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PDB: 174 件

6LTC
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Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Nonribosomal peptide synthetase, ...
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LTD
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Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form
分子名称: ADENOSINE MONOPHOSPHATE, Nonribosomal peptide synthetase, alpha-methyl-L-serine
著者Senda, T, Harada, A.
登録日2020-01-22
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
8A11
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Cryo-EM structure of the Human SHMT1-RNA complex
分子名称: PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, cytosolic
著者Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
登録日2022-05-30
公開日2023-06-14
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 2024
4GNA
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mouse SMP30/GNL-xylitol complex
分子名称: CALCIUM ION, Regucalcin, SULFATE ION, ...
著者Aizawa, S, Senda, M, Harada, A, Maruyama, N, Ishida, T, Aigaki, T, Ishigami, A, Senda, T.
登録日2012-08-17
公開日2013-04-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis of the gamma-lactone-ring formation in ascorbic acid biosynthesis by the senescence marker protein-30/gluconolactonase
Plos One, 8, 2013
4GNC
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human SMP30/GNL-1,5-AG complex
分子名称: 1,5-anhydro-D-glucitol, CALCIUM ION, Regucalcin
著者Aizawa, S, Senda, M, Harada, A, Maruyama, N, Ishida, T, Aigaki, T, Ishigami, A, Senda, T.
登録日2012-08-17
公開日2013-04-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.749 Å)
主引用文献Structural basis of the gamma-lactone-ring formation in ascorbic acid biosynthesis by the senescence marker protein-30/gluconolactonase
Plos One, 8, 2013
2III
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Crystal structure of the adenosylmethionine decarboxylase (aq_254) from aquifex aeolicus vf5
分子名称: CALCIUM ION, MAGNESIUM ION, S-adenosylmethionine decarboxylase proenzyme
著者Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Baba, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-28
公開日2007-10-09
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the adenosylmethionine decarboxylase (aq_254) from aquifex aeolicus vf5
To be Published
2P9J
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Crystal structure of AQ2171 from Aquifex aeolicus
分子名称: Hypothetical protein AQ2171
著者Yang, H, Chen, L, Agari, Y, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-26
公開日2007-05-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of AQ2171 from Aquifex aeolicus
To be Published
2PBQ
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Crystal structure of molybdenum cofactor biosynthesis (aq_061) From aquifex aeolicus VF5
分子名称: Molybdenum cofactor biosynthesis MOG
著者Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-29
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of molybdenum cofactor biosynthesis (aq_061) from aquifex aeolicus VF5
to be published
2P68
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Crystal Structure of aq_1716 from Aquifex Aeolicus VF5
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase
著者Chen, L, Chen, L.-Q, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhao, M, Dillard, B, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-16
公開日2007-04-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal Structure of aq_1716 from Aquifex aeolicus VF5
To be Published
2P8T
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Hypothetical protein PH0730 from Pyrococcus horikoshii OT3
分子名称: Hypothetical protein PH0730
著者Chen, L, Zhao, M, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, Zhu, J, Swindell, J.T, Fu, Z.-Q, Chrzas, J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-23
公開日2007-04-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Hypothetical protein PH0730 from Pyrococcus horikoshii OT3
To be Published
2PJZ
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The crystal structure of putative Cobalt transport ATP-binding protein (cbiO-2), ST1066
分子名称: Hypothetical protein ST1066, SULFATE ION
著者Hirata, K, Hasegawa, K, Ebihara, A, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-17
公開日2008-04-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of putative Cobalt transport ATP-binding protein (cbiO-2), ST1066
To be Published
2PKP
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Crystal structure of 3-isopropylmalate dehydratase (leuD)from Methhanocaldococcus Jannaschii DSM2661 (MJ1271)
分子名称: DI(HYDROXYETHYL)ETHER, Homoaconitase small subunit, ZINC ION
著者Jeyakanthan, J, Gayathri, D.R, Velmurugan, D, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-18
公開日2008-04-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate specificity determinants of the methanogen homoaconitase enzyme: structure and function of the small subunit
Biochemistry, 49, 2010
6BQN
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BU of 6bqn by Molmil
Cryo-EM structure of ENaC
分子名称: 10D4 fab, 7B1 fab, EGFP-SCNN1G chimera, ...
著者Noreng, S, Bharadwaj, A, Posert, R, Yoshioka, C, Baconguis, I.
登録日2017-11-28
公開日2018-10-10
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the human epithelial sodium channel by cryo-electron microscopy.
Elife, 7, 2018
2Q5R
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BU of 2q5r by Molmil
Structure of apo Staphylococcus aureus D-tagatose-6-phosphate kinase
分子名称: Tagatose-6-phosphate kinase
著者McGrath, T.E, Soloveychik, M, Romanov, V, Thambipillai, D, Dharamsi, A, Virag, C, Domagala, M, Pai, E.F, Edwards, A.M, Battaile, K, Chirgadze, N.Y.
登録日2007-06-01
公開日2007-06-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of apo Staphylococcus aureus D-tagatose-6-phosphate kinase
TO BE PUBLISHED
4GN8
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BU of 4gn8 by Molmil
mouse SMP30/GNL-1,5-AG complex
分子名称: 1,5-anhydro-D-glucitol, CALCIUM ION, Regucalcin, ...
著者Aizawa, S, Senda, M, Harada, A, Maruyama, N, Ishida, T, Aigaki, T, Ishigami, A, Senda, T.
登録日2012-08-17
公開日2013-04-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of the gamma-lactone-ring formation in ascorbic acid biosynthesis by the senescence marker protein-30/gluconolactonase
Plos One, 8, 2013
4GN9
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BU of 4gn9 by Molmil
mouse SMP30/GNL-glucose complex
分子名称: CALCIUM ION, Regucalcin, SULFATE ION, ...
著者Aizawa, S, Senda, M, Harada, A, Maruyama, N, Ishida, T, Aigaki, T, Ishigami, A, Senda, T.
登録日2012-08-17
公開日2013-04-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the gamma-lactone-ring formation in ascorbic acid biosynthesis by the senescence marker protein-30/gluconolactonase
Plos One, 8, 2013
4GNB
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human SMP30/GNL
分子名称: CALCIUM ION, Regucalcin
著者Aizawa, S, Senda, M, Harada, A, Maruyama, N, Ishida, T, Aigaki, T, Ishigami, A, Senda, T.
登録日2012-08-17
公開日2013-04-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of the gamma-lactone-ring formation in ascorbic acid biosynthesis by the senescence marker protein-30/gluconolactonase
Plos One, 8, 2013
2QQ4
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Crystal structure of Iron-sulfur cluster biosynthesis protein IscU (TTHA1736) from thermus thermophilus HB8
分子名称: Iron-sulfur cluster biosynthesis protein IscU, ZINC ION
著者Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Agari, Y, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-07-26
公開日2008-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of Iron-sulfur cluster biosynthesis protein IscU (TTHA1736) from thermus thermophilus HB8
To be Published
2O1B
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BU of 2o1b by Molmil
Structure of aminotransferase from Staphylococcus aureus
分子名称: Aminotransferase, class I, PYRIDOXAL-5'-PHOSPHATE
著者McGrath, T.E, Dharamsi, A, Thambipillai, D, Edwards, A.M, Pai, E.F, Chirgadze, N.Y.
登録日2006-11-28
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of aminotransferase from Staphylococcus aureus
To be Published
2IHY
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Structure of the Staphylococcus aureus putative ATPase subunit of an ATP-binding cassette (ABC) transporter
分子名称: ABC transporter, ATP-binding protein, SULFATE ION
著者McGrath, T.E, Yu, C.S, Romanov, V, Lam, R, Dharamsi, A, Virag, C, Mansoury, K, Thambipillai, D, Richards, D, Guthrie, J, Edwards, A.M, Pai, E.F, Chirgadze, N.Y.
登録日2006-09-27
公開日2007-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the Staphylococcus aureus putative ATPase subunit of an ATP-binding cassette (ABC) transporter
To be Published
2IP4
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Crystal Structure of Glycinamide Ribonucleotide Synthetase from Thermus thermophilus HB8
分子名称: Phosphoribosylamine--glycine ligase, SULFATE ION
著者Sampei, G, Baba, S, Kanagawa, M, Yanai, H, Ishii, T, Kawai, H, Fukai, Y, Ebihara, A, Nakagawa, N, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-10-11
公開日2007-10-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2PCL
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Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5
分子名称: 1,2-ETHANEDIOL, Lipoprotein-releasing system ATP-binding protein lolD, MAGNESIUM ION, ...
著者Jeyakanthan, J, Kanaujia, S.P, Rafi, Z.A, Sekar, K, Ebihara, A, Nakagawa, N, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5
To be Published
2PT5
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Crystal Structure Of Shikimate Kinase (aq_2177) From Aquifex Aeolicus vf5
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Shikimate kinase
著者Jeyakanthan, J, Nithya, N, Shimada, A, Velmurugan, D, Ebihara, A, Shinkai, A, Kuramitsu, S, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-08
公開日2008-05-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure Of Shikimate Kinase (aq_2177) From Aquifex Aeolicus vf5
To be Published
2EIS
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BU of 2eis by Molmil
X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
分子名称: COENZYME A, Hypothetical protein TTHB207
著者Kamitori, S, Yoshida, H, Satoh, S, Iino, H, Ebihara, A, Chen, L, Fu, Z.-Q, Chrzas, J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-13
公開日2008-03-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
To be Published
2QYH
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Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
分子名称: GLYCEROL, Hypothetical conserved protein, GK1056
著者Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-08-15
公開日2008-08-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
To be Published

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件を2024-11-06に公開中

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