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PDB: 146 results

3EUG
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI URACIL DNA GLYCOSYLASE AND ITS COMPLEXES WITH URACIL AND GLYCEROL: STRUCTURE AND GLYCOSYLASE MECHANISM REVISITED
Descriptor: GLYCEROL, PROTEIN (GLYCOSYLASE)
Authors:Xiao, G, Tordova, M, Jagadeesh, J, Drohat, A.C, Stivers, J.T, Gilliland, G.L.
Deposit date:1998-10-13
Release date:1999-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited.
Proteins, 35, 1999
3MBX
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BU of 3mbx by Molmil
Crystal structure of chimeric antibody X836
Descriptor: PHOSPHATE ION, SODIUM ION, X836 HEAVY CHAIN, ...
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L.
Deposit date:2010-03-26
Release date:2010-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:On the domain pairing in chimeric antibodies.
Mol.Immunol., 47, 2010
3MCK
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BU of 3mck by Molmil
Crystal structure of anti-beta-amyloid antibody C705
Descriptor: ACETATE ION, C705 MONOCLONAL HEAVY CHAIN, C705 MONOCLONAL LIGHT CHAIN
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L.
Deposit date:2010-03-29
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Antibody modeling assessment.
Proteins, 79, 2011
3MCL
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Anti-beta-amyloid antibody c706 fab in space group P21
Descriptor: C706 MONOCLONAL HEAVY CHAIN, C706 MONOCLONAL LIGHT CHAIN
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L.
Deposit date:2010-03-29
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:His-tag binding by antibody C706 mimics Beta-amyloid recognition.
J.Mol.Recognit., 24, 2010
3QPQ
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BU of 3qpq by Molmil
Crystal structure of ANTI-TLR3 antibody C1068 FAB
Descriptor: C1068 heavy chain, C1068 light chain, GLYCEROL, ...
Authors:Luo, J, Obmolova, G, Teplyakov, A, Gilliland, G.L.
Deposit date:2011-02-14
Release date:2011-08-10
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Fab C1068
To be Published
3NCJ
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Crystal structure of Fab15 Mut8
Descriptor: ACETATE ION, Fab15 Mut8 heavy chain, Fab15 Mut8 light chain, ...
Authors:Luo, J, Feng, Y, Gilliland, G.L.
Deposit date:2010-06-04
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Co-evolution of antibody stability and Vk CDR-L3 canonical structure
To be Published
3NAA
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BU of 3naa by Molmil
Crystal structure of Fab15 Mut5
Descriptor: ACETATE ION, Fab15 Mut5 heavy chain, Fab15 Mut5 light chain, ...
Authors:Luo, J, Feng, Y, Gilliland, G.L.
Deposit date:2010-06-01
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Co-evolution of antibody stability and Vk CDR-L3 canonical structure
To be Published
3NZH
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BU of 3nzh by Molmil
Crystal structure of anti-emmprin antibody 5F6 FAB
Descriptor: 5F6 HEAVY CHAIN, 5F6 LIGHT CHAIN, COBALT (II) ION, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
Deposit date:2010-07-16
Release date:2011-07-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of anti-emmprin antibody 5F6 FAB
To be Published
3O11
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BU of 3o11 by Molmil
Anti-beta-amyloid antibody c706 fab in space group c2
Descriptor: C706 HEAVY CHAIN variable region, Ig gamma-1 chain C region chimera, C706 LIGHT CHAIN variable region, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
Deposit date:2010-07-20
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:His-tag binding by antibody C706 mimics beta-amyloid recognition.
J.Mol.Recognit., 24, 2011
3QPX
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Crystal structure of Fab C2507
Descriptor: CADMIUM ION, CHLORIDE ION, Fab C2507 heavy chain, ...
Authors:Luo, J, Teplyakov, A, Obmolova, O, Malia, T, Gilliland, G.L.
Deposit date:2011-02-14
Release date:2011-08-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Fab C2507
To be Published
3ULS
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Crystal structure of Fab12
Descriptor: Fab12 heavy chain, Fab12 light chain
Authors:Luo, J, Gilliland, G.L, Obmolova, O, Malia, T, Teplyakov, A.
Deposit date:2011-11-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Lateral Clustering of TLR3:dsRNA Signaling Units Revealed by TLR3ecd:3Fabs Quaternary Structure.
J.Mol.Biol., 421, 2012
3ULU
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Structure of quaternary complex of human TLR3ecd with three Fabs (Form1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab1068 heavy chain, ...
Authors:Luo, J, Gilliland, G.L, Obmolova, O, Malia, T, Teplyakov, A.
Deposit date:2011-11-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Lateral Clustering of TLR3:dsRNA Signaling Units Revealed by TLR3ecd:3Fabs Quaternary Structure.
J.Mol.Biol., 421, 2012
3ULV
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Structure of quaternary complex of human TLR3ecd with three Fabs (Form2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab1068 heavy chain, ...
Authors:Luo, J, Gilliland, G.L, Obmolova, O, Malia, T, Teplyakov, A.
Deposit date:2011-11-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.522 Å)
Cite:Lateral Clustering of TLR3:dsRNA Signaling Units Revealed by TLR3ecd:3Fabs Quaternary Structure.
