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PDB: 87 results

1AT0
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BU of 1at0 by Molmil
17-kDA fragment of hedgehog C-terminal autoprocessing domain
Descriptor: 17-HEDGEHOG
Authors:Hall, T.M.T, Porter, J.A, Young, K.E, Koonin, E.V, Beachy, P.A, Leahy, D.J.
Deposit date:1997-08-15
Release date:1997-11-12
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a Hedgehog autoprocessing domain: homology between Hedgehog and self-splicing proteins.
Cell(Cambridge,Mass.), 91, 1997
1VHH
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BU of 1vhh by Molmil
A POTENTIAL CATALYTIC SITE WITHIN THE AMINO-TERMINAL SIGNALLING DOMAIN OF SONIC HEDGEHOG
Descriptor: SONIC HEDGEHOG, SULFATE ION, ZINC ION
Authors:Hall, T.M.T, Porter, J.A, Beachy, P.A, Leahy, D.J.
Deposit date:1995-10-03
Release date:1996-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A potential catalytic site revealed by the 1.7-A crystal structure of the amino-terminal signalling domain of Sonic hedgehog.
Nature, 378, 1995
4WZW
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BU of 4wzw by Molmil
Crystal structure of human Puf-A in complex with DNA
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), Pumilio domain-containing protein KIAA0020
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2014-11-20
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9516 Å)
Cite:A divergent Pumilio repeat protein family for pre-rRNA processing and mRNA localization.
Proc.Natl.Acad.Sci.USA, 111, 2014
3V74
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BU of 3v74 by Molmil
crystal structure of FBF-2 in complex with gld-1 FBEa13 RNA
Descriptor: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*CP*AP*UP*GP*UP*GP*CP*CP*AP*UP*AP*C)-3')
Authors:Wang, Y, Qiu, C, Kershner, A, Holley, C.P, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
Deposit date:2011-12-20
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
6NOF
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BU of 6nof by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y, Q367S) in complex with 8-nt RNA
Descriptor: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
Authors:McCann, K.L, Wang, Y, Qiu, C, Hall, T.M.T.
Deposit date:2019-01-16
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
6NWW
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BU of 6nww by Molmil
Crystal structure of the RRM domain of S. pombe Puf1 in the P212121 space group
Descriptor: CHLORIDE ION, Pumilio domain-containing protein C56F2.08c
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2019-02-07
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6NX5
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BU of 6nx5 by Molmil
Crystal structure of the RRM domain of S. pombe Puf1 in the P21 space group
Descriptor: 1,2-ETHANEDIOL, Pumilio domain-containing protein C56F2.08c
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2019-02-08
Release date:2019-07-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6NY5
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BU of 6ny5 by Molmil
Crystal structure of the PUM-HD domain of S. pombe Puf1 in complex with RNA
Descriptor: MAGNESIUM ION, Pumilio domain-containing protein C56F2.08c, RNA (5'-R(P*UP*UP*AP*AP*UP*AP*AP*CP*UP*UP*AP*AP*U)-3'), ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2019-02-11
Release date:2019-07-03
Last modified:2020-01-15
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Nucleic Acids Res., 47, 2019
6WPI
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BU of 6wpi by Molmil
Crystal structure of Nop9 in complex with ITS1 RNA
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, GLYCEROL, Nucleolar protein 9, ...
Authors:Zhang, J, Qiu, C, Hall, T.M.T.
Deposit date:2020-04-27
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Nop9 recognizes structured and single-stranded RNA elements of preribosomal RNA.
Rna, 26, 2020
6NOD
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BU of 6nod by Molmil
Crystal structure of C. elegans PUF-8 in complex with RNA
Descriptor: PUF (Pumilio/FBF) domain-containing, RNA (5'-R(P*UP*GP*UP*AP*UP*AP*UP*A)-3')
Authors:Wang, Y, McCann, K.L, Qiu, C, Hall, T.M.T.
Deposit date:2019-01-16
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.547 Å)
Cite:Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
6NOC
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BU of 6noc by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y) in complex with 8-nt RNA
Descriptor: Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
Authors:McCann, K, Wang, Y, Qiu, C, Hall, T.M.T.
Deposit date:2019-01-16
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.849 Å)
Cite:Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
6NOH
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BU of 6noh by Molmil
Crystal structure of FBF-2 repeat 5 mutant (C363S, R364Y, Q367S) in complex with 8-nt RNA
Descriptor: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')
Authors:McCann, K.L, Wang, Y, Qiu, C, Hall, T.M.T.
Deposit date:2019-01-16
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Engineering a conserved RNA regulatory protein repurposes its biological function in vivo .
Elife, 8, 2019
4WZR
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BU of 4wzr by Molmil
Crystal structure of human Puf-A
