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PDB: 42 results

6BEK
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BU of 6bek by Molmil
Structure of sIHF bound to an 8bp palindromic DNA
Descriptor: DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3'), POTASSIUM ION, SCO1480
Authors:Guarne, A, Nanji, T.N, Shen, Y.
Deposit date:2017-10-25
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Streptomyces IHF uses multiple interfaces to bind DNA.
Biochim Biophys Acta Gen Subj, 1863, 2019
3U5V
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BU of 3u5v by Molmil
Crystal structure of Max-E47
Descriptor: NITRATE ION, Protein max, Transcription factor E2-alpha chimera
Authors:Guarne, A, Ahmadpour, F, Gloyd, M.
Deposit date:2011-10-11
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the minimalist max-e47 protein chimera.
Plos One, 7, 2012
3KDK
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BU of 3kdk by Molmil
Structure of the C-terminal domain of Bacillus subtilis MutL bound to Zn2+
Descriptor: DNA mismatch repair protein mutL, ZINC ION
Authors:Guarne, A, Pillon, M.C.
Deposit date:2009-10-23
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
3KDG
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BU of 3kdg by Molmil
C-terminal domain of Bacillus subtilis MutL crystal form II
Descriptor: DNA mismatch repair protein mutL
Authors:Guarne, A, Pillon, M.C.
Deposit date:2009-10-22
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
4ITQ
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BU of 4itq by Molmil
Crystal structure of hypothetical protein SCO1480 bound to DNA
Descriptor: 5'-D(P*CP*CP*GP*CP*GP*CP*GP*C)-3', 5'-D(P*GP*CP*GP*CP*GP*CP*GP*G)-3', Putative uncharacterized protein SCO1480
Authors:Guarne, A, Nanji, T, Gloyd, M, Swiercz, J.P, Elliot, M.A.
Deposit date:2013-01-18
Release date:2013-03-27
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A novel nucleoid-associated protein specific to the actinobacteria.
Nucleic Acids Res., 41, 2013
3GAB
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BU of 3gab by Molmil
C-terminal domain of Bacillus subtilis MutL crystal form I
Descriptor: DNA mismatch repair protein mutL
Authors:Guarne, A, Pillon, M.C, Lorenowicz, J.J, Mitchell, R.R, Chung, Y.S, Friedhoff, P.
Deposit date:2009-02-17
Release date:2010-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the endonuclease domain of MutL: unlicensed to cut.
Mol.Cell, 39, 2010
1LRR
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BU of 1lrr by Molmil
CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
Descriptor: 5'-D(*AP*GP*TP*CP*GP*(6MA)P*TP*CP*GP*GP*TP*G)-3', 5'-D(*CP*AP*CP*CP*GP*AP*TP*CP*GP*AP*CP*T)-3', SeqA protein
Authors:Guarne, A, Zhao, Q, Guirlando, R, Yang, W.
Deposit date:2002-05-15
Release date:2002-12-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Insights into negative modulation of E. coli replication initiation from the structure of SeqA-hemimethylated DNA complex
NAT.STRUCT.BIOL., 9, 2002
6E8E
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BU of 6e8e by Molmil
Crystal structure of the Escherichia coli sliding clamp-MutL complex.
Descriptor: Beta sliding clamp,DNA mismatch repair protein MutL, GLYCEROL, SULFATE ION
Authors:Guarne, A, Almawi, A.W.
Deposit date:2018-07-28
Release date:2019-05-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Binding of the regulatory domain of MutL to the sliding beta-clamp is species specific.
Nucleic Acids Res., 47, 2019
6E8D
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BU of 6e8d by Molmil
Crystal structure of the Bacillus subtilis sliding clamp-MutL complex.
Descriptor: Beta sliding clamp,DNA mismatch repair protein MutL, GLYCEROL
Authors:Guarne, A, Almawi, A.W.
Deposit date:2018-07-28
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Binding of the regulatory domain of MutL to the sliding beta-clamp is species specific.