J.Mol.Biol., 421, 2012
1YI7
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BU of 1yi7 by Molmil
Beta-d-xylosidase (selenomethionine) XYND from Clostridium Acetobutylicum
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-xylosidase, family 43 glycosyl hydrolase, ...
Authors:Teplyakov, A, Fedorov, E, Gilliland, G.L, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-01-11
Release date:2005-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of beta-xylosidase from clostridium acetobutylicum
To be Published
1Y7B
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BU of 1y7b by Molmil
BETA-D-XYLOSIDASE, A FAMILY 43 GLYCOSIDE HYDROLASE
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-xylosidase, family 43 glycosyl hydrolase, ...
Authors:Teplyakov, A, Fedorov, E, Gilliland, G.L, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-08
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of beta-xylosidase from Clostridium acetobutylicum
To be Published
1PB0
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BU of 1pb0 by Molmil
YCDX PROTEIN IN AUTOINHIBITED STATE
Descriptor: FORMIC ACID, Hypothetical protein ycdX, SULFATE ION, ...
Authors:Teplyakov, A, Obmolova, G, Khil, P.P, Camerini-Otero, R.D, Gilliland, G.L.
Deposit date:2003-05-14
Release date:2004-05-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Autoregulation of YcdX protein
To be Published
1SUB
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BU of 1sub by Molmil
CALCIUM-INDEPENDENT SUBTILISIN BY DESIGN
Descriptor: ACETONE, CALCIUM ION, POTASSIUM ION, ...
Authors:Gallagher, T, Bryan, P, Gilliland, G.L.
Deposit date:1992-06-10
Release date:1994-01-31
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Calcium-independent subtilisin by design.
Proteins, 16, 1993
1S4C
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BU of 1s4c by Molmil
YHCH PROTEIN (HI0227) COPPER COMPLEX
Descriptor: ACETATE ION, COPPER (II) ION, Protein HI0227
Authors:Teplyakov, A, Obmolova, G, Toedt, J, Gilliland, G.L.
Deposit date:2004-01-15
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the bacterial YhcH protein indicates a role in sialic acid catabolism.
J.Bacteriol., 187, 2005
1SUA
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BU of 1sua by Molmil
SUBTILISIN BPN'
Descriptor: SUBTILISIN BPN', TETRAPEPTIDE ALA-LEU-ALA-LEU
Authors:Almog, O, Gilliland, G.L.
Deposit date:1997-01-14
Release date:1998-01-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of calcium-independent subtilisin BPN' with restored thermal stability folded without the prodomain.
Proteins, 31, 1998
1SUP
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BU of 1sup by Molmil
SUBTILISIN BPN' AT 1.6 ANGSTROMS RESOLUTION: ANALYSIS OF DISCRETE DISORDER AND COMPARISON OF CRYSTAL FORMS
Descriptor: CALCIUM ION, SODIUM ION, SUBTILISIN BPN', ...
Authors:Gallagher, D.T, Oliver, J.D, Betzel, C, Gilliland, G.L.
Deposit date:1995-08-14
Release date:1995-11-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Subtilisin BPN' at 1.6 A resolution: analysis for discrete disorder and comparison of crystal forms.
Acta Crystallogr.,Sect.D, 52, 1996
1SUE
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BU of 1sue by Molmil
SUBTILISIN BPN' FROM BACILLUS AMYLOLIQUEFACIENS, MUTANT
Descriptor: DIISOPROPYL PHOSPHONATE, SODIUM ION, SUBTILISIN BPN'
Authors:Gallagher, D.T, Bryan, P, Pan, Q, Gilliland, G.L.
Deposit date:1998-02-17
Release date:1998-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of ionic strength dependence of crystal growth rates in a subtilisin variant.
J.Cryst.Growth, 193, 1998
1SUC
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BU of 1suc by Molmil
CALCIUM-INDEPENDENT SUBTILISIN BY DESIGN
Descriptor: ACETONE, POTASSIUM ION, SUBTILISIN BPN' CRB-S3
Authors:Gallagher, T, Bryan, P, Gilliland, G.L.
Deposit date:1992-06-10
Release date:1994-01-31
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Calcium-independent subtilisin by design.
Proteins, 16, 1993
1SUD
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BU of 1sud by Molmil
CALCIUM-INDEPENDENT SUBTILISIN BY DESIGN
Descriptor: ACETONE, CALCIUM ION, POTASSIUM ION, ...
Authors:Gallagher, T, Bryan, P, Gilliland, G.L.
Deposit date:1992-06-10
Release date:1994-01-31
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Calcium-independent subtilisin by design.
Proteins, 16, 1993
5TLK
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BU of 5tlk by Molmil
COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND H2191
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD27 antigen, H2191 HEAVY CHAIN, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
Deposit date:2016-10-11
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Epitope-dependent mechanisms of CD27 neutralization revealed by X-ray crystallography.
Mol. Immunol., 83, 2017
5TLJ
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COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND M2191
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD27 antigen, M2177 HEAVY CHAIN, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
Deposit date:2016-10-11
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Epitope-dependent mechanisms of CD27 neutralization revealed by X-ray crystallography.
Mol. Immunol., 83, 2017

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