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PDB: 43 results

3AT6
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Side-necked turtle (Pleurodira, Chelonia, REPTILIA) hemoglobin: cDNA-derived primary structures and X-ray crystal structures of Hb A
Descriptor: AlphaA-globin, Beta-globin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hasegawa, T, Shishikura, F, Kuwada, T.
Deposit date:2010-12-26
Release date:2011-04-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Side-necked turtle (Pleurodira, Chelonia, reptilia) hemoglobin: cDNA-derived primary structures and X-ray crystal structures of Hb A.
Iubmb Life, 63, 2011
3AT5
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Side-necked turtle (Pleurodira, Chelonia, REPTILIA) hemoglobin: cDNA-derived primary structures and X-ray crystal structures of Hb A
Descriptor: AlphaA-globin, Beta-globin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hasegawa, T, Shishikura, F, Kuwada, T.
Deposit date:2010-12-26
Release date:2011-04-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Side-necked turtle (Pleurodira, Chelonia, reptilia) hemoglobin: cDNA-derived primary structures and X-ray crystal structures of Hb A.
Iubmb Life, 63, 2011
2DPH
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BU of 2dph by Molmil
Crystal Structure of Formaldehyde dismutase
Descriptor: Formaldehyde dismutase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Hasegawa, T, Yamano, A, Yanase, H.
Deposit date:2006-05-11
Release date:2007-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The X-ray crystal structure of formaldehyde dismutase at 2.3 A resolution
Acta Crystallogr.,Sect.A, 58, 2002
3WCT
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The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: Oxygenated form
Descriptor: A1 globin chain of giant V2 hemoglobin, A2 globin chain of giant V2 hemoglobin, B1 globin chain of giant V2 hemoglobin, ...
Authors:Numoto, N, Nakagawa, T, Ohara, R, Hasegawa, T, Kita, A, Yoshida, T, Maruyama, T, Imai, K, Fukumori, Y, Miki, K.
Deposit date:2013-06-01
Release date:2014-06-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of a deoxygenated 400 kDa haemoglobin reveals ternary- and quaternary-structural changes of giant haemoglobins
Acta Crystallogr.,Sect.D, 70, 2014
1ERZ
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CRYSTAL STRUCTURE OF N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE WITH A NOVEL CATALYTIC FRAMEWORK COMMON TO AMIDOHYDROLASES
Descriptor: N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE
Authors:Nakai, T, Hasegawa, T, Yamashita, E, Yamamoto, M, Kumasaka, T, Ueki, T, Nanba, H, Ikenaka, Y, Takahashi, S, Sato, M, Tsukihara, T.
Deposit date:2000-04-06
Release date:2001-04-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases.
Structure Fold.Des., 8, 2000
5YGX
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BU of 5ygx by Molmil
Structure of BACE1 in complex with N-(3-((4R,5R,6S)-2-amino-6-(1,1-difluoroethyl)-5-fluoro-4-methyl-5,6-dihydro-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-(fluoromethoxy)pyrazine-2-carboxamide
Descriptor: Beta-secretase 1, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Nakahara, K, Fuchino, K, Komano, K, Asada, N, Tadano, G, Hasegawa, T, Yamamoto, T, Sako, Y, Ogawa, M, Unemura, C, Hosono, M, Sakaguchi, G, Ando, S, Ohnishi, S, Kido, Y, Fukushima, T, Dhuyvetter, D, Borghys, H, Gijsen, H, Yamano, Y, Iso, Y, Kusakabe, K.
Deposit date:2017-09-27
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Potent and Centrally Active 6-Substituted 5-Fluoro-1,3-dihydro-oxazine beta-Secretase (BACE1) Inhibitors via Active Conformation Stabilization
J. Med. Chem., 61, 2018
1J1B
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BU of 1j1b by Molmil
Binary complex structure of human tau protein kinase I with AMPPNP
Descriptor: Glycogen synthase kinase-3 beta, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Aoki, M, Yokota, T, Sugiura, I, Sasaki, C, Hasegawa, T, Okumura, C, Kohno, T, Sugio, S, Matsuzaki, T.
Deposit date:2002-12-03
Release date:2003-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into nucleotide recognition in tau-protein kinase I/glycogen synthase kinase 3 beta.
Acta Crystallogr.,Sect.D, 60, 2004
1J1C
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Binary complex structure of human tau protein kinase I with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glycogen synthase kinase-3 beta, MAGNESIUM ION
Authors:Aoki, M, Yokota, T, Sugiura, I, Sasaki, C, Hasegawa, T, Okumura, C, Kohno, T, Sugio, S, Matsuzaki, T.
Deposit date:2002-12-03
Release date:2003-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into nucleotide recognition in tau-protein kinase I/glycogen synthase kinase 3 beta.
Acta Crystallogr.,Sect.D, 60, 2004
1X3K
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BU of 1x3k by Molmil
Crystal structure of a hemoglobin component (TA-V) from Tokunagayusurika akamusi
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, hemoglobin component V
Authors:Kuwada, T, Hasegawa, T, Sato, S, Sato, I, Ishikawa, K, Takagi, T, Shishikura, F.
Deposit date:2005-05-09
Release date:2005-05-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structures of two hemoglobin components from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera).
Gene, 398, 2007
1X46
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Crystal structure of a hemoglobin component (TA-VII) from Tokunagayusurika akamusi
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, hemoglobin component VII
Authors:Kuwada, T, Hasegawa, T, Sato, S, Sato, I, Ishikawa, K, Takagi, T, Shishikura, F.
Deposit date:2005-05-14
Release date:2005-05-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of two hemoglobin components from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera).
Gene, 398, 2007
1WMU
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BU of 1wmu by Molmil
Crystal Structure of Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea, at 1.65 A resolution
Descriptor: Hemoglobin A and D beta chain, Hemoglobin D alpha chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kuwada, T, Hasegawa, T, Satoh, I, Ishikawa, K, Shishikura, F.
Deposit date:2004-07-21
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea, at 1.65 A resolution
To be Published
1V75
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BU of 1v75 by Molmil
Crystal structure of hemoglobin D from the Aldabra giant tortoise (Geochelone gigantea) at 2.0 A resolution
Descriptor: Hemoglobin A and D beta chain, Hemoglobin D alpha chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kuwada, T, Hasegawa, T, Satoh, I, Ishikawa, K, Shishikura, F.
Deposit date:2003-12-12
Release date:2003-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystallization and preliminary X-ray diffraction study of hemoglobin D from the Aldabra giant tortoise, Geochelone gigantea.
Protein Pept.Lett., 10, 2003
2ZWJ
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BU of 2zwj by Molmil
Crystal structure of a hemoglobin component V from Propsilocerus akamusi (pH4.6 coordinates)
Descriptor: Hemoglobin V, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kuwada, T, Hasegawa, T, Takagi, T, Shishikura, F.
Deposit date:2008-12-13
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:pH-dependent structural changes in haemoglobin component V from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera)
Acta Crystallogr.,Sect.D, 66, 2010
3A5A
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BU of 3a5a by Molmil
Crystal structure of a hemoglobin component V from Propsilocerus akamusi (pH5.6 coordinates)
Descriptor: Hemoglobin V, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kuwada, T, Hasegawa, T, Takagi, T, Shishikura, F.
Deposit date:2009-08-05
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:pH-dependent structural changes in haemoglobin component V from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera)
Acta Crystallogr.,Sect.D, 66, 2010
2ZQO
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BU of 2zqo by Molmil
Crystal structure of the earthworm R-type lectin C-half in complex with GalNAc
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 29-kDa galactose-binding lectin, CADMIUM ION, ...
Authors:Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
Deposit date:2008-08-13
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009
2ZQN
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BU of 2zqn by Molmil
Crystal structure of the earthworm R-type lectin C-half in complex with Lactose
Descriptor: 29-kDa galactose-binding lectin, IMIDAZOLE, PHOSPHATE ION, ...
Authors:Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
Deposit date:2008-08-13
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009
2Z6N
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Crystal Structure of Carbonmonoxy Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea
Descriptor: CARBON MONOXIDE, Hemoglobin A/D subunit beta, Hemoglobin D subunit alpha, ...
Authors:Kuwada, T, Hasegawa, T, Sato, I, Ishikawa, K, Shishikura, F.
Deposit date:2007-08-04
Release date:2007-08-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal Structure of the Ligated Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea
To be Published
1J1J
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Crystal Structure of human Translin
Descriptor: Translin
Authors:Sugiura, I, Sasaki, C, Hasegawa, T, Kohno, T, Sugio, S, Moriyama, H, Kasai, M, Matsuzaki, T.
Deposit date:2002-12-06
Release date:2003-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human translin at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1WCZ
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Crystal structure of an alkaline form of v8 protease from Staphylococcus aureus
Descriptor: Glutamyl endopeptidase, ZINC ION
Authors:Yamada, K, Ohta, M, Hasegawa, T, Torii, K, Murakami, M, Kouyama, K.
Deposit date:2004-05-10
Release date:2004-06-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an alkaline form of v8 protease from Staphylococcus aureus
To be Published
1IZ9
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Crystal Structure of Malate Dehydrogenase from Thermus thermophilus HB8
Descriptor: MALATE DEHYDROGENASE
Authors:Hirose, R, Hasegawa, T, Yamano, A, Kuramitsu, S, Hamada, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-01
Release date:2002-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Malate Dehydrogenase from Thermus themrophilus HB8
To be published
3WCU
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The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: Deoxygenated form
Descriptor: A1 globin chain of giant V2 hemoglobin, A2 globin chain of giant V2 hemoglobin, B1 globin chain of giant V2 hemoglobin, ...
Authors:Numoto, N, Nakagawa, T, Ohara, R, Hasegawa, T, Kita, A, Yoshida, T, Maruyama, T, Imai, K, Fukumori, Y, Miki, K.
Deposit date:2013-06-01
Release date:2014-06-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of a deoxygenated 400 kDa haemoglobin reveals ternary- and quaternary-structural changes of giant haemoglobins
Acta Crystallogr.,Sect.D, 70, 2014
3WCV
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The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: CA bound form
Descriptor: A1 globin chain of giant V2 hemoglobin, A2 globin chain of giant V2 hemoglobin, B1 globin chain of giant V2 hemoglobin, ...
Authors:Numoto, N, Nakagawa, T, Ohara, R, Hasegawa, T, Kita, A, Yoshida, T, Maruyama, T, Imai, K, Fukumori, Y, Miki, K.
Deposit date:2013-06-01
Release date:2014-06-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of a deoxygenated 400 kDa haemoglobin reveals ternary- and quaternary-structural changes of giant haemoglobins
Acta Crystallogr.,Sect.D, 70, 2014
3WCW
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The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: MG bound form
Descriptor: A1 globin chain of giant V2 hemoglobin, A2 globin chain of giant V2 hemoglobin, B1 globin chain of giant V2 hemoglobin, ...
Authors:Numoto, N, Nakagawa, T, Ohara, R, Hasegawa, T, Kita, A, Yoshida, T, Maruyama, T, Imai, K, Fukumori, Y, Miki, K.
Deposit date:2013-06-01
Release date:2014-06-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of a deoxygenated 400 kDa haemoglobin reveals ternary- and quaternary-structural changes of giant haemoglobins
Acta Crystallogr.,Sect.D, 70, 2014
3WL2
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Monoclinic Lysozyme at 0.96 A resolution
Descriptor: 1,2-ETHANEDIOL, Lysozyme C, NITRATE ION, ...
Authors:Matsumoto, T, Yamano, A, Hasegawa, T, Maeyama, M.
Deposit date:2013-11-06
Release date:2014-11-12
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Evaluation of Rigaku XtaLAB P200
To be Published
3ARL
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BU of 3arl by Molmil
Cl- binding hemoglobin component V form Propsilocerus akamusi under 500 mM NaCl at pH 5.5
Descriptor: CHLORIDE ION, Hemoglobin V, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kuwada, T, Hasegawa, T, Takagi, T, Shishikura, F.
Deposit date:2010-12-02
Release date:2011-04-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Involvement of the distal Arg residue in Cl- binding of midge larval haemoglobin
Acta Crystallogr.,Sect.D, 67, 2011

 

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