Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 280 件

1D8K
DownloadVisualize
BU of 1d8k by Molmil
SOLUTION STRUCTURE OF THE CENTRAL CORE DOMAIN OF TFIIE BETA
分子名称: GENERAL TRANSCRIPTION FACTOR TFIIE-BETA
著者Okuda, M, Watanabe, Y, Okamura, H, Hanaoka, F, Ohkuma, Y, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-10-25
公開日2000-04-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the central core domain of TFIIEbeta with a novel double-stranded DNA-binding surface.
EMBO J., 19, 2000
5Z7H
DownloadVisualize
BU of 5z7h by Molmil
Crystal structure of CcpE regulatory domain in citrate-bound form from Staphyloccocus aureus
分子名称: CITRATE ANION, LysR family transcriptional regulator
著者Chen, J, Wang, L, Shang, F, Xu, Y.
登録日2018-01-28
公開日2018-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Citrate-responsive mechanism of catabolite control protein E from Staphyloccocus aureus
To Be Published
1D8J
DownloadVisualize
BU of 1d8j by Molmil
SOLUTION STRUCTURE OF THE CENTRAL CORE DOMAIN OF TFIIE BETA
分子名称: GENERAL TRANSCRIPTION FACTOR TFIIE-BETA
著者Okuda, M, Watanabe, Y, Okamura, H, Hanaoka, F, Ohkuma, Y, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-10-25
公開日2000-04-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the central core domain of TFIIEbeta with a novel double-stranded DNA-binding surface.
EMBO J., 19, 2000
2LT8
DownloadVisualize
BU of 2lt8 by Molmil
Eurocin solution structure
分子名称: eurocin
著者Oeemig, J.S, Lynggaard, C, Knudsen, D.H, Hansen, F.T, Noergaard, K.D, Schneider, T, Vad, B.S, Neve, S, Kristensen, H, Sahl, H, Otzen, D.E, Wimmer, R.
登録日2012-05-15
公開日2012-10-31
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Eurocin, a New Fungal Defensin: STRUCTURE, LIPID BINDING, AND ITS MODE OF ACTION.
J.Biol.Chem., 287, 2012
5ZZO
DownloadVisualize
BU of 5zzo by Molmil
Crystal structure of CcpE regulatory domain in complex with citrate from Staphyloccocus aureus
分子名称: CITRATE ANION, LysR family transcriptional regulator
著者Chen, J, Wang, L, Shang, F, Xu, Y.
登録日2018-06-04
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Biochemical Analysis of the Citrate-Responsive Mechanism of the Regulatory Domain of Catabolite Control Protein E from Staphylococcus aureus
Biochemistry, 57, 2018
2K3B
DownloadVisualize
BU of 2k3b by Molmil
Seeing the Invisible: Structures of Excited Protein States by Relaxation Dispersion NMR
分子名称: Actin-binding protein
著者Vallurupalli, P, Hansen, F.D, Kay, L.E.
登録日2008-04-30
公開日2008-07-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structures of invisible, excited protein states by relaxation dispersion NMR spectroscopy
Proc.Natl.Acad.Sci.Usa, 105, 2008
2JQR
DownloadVisualize
BU of 2jqr by Molmil
Solution model of crosslinked complex of cytochrome c and adrenodoxin
分子名称: Adrenodoxin, mitochondrial, Cytochrome c iso-1, ...
著者Xu, X, Reinle, W, Hannemann, F, Konarev, P.V, Svergun, D.I, Bernhardt, R, Ubbink, M.
登録日2007-06-07
公開日2008-04-22
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy
J.Am.Chem.Soc., 130, 2008
1WYW
DownloadVisualize
BU of 1wyw by Molmil
Crystal Structure of SUMO1-conjugated thymine DNA glycosylase
分子名称: CHLORIDE ION, G/T mismatch-specific thymine DNA glycosylase, MAGNESIUM ION, ...
著者Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M.
登録日2005-02-17
公開日2005-06-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of thymine DNA glycosylase conjugated to SUMO-1.
Nature, 435, 2005
3I9I
DownloadVisualize
BU of 3i9i by Molmil
Crystal structure of human transthyretin variant A25T - #2
分子名称: TRIETHYLENE GLYCOL, Transthyretin
著者Palmieri, L.C, Freire, J.B.B, Palhano, F.L, Azevedo, E.P.C, Foguel, D, Lima, L.M.T.R.
登録日2009-07-11
公開日2011-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of human transthyretin variant A25T - #2
To be Published
5Y9Q
DownloadVisualize
BU of 5y9q by Molmil
Crystal structure of the CcpE regulatory domain at 1.95 Angstrom from Staphylococcus aureus
分子名称: Carbon catabolite responsive regulator
著者Chen, J, Wang, L, Shang, F, Xu, Y.
登録日2017-08-27
公開日2017-09-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献Structural and Biochemical Analysis of the Citrate-Responsive Mechanism of the Regulatory Domain of Catabolite Control Protein E from Staphylococcus aureus
Biochemistry, 57, 2018
4DL2
DownloadVisualize
BU of 4dl2 by Molmil
Human DNA polymerase eta inserting dCMPNPP opposite CG template (GG0a)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*CP*GP*GP*CP*TP*CP*AP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*TP*GP*AP*G)-3'), ...
著者Zhao, Y, Biertumpfel, C, Gregory, M, Hua, Y, Hanaoka, F, Yang, W.
登録日2012-02-05
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
4DL7
DownloadVisualize
BU of 4dl7 by Molmil
Human DNA polymerase eta fails to extend primer 2 nucleotide after cisplatin crosslink (Pt-GG4).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Cisplatin, DNA (5'-D(*TP*AP*CP*TP*CP*GP*GP*TP*CP*AP*CP*T)-3'), ...
著者Zhao, Y, Biertumpfel, C, Gregory, M, Hua, Y, Hanaoka, F, Yang, W.
登録日2012-02-05
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
4DL4
DownloadVisualize
BU of 4dl4 by Molmil
Human DNA polymerase eta inserting dCMPNPP opposite the 3'G of cisplatin crosslinked Gs (Pt-GG1).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*TP*AP*GP*TP*GP*TP*GP*AP*G)-3'), ...
著者Zhao, Y, Biertumpfel, C, Gregory, M, Hua, Y.-J, Hanaoka, F, Yang, W.
登録日2012-02-05
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
4DL3
DownloadVisualize
BU of 4dl3 by Molmil
Human DNA polymerase eta inserting dCMPNPP opposite GG template (GG0b).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*TP*AP*CP*GP*GP*TP*CP*AP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*TP*GP*AP*C)-3'), ...
著者Zhao, Y, Biertumpfel, C, Gregory, M, Hua, Y, Hanaoka, F, Yang, W.
登録日2012-02-05
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
4DL6
DownloadVisualize
BU of 4dl6 by Molmil
Human DNA polymerase eta extending primer immediately after cisplatin crosslink (Pt-GG3).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, Cisplatin, DNA (5'-D(*TP*AP*GP*TP*GP*TP*GP*CP*C)-3'), ...
著者Zhao, Y, Biertumpfel, C, Gregory, M, Hua, Y, Hanaoka, F, Yang, W.
登録日2012-02-05
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
1XFP
DownloadVisualize
BU of 1xfp by Molmil
Crystal structure of the CDR2 germline reversion mutant of cAb-Lys3 in complex with hen egg white lysozyme
分子名称: FORMIC ACID, Lysozyme C, heavy chain antibody
著者De Genst, E, Handelberg, F, Van Meirhaeghe, A, Vynck, S, Loris, R, Wyns, L, Muyldermans, S.
登録日2004-09-15
公開日2004-09-28
最終更新日2013-02-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Chemical Basis for the Affinity Maturation of a Camel Single Domain Antibody
J.Biol.Chem., 279, 2004
4DL5
DownloadVisualize
BU of 4dl5 by Molmil
Human DNA polymerase eta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*TP*AP*CP*GP*GP*TP*CP*AP*CP*AP*CP*T)-3'), ...
著者Zhao, Y, Biertumpfel, C, Gregory, M, Hanaoka, F, Hua, Y, Yang, W.
登録日2012-02-05
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta
Proc.Natl.Acad.Sci.USA, 109, 2012
5Z72
DownloadVisualize
BU of 5z72 by Molmil
Crystal structure of CcpC regulatory domain in complex with citrate from Bacillus amyloliquefaciens
分子名称: CITRATE ANION, CcpC, SODIUM ION
著者Chen, J, Wang, L, Shang, F, Xu, Y.
登録日2018-01-26
公開日2018-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanistic insights from the crystal structures of a catabolite control protein C on citrate-responsive mechanism
To Be Published
2A6S
DownloadVisualize
BU of 2a6s by Molmil
Crystal structure of YoeB under isopropanol condition
分子名称: ISOPROPYL ALCOHOL, Toxin yoeB
著者Kamada, K, Hanaoka, F.
登録日2005-07-04
公開日2005-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Conformational Change in the Catalytic Site of the Ribonuclease YoeB Toxin by YefM Antitoxin
Mol.Cell, 19, 2005
2A6Q
DownloadVisualize
BU of 2a6q by Molmil
Crystal structure of YefM-YoeB complex
分子名称: Antitoxin yefM, Toxin yoeB
著者Kamada, K, Hanaoka, F.
登録日2005-07-04
公開日2005-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational Change in the Catalytic Site of the Ribonuclease YoeB Toxin by YefM Antitoxin
Mol.Cell, 19, 2005
2A6R
DownloadVisualize
BU of 2a6r by Molmil
Crystal structure of YoeB under PEG condition
分子名称: MAGNESIUM ION, Toxin yoeB
著者Kamada, K, Hanaoka, F.
登録日2005-07-04
公開日2005-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Conformational Change in the Catalytic Site of the Ribonuclease YoeB Toxin by YefM Antitoxin
Mol.Cell, 19, 2005
2D07
DownloadVisualize
BU of 2d07 by Molmil
Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase
分子名称: G/T mismatch-specific thymine DNA glycosylase, Ubiquitin-like protein SMT3B
著者Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M.
登録日2005-07-26
公開日2006-06-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase
J.Mol.Biol., 359, 2006
6IFA
DownloadVisualize
BU of 6ifa by Molmil
Structure of beta-trefoil lectin from Entamoeba histolytica
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, lectin
著者Suguna, K, Khan, F.
登録日2018-09-19
公開日2019-09-25
最終更新日2020-04-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of a beta-trefoil lectin from Entamoeba histolytica in monomeric and a novel disulphide bond-mediated dimeric forms.
Glycobiology, 2020
1UB4
DownloadVisualize
BU of 1ub4 by Molmil
crystal structure of MazEF complex
分子名称: MazE protein, MazF protein
著者Kamada, K, Hanaoka, F, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-03-28
公開日2003-05-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the MazE/MazF Complex. Molecular Bases of Antidote-Toxin Recognition
Mol.Cell, 11, 2003
7VT1
DownloadVisualize
BU of 7vt1 by Molmil
Acyltransferase from the 9th Module of Salinomycin Polyketide Synthase
分子名称: Type I modular polyketide synthase
著者Feng, Y, Zhang, F, Zheng, J.
登録日2021-10-27
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural visualization of transient interactions between the cis-acting acyltransferase and acyl carrier protein of the salinomycin modular polyketide synthase.
Acta Crystallogr D Struct Biol, 78, 2022

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon