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PDB: 396 results

5ZIX
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BU of 5zix by Molmil
Crystal structure of Ketopantoate reductase from Pseudomonas aeruginosa bound to NADP+
Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Probable 2-dehydropantoate 2-reductase
Authors:Khanppnavar, B, Datta, S.
Deposit date:2018-03-17
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Genome-wide survey and crystallographic analysis suggests a role for both horizontal gene transfer and duplication in pantothenate biosynthesis pathways.
Biochim Biophys Acta Gen Subj, 1863, 2019
6K1R
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BU of 6k1r by Molmil
Crystal structure of Ketopantoate reductase from Pseudomonas aeruginosa in complex with NAD+ and ketopantoate
Descriptor: GLYCEROL, KETOPANTOATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Khanppnavar, B, Choudhury, A, Datta, S.
Deposit date:2019-05-12
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystallographic and biophysical analyses of Pseudomonas aeruginosa ketopantoate reductase: Implications of ligand induced conformational changes in cofactor recognition.
Biochimie, 2021
7OEC
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BU of 7oec by Molmil
Crystal structure of an intein from a hyperthermophile
Descriptor: DI(HYDROXYETHYL)ETHER, DNA polymerase II large subunit, SULFATE ION, ...
Authors:Hannes, B, Hiltunen, M, Iwai, H.
Deposit date:2021-05-03
Release date:2021-05-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Mini-Intein Structures from Extremophiles Suggest a Strategy for Finding Novel Robust Inteins.
Microorganisms, 9, 2021
6LRZ
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BU of 6lrz by Molmil
Crystal structure of Keap1 in complex with dimethyl fumarate (DMF)
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, ACETATE ION, Keap1-DC, ...
Authors:Padmanabhan, B, Unni, S, Deshmukh, P.
Deposit date:2020-01-16
Release date:2020-08-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural insights into the multiple binding modes of Dimethyl Fumarate (DMF) and its analogs to the Kelch domain of Keap1.
Febs J., 288, 2021
6BI6
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BU of 6bi6 by Molmil
Solution NMR structure of uncharacterized protein YejG
Descriptor: Uncharacterized protein YejG
Authors:Mohanty, B, Finn, T.J, Macindoe, I, Zhong, J, Patrick, W.M, Mackay, J.P.
Deposit date:2017-11-01
Release date:2018-11-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The uncharacterized bacterial protein YejG has the same architecture as domain III of elongation factor G.
Proteins, 87, 2019
2KA0
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BU of 2ka0 by Molmil
NMR structure of the protein TM1367
Descriptor: uncharacterized protein TM1367
Authors:Mohanty, B, Pedrini, B, Serrano, P, Geralt, M, Horst, R, Herrmann, T, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-27
Release date:2009-01-13
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Comparison of NMR and crystal structures for the proteins TM1112 and TM1367.
Acta Crystallogr.,Sect.F, 66, 2010
6JKE
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BU of 6jke by Molmil
Discovery and the crystal structure of NS5 in complex with the N-terminal bromodomain of BRD2.
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 7-chloranyl-2-[(3-chlorophenyl)amino]pyrano[3,4-e][1,3]oxazine-4,5-dione, Bromodomain-containing protein 2, ...
Authors:Padmanabhan, B, Mathur, S, Deshmukh, P.
Deposit date:2019-02-28
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Novel pyrano 1,3 oxazine based ligand inhibits the epigenetic reader hBRD2 in glioblastoma.
Biochem.J., 477, 2020
2K9Z
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BU of 2k9z by Molmil
NMR structure of the protein TM1112
Descriptor: uncharacterized protein TM1112
Authors:Mohanty, B, Pedrini, B, Serrano, P, Geralt, M, Horst, R, Herrmann, T, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-28
Release date:2008-11-25
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Comparison of NMR and crystal structures for the proteins TM1112 and TM1367.
Acta Crystallogr.,Sect.F, 66, 2010
2DWW
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BU of 2dww by Molmil
Crystal structure of Bromodomain-containing protein 4
Descriptor: Bromodomain-containing protein 4, CHLORIDE ION
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-21
Release date:2007-08-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Bromodomain-containing protein 4
To be Published
2DYH
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BU of 2dyh by Molmil
Crystal structure of the Keap1 protein in complexed with the N-terminal region of the Nrf2 transcription factor
Descriptor: Kelch-like ECH-associated protein 1, Nrf2/Neh2 peptide from Nuclear factor erythroid 2-related factor 2, SULFATE ION
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-14
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Different electrostatic potentials define ETGE and DLG motifs as hinge and latch in oxidative stress response
Mol.Cell.Biol., 27, 2007
7VYX
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BU of 7vyx by Molmil
Crystal structure of the selenomethionine(SeMet)-derived Cas12c1 (D969A) ternary complex
Descriptor: Non-target DNA strand, Selenomethionine (SeMet)-labeled Cas12c1 D969A mutant, Target DNA strand, ...
Authors:Zhang, B, Lin, J.Y, Perculija, V, OuYang, S.Y.
Deposit date:2021-11-15
Release date:2022-11-02
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into target DNA recognition and cleavage by the CRISPR-Cas12c1 system
Nucleic Acids Res., 50, 2022
7WNX
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BU of 7wnx by Molmil
Cryo-EM structure of Mycobacterium smegmatis MmpL3 complexed with ST004 in lipid nanodiscs
