Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 118 件
4H4R
DownloadVisualize
BU of 4h4r by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/Q177G mutant (oxidized form)
分子名称: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
著者Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
登録日2012-09-18
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
2DCM
DownloadVisualize
BU of 2dcm by Molmil
The Crystal Structure of S603A Mutated Prolyl Tripeptidyl Aminopeptidase Complexed with Substrate
分子名称: GLYCYLALANYL-N-2-NAPHTHYL-L-PROLINEAMIDE, dipeptidyl aminopeptidase IV, putative
著者Nakajima, Y, Ito, K, Xu, Y, Yamada, N, Onohara, Y, Yoshimoto, T.
登録日2006-01-09
公開日2006-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure and Mechanism of Tripeptidyl Activity of Prolyl Tripeptidyl Aminopeptidase from Porphyromonas gingivalis
J.Mol.Biol., 362, 2006
6B19
DownloadVisualize
BU of 6b19 by Molmil
Architecture of HIV-1 reverse transcriptase initiation complex core
分子名称: RNA genome fragment, reverse transcriptase p51 subunit, reverse transcriptase p66 subunit, ...
著者Larsen, K.P, Mathiharan, Y.K, Chen, D.H, Puglisi, J.D, Skiniotis, G, Puglisi, E.V.
登録日2017-09-18
公開日2018-04-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Architecture of an HIV-1 reverse transcriptase initiation complex.
Nature, 557, 2018
2D5L
DownloadVisualize
BU of 2d5l by Molmil
Crystal Structure of Prolyl Tripeptidyl Aminopeptidase from Porphyromonas gingivalis
分子名称: SULFATE ION, dipeptidyl aminopeptidase IV, putative
著者Nakajima, Y, Ito, K, Xu, Y, Yamada, N, Onohara, Y, Yoshimoto, T.
登録日2005-11-02
公開日2006-09-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure and Mechanism of Tripeptidyl Activity of Prolyl Tripeptidyl Aminopeptidase from Porphyromonas gingivalis
J.Mol.Biol., 362, 2006
2DQ6
DownloadVisualize
BU of 2dq6 by Molmil
Crystal Structure of Aminopeptidase N from Escherichia coli
分子名称: Aminopeptidase N, SULFATE ION, ZINC ION
著者Nakajima, Y, Onohara, Y, Ito, K, Yoshimoto, T.
登録日2006-05-22
公開日2006-08-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Aminopeptidase N (proteobacteria alanyl aminopeptidase) from Escherichia coli: Crystal structure and conformational change of the methionine 260 residue involved in substrate recognition
J.Biol.Chem., 281, 2006
3WY8
DownloadVisualize
BU of 3wy8 by Molmil
Crystal Structure of Protease Anisep from Arthrobacter Nicotinovorans
分子名称: Serine protease
著者Sone, T, Haraguchi, Y, Kuwahara, A, Ose, T, Takano, M, Abe, A, Tanaka, M, Tanaka, I, Asano, K.
登録日2014-08-20
公開日2015-08-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization reveals the keratinolytic activity of an arthrobacter nicotinovorans protease.
Protein Pept.Lett., 22, 2015
1IYX
DownloadVisualize
BU of 1iyx by Molmil
Crystal structure of enolase from Enterococcus hirae
分子名称: ENOLASE, GLYCEROL, MAGNESIUM ION, ...
著者Hosaka, T, Meguro, T, Yamato, I, Shirakihara, Y.
登録日2002-09-12
公開日2003-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Enterococcus hirae Enolase at 2.8 A Resolution
J.BIOCHEM.(TOKYO), 133, 2003
2RPA
DownloadVisualize
BU of 2rpa by Molmil
The solution structure of N-terminal domain of microtubule severing enzyme
分子名称: Katanin p60 ATPase-containing subunit A1
著者Iwaya, N, Kuwahara, Y, Unzai, S, Nagata, T, Tomii, K, Goda, N, Tochio, H, Shirakawa, M, Hiroaki, H.
登録日2008-05-13
公開日2009-05-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A common substrate recognition mode conserved between katanin P60 and VPS4 governs microtubule severing and membrane skeleton reorganization
J.Biol.Chem., 285, 2010
1V84
DownloadVisualize
BU of 1v84 by Molmil
Crystal structure of human GlcAT-P in complex with N-acetyllactosamine, Udp, and Mn2+
分子名称: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, L(+)-TARTARIC ACID, MANGANESE (II) ION, ...
著者Kakuda, S, Shiba, T, Ishiguro, M, Tagawa, H, Oka, S, Kajihara, Y, Kawasaki, T, Wakatsuki, S, Kato, R.
登録日2003-12-27
公開日2004-05-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural Basis for Acceptor Substrate Recognition of a Human Glucuronyltransferase, GlcAT-P, an Enzyme Critical in the Biosynthesis of the Carbohydrate Epitope HNK-1
J.Biol.Chem., 279, 2004
1V83
DownloadVisualize
BU of 1v83 by Molmil
Crystal structure of human GlcAT-P in complex with Udp and Mn2+
分子名称: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, L(+)-TARTARIC ACID, MANGANESE (II) ION, ...
著者Kakuda, S, Shiba, T, Ishiguro, M, Tagawa, H, Oka, S, Kajihara, Y, Kawasaki, T, Wakatsuki, S, Kato, R.
登録日2003-12-27
公開日2004-05-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for Acceptor Substrate Recognition of a Human Glucuronyltransferase, GlcAT-P, an Enzyme Critical in the Biosynthesis of the Carbohydrate Epitope HNK-1
J.Biol.Chem., 279, 2004
1V82
DownloadVisualize
BU of 1v82 by Molmil
Crystal structure of human GlcAT-P apo form
分子名称: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1, L(+)-TARTARIC ACID
著者Kakuda, S, Shiba, T, Ishiguro, M, Tagawa, H, Oka, S, Kajihara, Y, Kawasaki, T, Wakatsuki, S, Kato, R.
