Pott, M, Mori, T, Mittl, P, Green, A, Hivert, D.
登録日2017-07-21
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.483 Å)
主引用文献A Noncanonical Proximal Heme Ligand Affords an Efficient Peroxidase in a Globin Fold.
J. Am. Chem. Soc., 140, 2018
4DVY
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BU of 4dvy by Molmil
Crystal structure of the Helicobacter pylori CagA oncoprotein
分子名称: Cytotoxicity-associated immunodominant antigen
著者Hayashi, T, Senda, M, Morohashi, H, Higashi, H, Horio, M, Kashiba, Y, Nagase, L, Sasaya, D, Shimizu, T, Venugopalan, N, Kumeta, H, Noda, N, Inagaki, F, Senda, T, Hatakeyama, M.
登録日2012-02-23
公開日2012-07-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Tertiary Structure-Function Analysis Reveals the Pathogenic Signaling Potentiation Mechanism of Helicobacter pylori Oncogenic Effector CagA
Cell Host Microbe, 12, 2012
5OJA
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Structure of MbQ
分子名称: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Hayashi, T, Pott, M, Mori, T, Mittl, P, Green, A, Hivert, D.
登録日2017-07-21
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.347 Å)
主引用文献A Noncanonical Proximal Heme Ligand Affords an Efficient Peroxidase in a Globin Fold.
J. Am. Chem. Soc., 140, 2018
5OJB
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BU of 5ojb by Molmil
Structure of MbQ NMH
分子名称: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Hayashi, T, Pott, M, Mori, T, Mittl, P, Green, A, Hivert, D.
登録日2017-07-21
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.543 Å)
主引用文献A Noncanonical Proximal Heme Ligand Affords an Efficient Peroxidase in a Globin Fold.
J. Am. Chem. Soc., 140, 2018
5OJC
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Structure of MbQ2.1 NMH
分子名称: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Hayashi, T, Pott, M, Mori, T, Mittl, P, Green, A, Hivert, D.
登録日2017-07-21
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献A Noncanonical Proximal Heme Ligand Affords an Efficient Peroxidase in a Globin Fold.
J. Am. Chem. Soc., 140, 2018
5L86
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engineered ascorbate peroxidise
分子名称: Ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Hayashi, T, Mittl, P, Hilvert, D.
登録日2016-06-07
公開日2017-03-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Chemically Programmed Proximal Ligand Enhances the Catalytic Properties of a Heme Enzyme.
J. Am. Chem. Soc., 138, 2016
2RU7
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Refined structure of RNA aptamer in complex with the partial binding peptide of prion protein
分子名称: P16 peptide from Major prion protein, RNA_(5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3')
著者Hayashi, T, Oshima, H, Mashima, T, Nagata, T, Katahira, M, Kinoshita, M.
登録日2013-12-24
公開日2014-05-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Binding of an RNA aptamer and a partial peptide of a prion protein: crucial importance of water entropy in molecular recognition.
Nucleic Acids Res., 42, 2014
4DVZ
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Crystal structure of the Helicobacter pylori CagA oncoprotein
分子名称: Cytotoxicity-associated immunodominant antigen
著者Hayashi, T, Senda, M, Morohashi, H, Higashi, H, Horio, M, Kashiba, Y, Nagase, L, Sasaya, D, Shimizu, T, Venugopalan, N, Kumeta, H, Noda, N, Inagaki, F, Senda, T, Hatakeyama, M.
登録日2012-02-23
公開日2012-07-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Tertiary structure-function analysis reveals the pathogenic signaling potentiation mechanism of Helicobacter pylori oncogenic effector CagA
Cell Host Microbe, 12, 2012
2Z97
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Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 7-Methyl-7-depropionated Hemin
分子名称: 7-METHYL-7-DEPROPIONATEHEMIN, CAMPHOR, Cytochrome P450-cam, ...
著者Hayashi, T, Harada, K, Sakurai, K, Hirota, S, Shimada, H.
登録日2007-09-18
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A role of the heme-7-propionate side chain in cytochrome P450cam as a gate for regulating the access of water molecules to the substrate-binding site
J.Am.Chem.Soc., 131, 2009
2D6Y
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Crystal Structure of transcriptional factor SCO4008 from Streptomyces coelicolor A3(2)
分子名称: L(+)-TARTARIC ACID, putative tetR family regulatory protein
著者Hayashi, T, Tanaka, Y, Sakai, N, Yao, M, Tamura, T, Tanaka, I.
登録日2005-11-15
公開日2006-10-31
最終更新日2013-09-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献SCO4008, a Putative TetR Transcriptional Repressor from Streptomyces coelicolor A3(2), Regulates Transcription of sco4007 by Multidrug Recognition.
J.Mol.Biol., 425, 2013
2D6C
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Crystal structure of myoglobin reconstituted with iron porphycene
分子名称: IMIDAZOLE, Myoglobin, PORPHYCENE CONTAINING FE
著者Hayashi, T, Murata, D, Makino, M, Sugimoto, H, Matsuo, T, Sato, H, Shiro, Y, Hisaeda, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-11-11
公開日2006-10-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystal structure and peroxidase activity of myoglobin reconstituted with iron porphycene
Inorg.Chem., 45, 2006
2DG7
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Crystal structure of the putative transcriptional regulator SCO0337 from Streptomyces coelicolor A3(2)
分子名称: putative transcriptional regulator
著者Hayashi, T, Tanaka, Y, Sakai, N, Yao, M, Tamura, T, Tanaka, I.
登録日2006-03-08
公開日2007-03-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the putative transcriptional regulator SCO0337 from Streptomyces coelicolor A3(2)
To be Published
2DG8
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Crystal structure of the putative trasncriptional regulator SCO7518 from Streptomyces coelicolor A3(2)
分子名称: putative tetR-family transcriptional regulatory protein
著者Hayashi, T, Watanabe, N, Sakai, N, Tamura, T, Yao, M, Tanaka, I.
登録日2006-03-08
公開日2007-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of the putative transcriptional regulator SCO7518 from Streptomyces coelicolor A3(2)
To be Published
2DG6
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Crystal structure of the putative transcriptional regulator SCO5550 from Streptomyces coelicolor A3(2)
分子名称: putative transcriptional regulator
著者Hayashi, T, Tanaka, Y, Sakai, N, Yao, M, Tamura, T, Tanaka, I.
登録日2006-03-08
公開日2007-03-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and genomic DNA analysis of a putative transcription factor SCO5550 from Streptomyces coelicolor A3(2): regulating the expression of gene sco5551 as a transcriptional activator with a novel dimer shape
Biochem. Biophys. Res. Commun., 435, 2013
8KFH
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BU of 8kfh by Molmil
Crystal structure of sperm whale myoglobin reconstituted with manganese porphycene
分子名称: Myoglobin, PORPHYCENE CONTAINING MN, SULFATE ION
著者Mizohata, E, Oohora, K, Hayashi, T.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
8KFJ
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BU of 8kfj by Molmil
Crystal structure of sperm whale myoglobin (F46L/H64A mutant) reconstituted with manganese porphycene
分子名称: CHLORIDE ION, Myoglobin, PORPHYCENE CONTAINING MN, ...
著者Mizohata, E, Oohora, K, Hayashi, T.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
8KFI
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BU of 8kfi by Molmil
Crystal structure of sperm whale myoglobin (F43A/H64I mutant) reconstituted with manganese porphycene
分子名称: Myoglobin, PORPHYCENE CONTAINING MN, SULFATE ION
著者Mizohata, E, Oohora, K, Hayashi, T.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
8WF5
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Horse heart myoglobin reconstituted with an iron complex of porphyrin bearing two CF3 groups (rMb(FePor(CF3)2))
分子名称: GLYCEROL, Myoglobin, PROTOPORPHYRIN(CF3)2 CONTAINING FE, ...
著者Kagawa, Y, Oohora, K, Himiyama, T, Suzuki, A, Hayashi, T.
登録日2023-09-19
公開日2024-06-12
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Redox Engineering of Myoglobin by Cofactor Substitution to Enhance Cyclopropanation Reactivity.
Angew.Chem.Int.Ed.Engl., 63, 2024
8ACV
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BU of 8acv by Molmil
WelO5* bound to Zn(II), Cl, and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, ACETATE ION, CHLORIDE ION, ...
著者Buller, R, Hueppi, S, Voss, M, Hayashi, T.
登録日2022-07-07
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Enzyme engineering enables inversion of substrate stereopreference of the halogenase WelO5*
Chemcatchem, 2022
6F17
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BU of 6f17 by Molmil
Structure of Mb NMH H64V, V68A mutant resting state
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2017-11-21
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
6F19
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Structure of Mb NMH H64V, V68A mutant complex with EDA incubated at room temperature for 5 min
分子名称: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2017-11-21
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
6F1A
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BU of 6f1a by Molmil
Structure of Mb NMH H64V, V68A mutant complex with EDA incubated at room temperature for 20 min
分子名称: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2017-11-21
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
6F18
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Structure of Mb NMH H64V, V68A mutant complex with EDA
分子名称: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2017-11-21
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
6G5A
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Heme-carbene complex in myoglobin H64V/V68A containing an N-methylhistidine as the proximal ligand, 1.48 angstrom resolution
分子名称: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2018-03-29
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.483 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
6G5B
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Heme-carbene complex in myoglobin H64V/V68A containing an N-methylhistidine as the proximal ligand, 1.6 angstrom resolution
分子名称: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2018-03-29
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018

 

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