Nucleic Acids Res., 47, 2019
1QOL
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BU of 1qol by Molmil
STRUCTURE OF THE FMDV LEADER PROTEASE
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PROTEASE (NONSTRUCTURAL PROTEIN P20A)
Authors:Guarne, A, Tormo, J, Kirchweger, R, Pfistermueller, D, Skern, T, Fita, I.
Deposit date:1999-11-13
Release date:2000-11-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Foot-and-Mouth Disease Virus Leader Protease: A Papain-Like Fold Adapted for Self-Processing and Eif4G Recognition.
Embo J., 17, 1998
1X9Z
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BU of 1x9z by Molmil
Crystal structure of the MutL C-terminal domain
Descriptor: CHLORIDE ION, DNA mismatch repair protein mutL, GLYCEROL, ...
Authors:Guarne, A, Ramon-Maiques, S, Wolff, E.M, Ghirlando, R, Hu, X, Miller, J.H, Yang, W.
Deposit date:2004-08-24
Release date:2004-10-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair
Embo J., 23, 2004
1XRX
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BU of 1xrx by Molmil
Crystal structure of a DNA-binding protein
Descriptor: CALCIUM ION, SeqA protein
Authors:Guarne, A, Brendler, T, Zhao, Q, Ghirlando, R, Austin, S, Yang, W.
Deposit date:2004-10-16
Release date:2005-05-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization.
Embo J., 24, 2005
5T2S
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BU of 5t2s by Molmil
Structure of the FHA1 domain of Rad53 bound simultaneously to the BRCT domain of Dbf4 and a phosphopeptide.
Descriptor: ASP-GLY-GLU-SER-TPO-ASP-GLU-ASP-ASP, DDK kinase regulatory subunit DBF4,Serine/threonine-protein kinase RAD53, GLYCEROL
Authors:Guarne, A, Almawi, A, Matthews, L.
Deposit date:2016-08-24
Release date:2016-10-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:'AND' logic gates at work: Crystal structure of Rad53 bound to Dbf4 and Cdc7.
Sci Rep, 6, 2016
1QMY
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BU of 1qmy by Molmil
FMDV LEADER PROTEASE (LBSHORT-C51A-C133S)
Descriptor: 1,2-ETHANEDIOL, PROTEASE
Authors:Guarne, A, Tormo, J, Glaser, W, Skern, T, Fita, I.
Deposit date:1999-10-08
Release date:2000-10-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Biochemical Features Distinguish the Foot-and-Mouth Disease Virus Leader Proteinase from Other Papain-Like Enzymes
J.Mol.Biol., 302, 2000
5T2F
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BU of 5t2f by Molmil
Structure of the FHA1 domain of Rad53 bound to the BRCT domain of Dbf4
Descriptor: 1,2-ETHANEDIOL, DDK kinase regulatory subunit DBF4,Serine/threonine-protein kinase RAD53 chimeric protein
Authors:Guarne, A, Almawi, A.W, Matthews, L.A.
Deposit date:2016-08-23
Release date:2017-03-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:'AND' logic gates at work: Crystal structure of Rad53 bound to Dbf4 and Cdc7.
Sci Rep, 6, 2016
3RPU
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BU of 3rpu by Molmil
Crystal structure of the MukE-MukF complex
Descriptor: Chromosome partition protein mukE, Chromosome partition protein mukF
Authors:Guarne, A, Gloyd, M, Ghirlando, R.
Deposit date:2011-04-27
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The role of MukE in assembling a functional MukBEF complex.
J.Mol.Biol., 412, 2011
1EA6
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BU of 1ea6 by Molmil
N-terminal 40kDa fragment of NhPMS2 complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PMS1 PROTEIN HOMOLOG 2
Authors:Guarne, A, Junop, M.S, Yang, W.
Deposit date:2001-07-10
Release date:2001-11-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and Function of the N-Terminal 40 kDa Fragment of Human Pms2: A Monomeric Ghl ATPase
Embo J., 20, 2001
1H7U
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BU of 1h7u by Molmil
hPMS2-ATPgS
Descriptor: MAGNESIUM ION, MISMATCH REPAIR ENDONUCLEASE PMS2, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Guarne, A, Junop, M.S, Yang, W.
Deposit date:2001-07-10
Release date:2001-11-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and Function of the N-Terminal 40 kDa Fragment of Human Pms2: A Monomeric Ghl ATPase
Embo J., 20, 2001
1H7S
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BU of 1h7s by Molmil
N-terminal 40kDa fragment of human PMS2
Descriptor: PMS1 PROTEIN HOMOLOG 2
Authors:Guarne, A, Junop, M.S, Yang, W.
Deposit date:2001-07-10
Release date:2001-11-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and Function of the N-Terminal 40 kDa Fragment of Human Pms2: A Monomeric Ghl ATPase
Embo J., 20, 2001
5D17
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BU of 5d17 by Molmil
Structure of the C-terminal domain of TnsE at 2.85 resolution
Descriptor: Transposon Tn7 transposition protein TnsE
Authors:Guarne, A, Caron, J.J.
Deposit date:2015-08-03
Release date:2015-09-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Conformational toggling controls target site choice for the heteromeric transposase element Tn7.
Nucleic Acids Res., 43, 2015
5D16
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BU of 5d16 by Molmil
Structure of the C-terminal domain of TnsE double mutant - A453V/D523N
Descriptor: GLYCEROL, Transposon Tn7 transposition protein TnsE
Authors:Guarne, A, Caron, J.J.
Deposit date:2015-08-03
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Conformational toggling controls target site choice for the heteromeric transposase element Tn7.
Nucleic Acids Res., 43, 2015
6MF5
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BU of 6mf5 by Molmil
Crystal structure of budding yeast Cdc5 polo-box domain in complex with Spc72 phosphopeptide.
Descriptor: CHLORIDE ION, Cell cycle serine/threonine-protein kinase CDC5/MSD2, Spc72
Authors:Guarne, A, Almawi, A.W.
Deposit date:2018-09-09
Release date:2020-02-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Distinct surfaces on Cdc5/PLK Polo-box domain orchestrate combinatorial substrate recognition during cell division.
Sci Rep, 10, 2020
6MF4
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BU of 6mf4 by Molmil
Crystal structure of the polo-box domain of Cdc5 from budding yeast.
Descriptor: Cell cycle serine/threonine-protein kinase CDC5/MSD2, ZINC ION
Authors:Guarne, A, Almawi, A.W.
Deposit date:2018-09-09
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Distinct surfaces on Cdc5/PLK Polo-box domain orchestrate combinatorial substrate recognition during cell division.
Sci Rep, 10, 2020
6MF6
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BU of 6mf6 by Molmil
Crystal structure of budding yeast Cdc5 polo-box domain in complex with the Dbf4 polo-interacting region.
Descriptor: Cell cycle serine/threonine-protein kinase CDC5/MSD2, DDK kinase regulatory subunit DBF4
Authors:Guarne, A, Almawi, A.W.
Deposit date:2018-09-09
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Distinct surfaces on Cdc5/PLK Polo-box domain orchestrate combinatorial substrate recognition during cell division.
Sci Rep, 10, 2020
3FMT
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BU of 3fmt by Molmil
Crystal structure of SeqA bound to DNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-D(*GP*AP*GP*TP*CP*GP*(6MA)P*TP*CP*GP*GP*CP*GP*GP*GP*(6MA)P*TP*CP*CP*TP*TP*A)-3', 5'-D(*TP*CP*TP*AP*AP*GP*GP*AP*TP*CP*CP*CP*GP*CP*CP*GP*AP*TP*CP*GP*AP*C)-3', ...
Authors:Chung, Y.S, Brendler, T, Austin, S, Guarne, A.
Deposit date:2008-12-22
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.983 Å)
Cite:Structural insights into the cooperative binding of SeqA to a tandem GATC repeat
Nucleic Acids Res., 37, 2009

 

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