登録日2003-12-27
公開日2004-05-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis for Acceptor Substrate Recognition of a Human Glucuronyltransferase, GlcAT-P, an Enzyme Critical in the Biosynthesis of the Carbohydrate Epitope HNK-1
J.Biol.Chem., 279, 2004
2DSK
DownloadVisualize
BU of 2dsk by Molmil
Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus
分子名称: GLYCEROL, SULFATE ION, chitinase
著者Nakamura, T, Mine, S, Hagihara, Y, Ishikawa, K, Uegaki, K.
登録日2006-06-30
公開日2007-02-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the catalytic domain of the hyperthermophilic chitinase from Pyrococcus furiosus
ACTA CRYSTALLOGR.,SECT.F, 63, 2007
3EOQ
DownloadVisualize
BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
分子名称: Putative zinc protease
著者Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
登録日2008-09-29
公開日2009-03-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
3WWH
DownloadVisualize
BU of 3wwh by Molmil
Crystal structure of the first R-stereoselective -transaminase identified from Arthrobacter sp. KNK168 (FERM-BP-5228)
分子名称: (R)-amine transaminase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
著者Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Ito, N, Yasohara, Y, Tanokura, M.
登録日2014-06-18
公開日2015-08-12
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3WWI
DownloadVisualize
BU of 3wwi by Molmil
Crystal structure of the G136F mutant of the first R-stereoselective -transaminase identified from Arthrobacter sp. KNK168 (FERM-BP-5228)
分子名称: (R)-amine transaminase, PYRIDOXAL-5'-PHOSPHATE
著者Guan, L.J, Ohtsuka, J, Miyakawa, T, Zhi, Y, Ito, N, Yasohara, Y, Tanokura, M.
登録日2014-06-18
公開日2015-08-19
最終更新日2020-01-22
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
2CZN
DownloadVisualize
BU of 2czn by Molmil
Solution structure of the chitin-binding domain of hyperthermophilic chitinase from pyrococcus furiosus
分子名称: chitinase
著者Uegaki, T, Ikegami, T, Nakamura, T, Hagihara, Y, Mine, S, Inoue, T, Matsumura, H, Ataka, M, Ishikawa, K.
登録日2005-07-13
公開日2006-07-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Tertiary structure and carbohydrate recognition by the chitin-binding domain of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Mol.Biol., 381, 2008
2E2G
DownloadVisualize
BU of 2e2g by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (pre-oxidation form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-13
公開日2007-11-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2E2M
DownloadVisualize
BU of 2e2m by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfinic acid form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-14
公開日2007-11-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
3WWJ
DownloadVisualize
BU of 3wwj by Molmil
Crystal structure of an engineered sitagliptin-producing transaminase, ATA-117-Rd11
分子名称: (R)-amine transaminase, PYRIDOXAL-5'-PHOSPHATE
著者Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Hou, F, Ito, N, Yasohara, Y, Tanokura, M.
登録日2014-06-18
公開日2015-08-12
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3X37
DownloadVisualize
BU of 3x37 by Molmil
Crystal structure of the N-terminal domain of Sld7 in complex with Sld3
分子名称: GLYCEROL, Mitochondrial morphogenesis protein SLD7, ZYRO0C14696p
著者Itou, H, Araki, H, Shirakihara, Y.
登録日2015-01-16
公開日2015-08-19
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3.
Acta Crystallogr.,Sect.D, 71, 2015
3WI3
DownloadVisualize
BU of 3wi3 by Molmil
Crystal Structure of the Sld3/Treslin domain from yeast Sld3
分子名称: 1,2-ETHANEDIOL, DNA replication regulator SLD3, SULFATE ION
著者Itou, H, Araki, H, Shirakihara, Y.
登録日2013-09-05
公開日2014-08-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the homology domain of the eukaryotic DNA replication proteins sld3/treslin.
Structure, 22, 2014
3VW4
DownloadVisualize
BU of 3vw4 by Molmil
Crystal structure of the DNA-binding domain of ColE2-P9 Rep in complex with the replication origin
分子名称: DNA (5'-D(P*AP*AP*TP*GP*AP*GP*AP*CP*CP*AP*GP*AP*TP*AP*AP*GP*CP*CP*TP*TP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*AP*AP*GP*GP*CP*TP*TP*AP*TP*CP*TP*GP*GP*TP*CP*TP*CP*AP*TP*T)-3'), Rep, ...
著者Itou, H, Yagura, M, Itoh, T, Shirakihara, Y.
登録日2012-07-31
公開日2013-07-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for Replication Origin Unwinding by An Initiator-Primase of Plasmid ColE2-P9: Duplex DNA Unwinding by A Single Protein
J.Biol.Chem., 290, 2015
3IHA
DownloadVisualize
BU of 3iha by Molmil
Crystal Structure Analysis of Mglu in its glutamate form
分子名称: GLUTAMIC ACID, Salt-tolerant glutaminase
著者Yoshimune, K, Shirakihara, Y.
登録日2009-07-29
公開日2010-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010
3IH8
DownloadVisualize
BU of 3ih8 by Molmil
Crystal Structure Analysis of Mglu in its native form
分子名称: Salt-tolerant glutaminase
著者Yoshimune, K, Shirakihara, Y.
登録日2009-07-29
公開日2010-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010
3IH9
DownloadVisualize
BU of 3ih9 by Molmil
Crystal Structure Analysis of Mglu in its tris form
分子名称: Salt-tolerant glutaminase
著者Yoshimune, K, Shirakihara, Y.
登録日2009-07-29
公開日2010-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon