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PDB: 96 results

3WWJ
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BU of 3wwj by Molmil
Crystal structure of an engineered sitagliptin-producing transaminase, ATA-117-Rd11
Descriptor: (R)-amine transaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Hou, F, Ito, N, Yasohara, Y, Tanokura, M.
Deposit date:2014-06-18
Release date:2015-08-12
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3WWH
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BU of 3wwh by Molmil
Crystal structure of the first R-stereoselective -transaminase identified from Arthrobacter sp. KNK168 (FERM-BP-5228)
Descriptor: (R)-amine transaminase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
Authors:Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Ito, N, Yasohara, Y, Tanokura, M.
Deposit date:2014-06-18
Release date:2015-08-12
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3WV4
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Crystal structure of VinN
Descriptor: Non-ribosomal peptide synthetase
Authors:Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
Deposit date:2014-05-15
Release date:2014-10-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3WVN
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Complex structure of VinN with L-aspartate
Descriptor: ASPARTIC ACID, Non-ribosomal peptide synthetase
Authors:Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
Deposit date:2014-05-30
Release date:2014-10-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3WI3
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BU of 3wi3 by Molmil
Crystal Structure of the Sld3/Treslin domain from yeast Sld3
Descriptor: 1,2-ETHANEDIOL, DNA replication regulator SLD3, SULFATE ION
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2013-09-05
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the homology domain of the eukaryotic DNA replication proteins sld3/treslin.
Structure, 22, 2014
3X37
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Crystal structure of the N-terminal domain of Sld7 in complex with Sld3
Descriptor: GLYCEROL, Mitochondrial morphogenesis protein SLD7, ZYRO0C14696p
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2015-01-16
Release date:2015-08-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3.
Acta Crystallogr.,Sect.D, 71, 2015
3X38
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BU of 3x38 by Molmil
Crystal structure of the C-terminal domain of Sld7
Descriptor: GLYCEROL, Mitochondrial morphogenesis protein SLD7, SULFATE ION
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2015-01-16
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3.
Acta Crystallogr.,Sect.D, 71, 2015
3VW4
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BU of 3vw4 by Molmil
Crystal structure of the DNA-binding domain of ColE2-P9 Rep in complex with the replication origin
Descriptor: DNA (5'-D(P*AP*AP*TP*GP*AP*GP*AP*CP*CP*AP*GP*AP*TP*AP*AP*GP*CP*CP*TP*TP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*AP*AP*GP*GP*CP*TP*TP*AP*TP*CP*TP*GP*GP*TP*CP*TP*CP*AP*TP*T)-3'), Rep, ...
Authors:Itou, H, Yagura, M, Itoh, T, Shirakihara, Y.
Deposit date:2012-07-31
Release date:2013-07-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Replication Origin Unwinding by An Initiator-Primase of Plasmid ColE2-P9: Duplex DNA Unwinding by A Single Protein
J.Biol.Chem., 290, 2015
3WV5
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BU of 3wv5 by Molmil
Complex structure of VinN with 3-methylaspartate
Descriptor: (2S,3S)-3-methyl-aspartic acid, Non-ribosomal peptide synthetase
Authors:Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
Deposit date:2014-05-15
Release date:2014-10-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
2MST
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BU of 2mst by Molmil
MUSASHI1 RBD2, NMR
Descriptor: PROTEIN (MUSASHI1)
Authors:Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
Deposit date:1999-05-19
Release date:2000-05-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
2MSS
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BU of 2mss by Molmil
MUSASHI1 RBD2, NMR
Descriptor: PROTEIN (MUSASHI1)
Authors:Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
Deposit date:1999-05-19
Release date:2000-05-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
2NVL
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BU of 2nvl by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfonic acid form)
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
Deposit date:2006-11-13
Release date:2007-11-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2YVE
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BU of 2yve by Molmil
Crystal structure of the methylene blue-bound form of the multi-drug binding transcriptional repressor CgmR
Descriptor: 3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM, CHLORIDE ION, GLYCEROL, ...
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
2YVH
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BU of 2yvh by Molmil
Crystal structure of the operator-binding form of the multi-drug binding transcriptional repressor CgmR
Descriptor: 5'-D(*DGP*DGP*DTP*DCP*DGP*DGP*DTP*DAP*DCP*DAP*DGP*DTP*DTP*DA)-3', 5'-D(*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DAP*DCP*DCP*DGP*DAP*DCP*DC)-3', Transcriptional regulator
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
3AGE
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BU of 3age by Molmil
Crystal structure of Mglu in its L-glutamate binding form in the presence of 4.3M NaCl
Descriptor: GLUTAMIC ACID, Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y, Yumoto, I.
Deposit date:2010-03-30
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Salt-induced conformational change of salt-tolerant glutaminase from Micrococcus luteus K-3
To be Published
3AGF
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BU of 3agf by Molmil
Crystal structure of Bacillus glutaminase in the presence of 4.3M NaCl
Descriptor: Glutaminase 1
Authors:Yoshimune, K, Shirakihara, Y, Yumoto, I.
Deposit date:2010-03-30
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Salt-induced conformational change of salt-tolerant glutaminase from Micrococcus luteus K-3
To be Published
3AGD
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BU of 3agd by Molmil
Crystal structure of Mglu in its native form in the presence of 4.3M NaCl
Descriptor: Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y, Yumoto, I.
Deposit date:2010-03-30
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Salt-induced conformational change of salt-tolerant glutaminase from Micrococcus luteus K-3
To be Published
2ZOZ
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BU of 2zoz by Molmil
Crystal structure of the ethidium-bound form of the multi-drug binding transcriptional repressor CgmR
Descriptor: ETHIDIUM, GLYCEROL, SULFATE ION, ...
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2008-06-20
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
2Z5H
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BU of 2z5h by Molmil
Crystal structure of the head-to-tail junction of tropomyosin complexed with a fragment of TnT
Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, Tropomyosin alpha-1 chain and General control protein GCN4, Troponin T, ...
Authors:Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T.
Deposit date:2007-07-12
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T
Proc.Natl.Acad.Sci.USA, 105, 2008
2Z5I
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BU of 2z5i by Molmil
Crystal structure of the head-to-tail junction of tropomyosin
Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, MAGNESIUM ION, Tropomyosin alpha-1 chain and General control protein GCN4
Authors:Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T.
Deposit date:2007-07-12
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T
Proc.Natl.Acad.Sci.USA, 105, 2008
2ZCT
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BU of 2zct by Molmil
Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Hagihara, Y, Abe, M, Inoue, T, Yamamoto, T, Matsumura, H.
Deposit date:2007-11-12
Release date:2008-05-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
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