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PDB: 2047 results

5E0Q
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BU of 5e0q by Molmil
Crystal structure of the Nup98 C-terminal domain bound to nanobody TP377
Descriptor: Anti-Nup98 Nanobody TP377, Nuclear pore complex protein Nup98-Nup96
Authors:Pleiner, T, Trakhanov, S, Goerlich, D.
Deposit date:2015-09-29
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nanobodies: site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation.
Elife, 4, 2015
3QW5
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BU of 3qw5 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RRGF
Descriptor: Botulinum neurotoxin type A, SULFATE ION, ZINC ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-26
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3ISW
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BU of 3isw by Molmil
Crystal structure of filamin-A immunoglobulin-like repeat 21 bound to an N-terminal peptide of CFTR
Descriptor: Cystic fibrosis transmembrane conductance regulator, Filamin-A
Authors:Xu, Z, Page, R, Qin, J, Ithychanda, S.S, Liu, J.M, Misra, S.
Deposit date:2009-08-27
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Biochemical basis of the interaction between cystic fibrosis transmembrane conductance regulator and immunoglobulin-like repeats of filamin.
J.Biol.Chem., 285, 2010
3QW8
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BU of 3qw8 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor CRGC
Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin type A, SODIUM ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
1G9A
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BU of 1g9a by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM BOTULINUM NEUROTOXIN B COMPLEXED WITH AN INHIBITOR (EXPERIMENT 3)
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, BOTULINUM NEUROTOXIN TYPE B, ZINC ION
Authors:Eswaramoorthy, S, Swaminathan, S.
Deposit date:2000-11-22
Release date:2002-11-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Novel Mechanism for Clostridium botulinum Neurotoxin Inhibition
BIOCHEMISTRY, 41, 2002
7YK5
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BU of 7yk5 by Molmil
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Multifunctional fusion protein, PYCO1 LSU binding motif, ...
Authors:Oh, Z.G, Ang, W.S.L, Bhushan, S, Mueller-Cajar, O.
Deposit date:2022-07-21
Release date:2023-06-21
Method:ELECTRON MICROSCOPY (2 Å)
Cite:A linker protein from a red-type pyrenoid phase separates with Rubisco via oligomerizing sticker motifs.
Proc.Natl.Acad.Sci.USA, 120, 2023
3R6A
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BU of 3r6a by Molmil
Crystal structure of an uncharacterized protein (hypothetical protein MM_3218) from Methanosarcina mazei.
Descriptor: ACETATE ION, Uncharacterized protein
Authors:Eswaramoorthy, S, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-03-21
Release date:2011-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of an uncharacterized protein (hypothetical protein MM_3218) from Methanosarcina mazei.
To be Published
7KKF
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BU of 7kkf by Molmil
Crystal Structure of S. cerevisiae Ess1
Descriptor: Peptidyl-prolyl cis-trans isomerase ESS1
Authors:Namitz, K.E.W, Alicea-Velazquez, N.L, Cosgrove, M.S, Hanes, S.D.
Deposit date:2020-10-27
Release date:2021-03-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure analysis suggests Ess1 isomerizes the carboxy-terminal domain of RNA polymerase II via a bivalent anchoring mechanism.
Commun Biol, 4, 2021
3JYI
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BU of 3jyi by Molmil
Structural and biochemical evidence that a TEM-1 {beta}-lactamase Asn170Gly active site mutant acts via substrate-assisted catalysis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase TEM, PHOSPHATE ION
Authors:Brown, N.G, Palzkill, T.G, Prasad, B.V.V, Shanker, S.
Deposit date:2009-09-21
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Structural and biochemical evidence that a TEM-1 beta-lactamase N170G active site mutant acts via substrate-assisted catalysis
J.Biol.Chem., 284, 2009
3K2G
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BU of 3k2g by Molmil
Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, MAGNESIUM ION, Resiniferatoxin-binding, ...
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-30
Release date:2009-10-13
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides
To be Published
3QDK
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BU of 3qdk by Molmil
Structural insight on mechanism and diverse substrate selection strategy of ribulokinase
Descriptor: L-ribulose, Ribulokinase
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-01-18
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural insight into mechanism and diverse substrate selection strategy of L-ribulokinase.
Proteins, 80, 2012
2Q09
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BU of 2q09 by Molmil
Crystal structure of Imidazolonepropionase from environmental sample with bound inhibitor 3-(2,5-Dioxo-imidazolidin-4-yl)-propionic acid
Descriptor: 3-[(4S)-2,5-DIOXOIMIDAZOLIDIN-4-YL]PROPANOIC ACID, FE (III) ION, Imidazolonepropionase
Authors:Tyagi, R, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-05-21
Release date:2007-06-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A common catalytic mechanism for proteins of the HutI family.
