Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 494 件

8CLR
DownloadVisualize
BU of 8clr by Molmil
Integrated NMR/MD structure determination of a dynamic and thermodynamically stable CUUG RNA tetraloop
分子名称: RNA hairpin with CUUG tetraloop
著者Oxenfarth, A, Kuemmerer, F, Bottaro, S, Schnieders, R, Pinter, G, Jonker, H.R.A, Fuertig, B, Richter, C, Blackledge, M, Lindorff-Larsen, K, Schwalbe, H.
登録日2023-02-17
公開日2023-07-19
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Integrated NMR/Molecular Dynamics Determination of the Ensemble Conformation of a Thermodynamically Stable CUUG RNA Tetraloop.
J.Am.Chem.Soc., 145, 2023
6DQI
DownloadVisualize
BU of 6dqi by Molmil
Crystal structure of SsuE FMN reductase Y118A mutant in apo form.
分子名称: FMN reductase (NADPH), SULFATE ION
著者McFarlane, J.S, Ellis, H.R, Lamb, A.L.
登録日2018-06-11
公開日2019-01-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Not as easy as pi : An insertional residue does not explain the pi-helix gain-of-function in two-component FMN reductases.
Protein Sci., 28, 2019
8CA4
DownloadVisualize
BU of 8ca4 by Molmil
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2 N-domain).
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J.
登録日2023-01-24
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse.
Embo J., 43, 2024
8CA5
DownloadVisualize
BU of 8ca5 by Molmil
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 3).
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J.
登録日2023-01-24
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse.
Embo J., 43, 2024
8C2S
DownloadVisualize
BU of 8c2s by Molmil
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 1).
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J.
登録日2022-12-22
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse.
Embo J., 43, 2024
8CA3
DownloadVisualize
BU of 8ca3 by Molmil
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2).
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J.
登録日2023-01-24
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse.
Embo J., 43, 2024
8CA1
DownloadVisualize
BU of 8ca1 by Molmil
Cryo-EM structure of the ACADVL dimer from Mus musculus.
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
著者Yin, Z, Bridges, H.R, Agip, A.N.A, Hirst, J.
登録日2023-01-24
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse.
Embo J., 43, 2024
6DK1
DownloadVisualize
BU of 6dk1 by Molmil
Human sigma-1 receptor bound to (+)-pentazocine
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S,6S,11S)-6,11-dimethyl-3-(3-methylbut-2-en-1-yl)-1,2,3,4,5,6-hexahydro-2,6-methano-3-benzazocin-8-ol, GLYCEROL, ...
著者Schmidt, H.R, Kruse, A.C.
登録日2018-05-28
公開日2018-10-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Structural basis for sigma1receptor ligand recognition.
Nat. Struct. Mol. Biol., 25, 2018
6F27
DownloadVisualize
BU of 6f27 by Molmil
NMR solution structure of non-bound [des-Arg10]-kallidin (DAKD)
分子名称: DAKD
著者Richter, C, Jonker, H.R.A, Schwalbe, H, Joedicke, L, Mao, J, Kuenze, G, Reinhart, C, Kalavacherla, T, Meiler, J, Preu, J, Michel, H, Glaubitz, C.
登録日2017-11-23
公開日2018-01-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The molecular basis of subtype selectivity of human kinin G-protein-coupled receptors.
Nat. Chem. Biol., 14, 2018
8JAJ
DownloadVisualize
BU of 8jaj by Molmil
In situ structures of the ultra-long contracted tail of Myoviridae phage P1
分子名称: Gp22
著者Zhou, J.Q, Liu, H.R.
登録日2023-05-06
公開日2023-06-21
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献In Situ Structures of the Ultra-Long Extended and Contracted Tail of Myoviridae Phage P1.
Viruses, 15, 2023
8JAN
DownloadVisualize
BU of 8jan by Molmil
In situ structures of the ultra-long extended tail of Myoviridae phage P1
分子名称: BplB, Gp22, Gp24
著者Zhou, J.Q, Liu, H.R.
登録日2023-05-06
公開日2023-06-21
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献In Situ Structures of the Ultra-Long Extended and Contracted Tail of Myoviridae Phage P1.
Viruses, 15, 2023
6F2X
DownloadVisualize
BU of 6f2x by Molmil
Structural characterization of the Mycobacterium tuberculosis Protein Tyrosine Kinase A (PtkA)
分子名称: Protein Tyrosine Kinase A
著者Niesteruk, A, Jonker, H.R.A, Sreeramulu, S, Richter, C, Hutchison, M, Linhard, V, Schwalbe, H.
登録日2017-11-27
公開日2018-07-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The domain architecture of PtkA, the first tyrosine kinase fromMycobacterium tuberculosis, differs from the conventional kinase architecture.
J. Biol. Chem., 293, 2018
5YI5
DownloadVisualize
BU of 5yi5 by Molmil
human ferritin mutant - E-helix deletion
分子名称: Ferritin heavy chain
著者Lee, S.G, Yoon, H.R, Ahn, B.J, Jeong, H, Hyun, J, Jung, Y, Kim, H.
登録日2017-10-02
公開日2018-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Four-fold Channel-Nicked Human Ferritin Nanocages for Active Drug Loading and pH-Responsive Drug Release
Angew. Chem. Int. Ed. Engl., 57, 2018
5YL8
DownloadVisualize
BU of 5yl8 by Molmil
The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
分子名称: Peptidyl-tRNA hydrolase, SODIUM ION
著者Bairagya, H.R, Sharma, P, Iqbal, N, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
登録日2017-10-17
公開日2017-11-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
To Be Published
1U2U
DownloadVisualize
BU of 1u2u by Molmil
Nmr solution structure of a designed heterodimeric leucine zipper
分子名称: General control protein GCN4
著者Marti, D.N, Bosshard, H.R.
登録日2004-07-20
公開日2004-10-05
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Inverse electrostatic effect: electrostatic repulsion in the unfolded state stabilizes a leucine zipper.
Biochemistry, 43, 2004
5YRR
DownloadVisualize
BU of 5yrr by Molmil
The crystal structure of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Coenzyme A at 2.88 A resolution
分子名称: COENZYME A, Phosphopantetheine adenylyltransferase, SULFATE ION
著者Bairagya, H.R, Gupta, A, Iqbal, N, Kaur, P, Sharma, S, Singh, T.P.
登録日2017-11-09
公開日2017-11-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献The crystal structure of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Coenzyme A at 2.88 A resolution
To Be Published
1TXE
DownloadVisualize
BU of 1txe by Molmil
Solution structure of the active-centre mutant Ile14Ala of the histidine-containing phosphocarrier protein (HPr) from Staphylococcus carnosus
分子名称: Phosphocarrier protein HPr
著者Moeglich, A, Koch, B, Hengstenberg, W, Brunner, E, Kalbitzer, H.R, Structural Proteomics in Europe (SPINE)
登録日2004-07-04
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the active-centre mutant I14A of the histidine-containing phosphocarrier protein from Staphylococcus carnosus
Eur.J.Biochem., 271, 2004
5ZZ8
DownloadVisualize
BU of 5zz8 by Molmil
Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component
分子名称: Major capsid protein, UL17, UL25, ...
著者Wang, J.L, Yuan, S, Zhu, D.J, Tang, H, Wang, N, Chen, W.Y, Gao, Q, Li, Y.H, Wang, J.Z, Liu, H.R, Zhang, X.Z, Rao, Z.H, Wang, X.X.
登録日2018-05-31
公開日2018-10-10
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component.
Nat Commun, 9, 2018
6A89
DownloadVisualize
BU of 6a89 by Molmil
Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
分子名称: 1,2-ETHANEDIOL, 2,6-DIAMINOPIMELIC ACID, GLYCEROL, ...
著者Bairagya, H.R, Shokeen, A, Sharma, P, Singh, P.K, Sharma, S, Singh, T.P.
登録日2018-07-06
公開日2018-07-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
To Be Published
5ZZV
DownloadVisualize
BU of 5zzv by Molmil
Crystal structure of PEG-1500 crystallized Peptidyl-tRNA Hydrolase from Acinetobacter baumannii at 1.5 A resolution
分子名称: 1,2-ETHANEDIOL, Peptidyl-tRNA hydrolase
著者Bairagya, H.R, Sharma, P, Iqbal, N, Sharma, S, Singh, T.P.
登録日2018-06-04
公開日2018-06-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal structure of PEG-1500 crystallized Peptidyl-tRNA Hydrolase from Acinetobacter baumannii at 1.5 A resolution
To Be Published
6ADQ
DownloadVisualize
BU of 6adq by Molmil
Respiratory Complex CIII2CIV2SOD2 from Mycobacterium smegmatis
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Gong, H.R, Xu, A, Gao, R.G, Ji, W.X, Wang, S.H, Wang, Q, Li, J, Rao, Z.H.
登録日2018-08-01
公開日2018-11-14
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献An electron transfer path connects subunits of a mycobacterial respiratory supercomplex.
Science, 362, 2018
6AKS
DownloadVisualize
BU of 6aks by Molmil
Cryo-EM structure of CVA10 mature virus
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Zhu, L, Sun, Y, Fan, J.Y, Zhu, B, Cao, L, Gao, Q, Zhang, Y.J, Liu, H.R, Rao, Z.H, Wang, X.X.
登録日2018-09-03
公開日2019-01-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures of Coxsackievirus A10 unveil the molecular mechanisms of receptor binding and viral uncoating.
Nat Commun, 9, 2018
7A8W
DownloadVisualize
BU of 7a8w by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikC with an engineered HMA domain of Pikp-1 from rice (Oryza sativa)
分子名称: NBS-LRR class disease resistance protein, Uncharacterized protein
著者Maidment, J.H.R, De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
登録日2020-08-31
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface.
Plos Pathog., 17, 2021
6AKT
DownloadVisualize
BU of 6akt by Molmil
Cryo-EM structure of CVA10 A-particle
分子名称: VP1, VP2, VP3
著者Zhu, L, Sun, Y, Fan, J.Y, Zhu, B, Cao, L, Gao, Q, Zhang, Y.J, Liu, H.R, Rao, Z.H, Wang, X.X.
登録日2018-09-03
公開日2019-01-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of Coxsackievirus A10 unveil the molecular mechanisms of receptor binding and viral uncoating.
Nat Commun, 9, 2018
6ZTQ
DownloadVisualize
BU of 6ztq by Molmil
Cryo-EM structure of respiratory complex I from Mus musculus inhibited by piericidin A at 3.0 A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Bridges, H.R, Blaza, J.N, Agip, A.N.A, Hirst, J.
登録日2020-07-20
公開日2020-10-21
最終更新日2020-10-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of inhibitor-bound mammalian complex I.
Nat Commun, 11, 2020

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon