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PDB: 215 results

2CVJ
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Crystal Structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, thioredoxin reductase related protein
Authors:Kashihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-04
Release date:2005-12-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8
To be Published
2CWC
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BU of 2cwc by Molmil
Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
Descriptor: ADP-ribosylglycohydrolase
Authors:Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-18
Release date:2005-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of ADP-ribosylglycohydrolase-related protein from Thermus thermophilus HB8
To be Published
1WNT
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BU of 1wnt by Molmil
Structure of the tetrameric form of Human L-Xylulose Reductase
Descriptor: L-xylulose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:El-Kabbani, O, Carbone, V, Darmanin, C, Ishikura, S, Hara, A.
Deposit date:2004-08-09
Release date:2005-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the tetrameric form of human L-Xylulose reductase: Probing the inhibitor-binding site with molecular modeling and site-directed mutagenesis
Proteins, 60, 2005
1PR9
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Human L-Xylulose Reductase Holoenzyme
Descriptor: DIHYDROGENPHOSPHATE ION, L-XYLULOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:El-Kabbani, O, Ishikura, S, Darmanin, C, Carbone, V, Chung, R.P.-T, Usami, N, Hara, A.
Deposit date:2003-06-20
Release date:2004-02-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of human L-xylulose reductase holoenzyme: probing the role of Asn107 with site-directed mutagenesis
Proteins, 55, 2004
3ADO
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BU of 3ado by Molmil
Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase
Descriptor: Lambda-crystallin
Authors:Asada, Y, Hara, A, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-01-26
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase
To be Published
8A11
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Cryo-EM structure of the Human SHMT1-RNA complex
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, cytosolic
Authors:Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
Deposit date:2022-05-30
Release date:2023-06-14
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 2024
3ADP
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Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase (NADH Form)
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Lambda-crystallin
Authors:Asada, Y, Hara, A, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-01-26
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase
To be Published
3WY8
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BU of 3wy8 by Molmil
Crystal Structure of Protease Anisep from Arthrobacter Nicotinovorans
Descriptor: Serine protease
Authors:Sone, T, Haraguchi, Y, Kuwahara, A, Ose, T, Takano, M, Abe, A, Tanaka, M, Tanaka, I, Asano, K.
Deposit date:2014-08-20
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural characterization reveals the keratinolytic activity of an arthrobacter nicotinovorans protease.
Protein Pept.Lett., 22, 2015
8R7H
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Cryo-EM structure of Human SHMT1
Descriptor: Serine hydroxymethyltransferase, cytosolic
Authors:Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
Deposit date:2023-11-24
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 2024
3EOQ
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BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
Descriptor: Putative zinc protease
Authors:Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2008-09-29
Release date:2009-03-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
2ISM
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BU of 2ism by Molmil
Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (TTHA0570) from thermus theromophilus HB8
Descriptor: CALCIUM ION, CHLORIDE ION, Putative oxidoreductase
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Ebihara, A, Shinkai, A, Nakagawa, N, Shimizu, N, Yamamoto, M, Kuramitsu, S, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-18
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Putative Oxidoreductase (Glucose Dehydrogenase) (TTHA0570) from Thermus Theromophilus HB8
To be Published
2IS8
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Crystal structure of the Molybdopterin biosynthesis enzyme MoaB (TTHA0341) from thermus theromophilus HB8
Descriptor: FORMIC ACID, Molybdopterin biosynthesis enzyme, MoaB
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Baba, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of the molybdopterin biosynthesis enzyme MoaB (TTHA0341) from thermus theromophilus HB8
To be Published
2IRP
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BU of 2irp by Molmil
Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Putative aldolase class 2 protein aq_1979
Authors:Jeyakanthan, J, Gayathri, D, Yogavel, M, Velmurugan, D, Baba, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
To be Published
2IEX
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BU of 2iex by Molmil
Crystal structure of dihydroxynapthoic acid synthetase (GK2873) from Geobacillus kaustophilus HTA426
Descriptor: Dihydroxynapthoic acid synthetase
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, BaBa, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-19
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of dihydroxynapthoic acid synthetase (GK2873) from Geobacillus kaustophilus HTA426
To be Published
2IIH
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BU of 2iih by Molmil
Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from thermus theromophilus HB8 (H32 form)
Descriptor: Molybdenum cofactor biosynthesis protein C, PHOSPHATE ION
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Baba, S, Chen, L, Liu, Z.-J, Wang, B.-C, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-28
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from thermus theromophilus HB8 (H32 form)
To be Published
2IHY
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BU of 2ihy by Molmil
Structure of the Staphylococcus aureus putative ATPase subunit of an ATP-binding cassette (ABC) transporter
Descriptor: ABC transporter, ATP-binding protein, SULFATE ION
Authors:McGrath, T.E, Yu, C.S, Romanov, V, Lam, R, Dharamsi, A, Virag, C, Mansoury, K, Thambipillai, D, Richards, D, Guthrie, J, Edwards, A.M, Pai, E.F, Chirgadze, N.Y.
Deposit date:2006-09-27
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Staphylococcus aureus putative ATPase subunit of an ATP-binding cassette (ABC) transporter
To be Published
2IP4
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BU of 2ip4 by Molmil
Crystal Structure of Glycinamide Ribonucleotide Synthetase from Thermus thermophilus HB8
Descriptor: Phosphoribosylamine--glycine ligase, SULFATE ION
Authors:Sampei, G, Baba, S, Kanagawa, M, Yanai, H, Ishii, T, Kawai, H, Fukai, Y, Ebihara, A, Nakagawa, N, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-11
Release date:2007-10-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
8WDV
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BU of 8wdv by Molmil
Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
Authors:Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
Deposit date:2023-09-16
Release date:2024-02-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
8WDU
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Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by sucrose density
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
Authors:Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
Deposit date:2023-09-16
Release date:2024-02-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
6WTH
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Full-length human ENaC ECD
Descriptor: 10D4 Fab, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Posert, R, Baconguis, I, Noreng, S, Bharadwaj, A, Houser, A.
Deposit date:2020-05-02
Release date:2020-08-12
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Molecular principles of assembly, activation, and inhibition in epithelial sodium channel.
Elife, 9, 2020
8BV0
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Binary complex between the NB-ARC domain from the Tomato immune receptor NRC1 and the SPRY domain-containing effector SS15 from the potato cyst nematode
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NRC1, Truncated secreted SPRY domain-containing protein 15 (Fragment)
Authors:Contreras, M.P, Pai, H, Muniyandi, S, Toghani, A, Lawson, D.M, Tumtas, Y, Duggan, C, Yuen, E.L.H, Stevenson, C.E.M, Harant, A, Wu, C.H, Bozkurt, T.O, Kamoun, S, Derevnina, L.
Deposit date:2022-12-01
Release date:2022-12-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Resurrection of plant disease resistance proteins via helper NLR bioengineering.
Sci Adv, 9, 2023
4XSL
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BU of 4xsl by Molmil
Crystal strcutre of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with glycerol
Descriptor: D-tagatose 3-epimerase, GLYCEROL, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
Deposit date:2015-01-22
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
4YTU
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Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with L-erythrulose
Descriptor: D-tagatose 3-epimerase, L-Erythrulose, MANGANESE (II) ION
Authors:Yoshida, H, Yoshihara, A, Ishii, T, Izumori, K, Kamitori, S.
Deposit date:2015-03-18
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
8JQ5
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Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with D-allulose
Descriptor: D-psicose, L-rhamnose isomerase, MANGANESE (II) ION, ...
Authors:Yoshida, H, Yoshihara, A.
Deposit date:2023-06-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024
8JQ6
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Crystal structure of Lactobacillus rhamnosus L-rhamnose isomerase in complex with D-allose
Descriptor: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-allopyranose, ...
Authors:Yoshida, H, Yoshihara, A.
Deposit date:2023-06-13
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:X-ray structure and characterization of a probiotic Lactobacillus rhamnosus Probio-M9 L-rhamnose isomerase.
Appl.Microbiol.Biotechnol., 108, 2024

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