Descriptor: GLYCEROL, Pumilio domain-containing protein KIAA0020
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2014-11-20
Release date:2014-12-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:A divergent Pumilio repeat protein family for pre-rRNA processing and mRNA localization.
Proc.Natl.Acad.Sci.USA, 111, 2014
2AB5
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BU of 2ab5 by Molmil
bI3 LAGLIDADG Maturase
Descriptor: SULFATE ION, mRNA maturase
Authors:Longo, A, Leonard, C.W, Bassi, G.S, Berndt, D, Krahn, J.M, Hall, T.M, Weeks, K.M.
Deposit date:2005-07-14
Release date:2005-08-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Evolution from DNA to RNA recognition by the bI3 LAGLIDADG maturase
Nat.Struct.Mol.Biol., 12, 2005
5BYM
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BU of 5bym by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA
Descriptor: RNA (5'-R(*UP*GP*UP*AP*CP*UP*AP*UP*A)-3'), Suppressor protein MPT5
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-10
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.708 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
5BZU
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BU of 5bzu by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to AAT2 RNA
Descriptor: Suppressor protein MPT5, UGUAAUA
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-11
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
5BZ1
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BU of 5bz1 by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to MFA2 RNA
Descriptor: RNA (5'-R(*UP*GP*UP*AP*UP*UP*UP*GP*UP*A)-3'), Suppressor protein MPT5
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-11
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
5BZ5
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BU of 5bz5 by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to AMN1 RNA
Descriptor: RNA (5'-R(*UP*GP*UP*AP*AP*CP*UP*UP*UP*A)-3'), Suppressor protein MPT5
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-11
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
5BZV
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BU of 5bzv by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA
Descriptor: RNA (5'-R(*UP*GP*UP*AP*CP*UP*AP*UP*A)-3'), Suppressor protein MPT5
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-11
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.354 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
6PUN
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BU of 6pun by Molmil
Crystal structure of a ternary complex of FBF-2 with LST-1 (site B) and compact FBE RNA
Descriptor: 1,2-ETHANEDIOL, Fem-3 mRNA-binding factor 2, GLYCEROL, ...
Authors:Qiu, C, Campbell, Z.T, Hall, T.M.T.
Deposit date:2019-07-18
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:A crystal structure of a collaborative RNA regulatory complex reveals mechanisms to refine target specificity.
Elife, 8, 2019
6LVR
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BU of 6lvr by Molmil
Crystal structure of the PPR domain of Arabidopsis thaliana protein-only RNase P 1 (PRORP1) in complex with tRNA
Descriptor: Proteinaceous RNase P 1, chloroplastic/mitochondrial, yeast phenylalanine tRNA
Authors:Teramoto, T, Hall, T.M.T.
Deposit date:2020-02-04
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Pentatricopeptide repeats of protein-only RNase P use a distinct mode to recognize conserved bases and structural elements of pre-tRNA.
Nucleic Acids Res., 48, 2020
5KL1
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BU of 5kl1 by Molmil
Crystal structure of the Pumilio-Nos-hunchback RNA complex
Descriptor: Maternal protein pumilio, Protein nanos, RNA (5'-R(*AP*AP*AP*UP*UP*GP*UP*AP*CP*AP*UP*A)-3'), ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2016-06-23
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.701 Å)
Cite:Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
5KL8
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BU of 5kl8 by Molmil
Crystal structure of the Pumilio-Nos-CyclinB RNA complex
Descriptor: Maternal protein pumilio, Protein nanos, RNA (5'-R(*UP*AP*UP*UP*UP*GP*UP*AP*AP*UP*U)-3'), ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2016-06-23
Release date:2016-08-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (4 Å)
Cite:Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
5KLA
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BU of 5kla by Molmil
Crystal structure of the drosophila Pumilio RNA-binding domain in complex with hunchback RNA
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Maternal protein pumilio, ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2016-06-23
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
1FXL
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BU of 1fxl by Molmil
CRYSTAL STRUCTURE OF HUD AND AU-RICH ELEMENT OF THE C-FOS RNA
Descriptor: 5'-R(P*UP*UP*UP*UP*AP*UP*UP*UP*U)-3', PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD
Authors:Wang, X, Hall, T.M.T.
Deposit date:2000-09-26
Release date:2001-02-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for recognition of AU-rich element RNA by the HuD protein.
Nat.Struct.Biol., 8, 2001

 

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數據於2024-07-03公開中

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