Biochemistry, 47, 2008
3K9C
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BU of 3k9c by Molmil
Crystal structure of LacI Transcriptional regulator from Rhodococcus species.
Descriptor: GLYCEROL, Transcriptional regulator, LacI family protein
Authors:Damodharan, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-15
Release date:2009-11-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of LacI Transcriptional regulator from Rhodococcus species.
To be Published
2RK9
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BU of 2rk9 by Molmil
The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01
Descriptor: Glyoxalase/bleomycin resistance protein/dioxygenase
Authors:Tyagi, R, Eswaramoorthy, S, Sauder, J.M, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-10-16
Release date:2007-10-30
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01.
To be Published
5BUW
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BU of 5buw by Molmil
Crystal Structure of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Yersinia Pestis
Descriptor: 1,2-ETHANEDIOL, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, THIOCYANATE ION
Authors:Mcgillick, B, Kumaran, D, Swaminathan, S.
Deposit date:2015-06-04
Release date:2016-06-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Yersinia Pestis
To be published
3R64
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BU of 3r64 by Molmil
Crystal structure of a NAD-dependent benzaldehyde dehydrogenase from Corynebacterium glutamicum
Descriptor: NAD dependent benzaldehyde dehydrogenase
Authors:Agarwal, R, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-03-21
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of a NAD-dependent benzaldehyde dehydrogenase from Corynebacterium glutamicum
To be Published
3R2G
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BU of 3r2g by Molmil
Crystal structure of Inosine 5' monophosphate dehydrogenase from Legionella pneumophila
Descriptor: Inosine 5'-monophosphate dehydrogenase
Authors:Agarwal, R, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-03-14
Release date:2011-04-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.941 Å)
Cite:Crystal structure of Inosine 5' monophosphate dehydrogenase from Legionella pneumophila
To be Published
1J6W
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BU of 1j6w by Molmil
CRYSTAL STRUCTURE OF HAEMOPHILUS INFLUENZAE LUXS
Descriptor: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
Authors:Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:2001-05-14
Release date:2001-06-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs.
Structure, 9, 2001
3R79
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BU of 3r79 by Molmil
Crystal structure of an uncharactertized protein from Agrobacterium tumefaciens
Descriptor: ACETATE ION, PRASEODYMIUM ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Eswaramoorthy, S, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-03-22
Release date:2011-04-06
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an uncharactertized protein from Agrobacterium tumefaciens
To be Published
4EPI
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BU of 4epi by Molmil
The crystal structure of pesticin-T4 lysozyme hybrid stabilized by engineered disulfide bonds
Descriptor: Pesticin, Lysozyme Chimera, SODIUM ION, ...
Authors:Seddiki, N, Fairman, J.W, Noinaj, N, Lukacik, P, Barnard, T, Buchanan, S.K.
Deposit date:2012-04-17
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural engineering of a phage lysin that targets Gram-negative pathogens.
Proc.Natl.Acad.Sci.USA, 109, 2012
1CQV
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BU of 1cqv by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.0
Descriptor: PROTEIN (STAPHYLOCOCCAL ENTEROTOXIN C2), ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:1999-08-11
Release date:1999-08-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1G9C
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BU of 1g9c by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM BOTULINUM NEUROTOXIN B COMPLEXED WITH AN INHIBITOR (EXPERIMENT 4)
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, BOTULINUM NEUROTOXIN TYPE B, ZINC ION
Authors:Eswaramoorthy, S, Swaminathan, S.
Deposit date:2000-11-22
Release date:2002-11-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A Novel Mechanism for Clostridium botulinum Neurotoxin Inhibition
BIOCHEMISTRY, 41, 2002
5DLQ
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BU of 5dlq by Molmil
Crystal structure of RanGTP-Exportin 4-eIF5A complex
Descriptor: Eukaryotic translation initiation factor 5A-1, Exportin-4, GTP-binding nuclear protein Ran, ...
Authors:Aksu, M, Trakhanov, S, Gorlich, D.
Deposit date:2015-09-07
Release date:2016-06-22
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the exportin Xpo4 in complex with RanGTP and the hypusine-containing translation factor eIF5A.
Nat Commun, 7, 2016
2OQH
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BU of 2oqh by Molmil
Crystal structure of an isomerase from Streptomyces coelicolor A3(2)
Descriptor: Putative isomerase, SULFATE ION
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-31
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of an isomerase from Streptomyces coelicolor
To be Published
5Z78
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BU of 5z78 by Molmil
Structure of TIRR/53BP1 complex
Descriptor: TP53-binding protein 1, Tudor-interacting repair regulator protein
Authors:Dai, Y.X, Shan, S.
Deposit date:2018-01-27
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:Structural basis for recognition of 53BP1 tandem Tudor domain by TIRR
Nat Commun, 9, 2018

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