Descriptor: N-[2-(2-adamantylamino)ethyl]-1-[2,4-bis(fluoranyl)phenyl]-5-(4-chlorophenyl)-4-methyl-pyrazole-3-carboxamide, Trehalose monomycolate exporter MmpL3
Authors:Zhang, B, Hu, T, Yang, X, Liu, F, Rao, Z.
Deposit date:2022-01-20
Release date:2022-08-03
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure-based design of anti-mycobacterial drug leads that target the mycolic acid transporter MmpL3.
Structure, 30, 2022
2DZE
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BU of 2dze by Molmil
Crystal structure of histone chaperone Asf1 in complex with a C-terminus of histone H3
Descriptor: 10-mer peptide from Histone H3.1/H3.2, Histone chaperone cia1, TRIETHYLENE GLYCOL
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-28
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of histone chaperone Asf1 in complex with a C-terminus of histone H3
To be Published
7WIX
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BU of 7wix by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Mycobactin import ATP-binding/permease protein IrtA, ...
Authors:Zhang, B, Sun, S, Yang, H, Rao, Z.
Deposit date:2022-01-05
Release date:2023-01-25
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WIV
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BU of 7wiv by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with an AMP-PNP
Descriptor: Mycobactin import ATP-binding/permease protein IrtA, Mycobactin import ATP-binding/permease protein IrtB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Zhang, B, Sun, S, Yang, H, Rao, Z.
Deposit date:2022-01-05
Release date:2023-01-25
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WIU
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BU of 7wiu by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in inward-facing state
Descriptor: Mycobactin import ATP-binding/permease protein IrtA, Mycobactin import ATP-binding/permease protein IrtB
Authors:Zhang, B, Sun, S, Yang, H, Rao, Z.
Deposit date:2022-01-05
Release date:2023-01-25
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WIW
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BU of 7wiw by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB complexed with ATP in an occluded conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mycobactin import ATP-binding/permease protein IrtA, ...
Authors:Zhang, B, Sun, S, Yang, H, Rao, Z.
Deposit date:2022-01-05
Release date:2023-01-25
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
2CU9
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BU of 2cu9 by Molmil
Crystal structure of Histone chaperone cia1
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, Histone chaperone cia1
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-25
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Fission Yeast Histone Chaperone Asf1 Complexed with the Hip1 B-domain or the Cac2 C Terminus
J.Biol.Chem., 283, 2008
2DVV
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BU of 2dvv by Molmil
Crystal structure of the second bromodomain of the human Brd2 protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bromodomain-containing protein 2
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the second bromodomain of the human Brd2 protein
To be Published
2DWZ
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BU of 2dwz by Molmil
Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
Descriptor: 26S protease regulatory subunit 6B, 26S proteasome non-ATPase regulatory subunit 10, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-22
Release date:2007-08-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
To be Published
2DX8
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BU of 2dx8 by Molmil
Crystal Structure Analysis of the PHD domain of the Transcription Coactivator Pygophus
Descriptor: Pygopus homolog 1, ZINC ION
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-24
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure Analysis of the PHD Domain of the Transcription Coactivator Pygopus
To be Published
2E3K
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BU of 2e3k by Molmil
Crystal structure of the human Brd2 second bromodomain in complexed with the acetylated histone H4 peptide
Descriptor: 15-mer peptide from Histone H4, Bromodomain-containing protein 2
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-11-27
Release date:2007-12-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for diacetylated histone H4 tail recognition by the second bromodomain of human BRD2
To be Published
2KL4
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BU of 2kl4 by Molmil
NMR structure of the protein NB7804A
Descriptor: BH2032 protein
Authors:Mohanty, B, Geralt, M, Augustyniak, W, Serrano, P, Horst, R, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-30
Release date:2009-07-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the protein NB7804A from Bacillus Halodurans
To be Published
2KZC
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BU of 2kzc by Molmil
Solution NMR structure of the protein YP_510488.1
Descriptor: Uncharacterized protein
Authors:Mohanty, B, Serrano, P, Geralt, M, Horst, R, Wilson, I.A, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-15
Release date:2010-07-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of the protein YP_510488.1
To be Published
4IMA
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BU of 4ima by Molmil
The structure of C436M-hLPYK in complex with Citrate/Mn/ATP/Fru-1,6-BP
Descriptor: 1,2-ETHANEDIOL, 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE, ...
Authors:Zhang, B, Holyoak, T, Fenton, A.W, Tang, Q.L, Prasannan, C.B, Deng, J.P.
Deposit date:2013-01-02
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Energetic Coupling between an Oxidizable Cysteine and the Phosphorylatable N-Terminus of Human Liver Pyruvate Kinase.
Biochemistry, 52, 2013

222036

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