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PDB: 281 results

1OEX
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Atomic Resolution Structure of Endothiapepsin in Complex with a Hydroxyethylene Transition State Analogue Inhibitor H261
Descriptor: ENDOTHIAPEPSIN, GLYCEROL, INHIBITOR H261, ...
Authors:Coates, L, Erskine, P.T, Mall, S, Gill, R.S, Wood, S.P, Myles, D.A.A, Cooper, J.B.
Deposit date:2003-03-31
Release date:2003-04-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic Resolution Analysis of the Catalytic Site of an Aspartic Proteinase and an Unexpected Mode of Binding by Short Peptides
Protein Sci., 12, 2003
1OD1
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Endothiapepsin PD135,040 complex
Descriptor: ENDOTHIAPEPSIN, N~2~-[(2R)-2-benzyl-3-(tert-butylsulfonyl)propanoyl]-N-{(1R)-1-(cyclohexylmethyl)-3,3-difluoro-2,2-dihydroxy-4-[(2-morpholin-4-ylethyl)amino]-4-oxobutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide, SULFATE ION
Authors:Coates, L, Erskine, P.T, Mall, S, Gill, R.S, Wood, S.P, Cooper, J.B.
Deposit date:2003-02-12
Release date:2003-06-12
Last modified:2012-11-30
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:The Structure of Endothiapepsin Complexed with the Gem-Diol Inhibitor Pd-135,040 at 1.37 A
Acta Crystallogr.,Sect.D, 59, 2003
5CF9
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Cleavage of nicotinamide adenine dinucleotide by the ribosome inactivating protein of Momordica charantia - enzyme-NADP+ co-crystallisation.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NICOTINAMIDE, Ribosome-inactivating protein momordin I
Authors:Vinkovic, M, Wood, S.P, Gill, R, Husain, J, Wood, G.E, Dunn, G.
Deposit date:2015-07-08
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Cleavage of nicotinamide adenine dinucleotide by the ribosome-inactivating protein from Momordica charantia.
Acta Crystallogr.,Sect.F, 71, 2015
4JGZ
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Crystal structure of human coxsackievirus A16 uncoating intermediate (space group I222)
Descriptor: Polyprotein, capsid protein VP1, capsid protein VP2, ...
Authors:Ren, J, Wang, X, Hu, Z, Gao, Q, Sun, Y, Li, X, Porta, C, Walter, T.S, Gilbert, R.J, Zhao, Y, Axford, D, Williams, M, McAuley, K, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
Deposit date:2013-03-04
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Picornavirus uncoating intermediate captured in atomic detail.
Nat Commun, 4, 2013
4S1L
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Structure of Uranotaenia sapphirina cypovirus (CPV17) polyhedrin at 298 K
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, polyhedrin
Authors:Ginn, H.M, Messerschmidt, M, Ji, X, Zhang, H, Axford, D, Gildea, R.J, Winter, G, Brewster, A.S, Hattne, J, Wagner, A, Grimes, J.M, Evans, G, Sauter, N.K, Sutton, G, Stuart, D.I.
Deposit date:2015-01-14
Release date:2015-03-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structure of CPV17 polyhedrin determined by the improved analysis of serial femtosecond crystallographic data.
Nat Commun, 6, 2015
4J72
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Crystal Structure of polyprenyl-phosphate N-acetyl hexosamine 1-phosphate transferase
Descriptor: MAGNESIUM ION, NICKEL (II) ION, Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Lee, S.Y, Chung, B.C, Gillespie, R.A, Kwon, D.Y, Guan, Z, Zhou, P, Hong, J.
Deposit date:2013-02-12
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of MraY, an essential membrane enzyme for bacterial cell wall synthesis.
Science, 341, 2013
4JGY
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Crystal structure of human coxsackievirus A16 uncoating intermediate (space group P4232)
Descriptor: Polyprotein, capsid protein VP1, capsid protein VP2, ...
Authors:Ren, J, Wang, X, Hu, Z, Gao, Q, Sun, Y, Li, X, Porta, C, Walter, T.S, Gilbert, R.J, Zhao, Y, Axford, D, Williams, M, Mcauley, K, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
Deposit date:2013-03-04
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Picornavirus uncoating intermediate captured in atomic detail.
Nat Commun, 4, 2013
2BZX
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Atomic model of CrkL-SH3C monomer
Descriptor: CRK-LIKE PROTEIN
Authors:Harkiolaki, M, Gilbert, R.J, Jones, E.Y, Feller, S.M.
Deposit date:2005-08-24
Release date:2006-09-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The C-Terminal SH3 Domain of Crkl as a Dynamic Dimerization Module Transiently Exposing a Nuclear Export Signal.
Structure, 14, 2006
2BZY
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Homodimer of CrkL-SH3C domain
Descriptor: CRK-LIKE PROTEIN
Authors:Harkiolaki, M, Gilbert, R.J, Jones, E.Y, Feller, S.M.
Deposit date:2005-08-24
Release date:2006-09-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The C-Terminal SH3 Domain of Crkl as a Dynamic Dimerization Module Transiently Exposing a Nuclear Export Signal.
Structure, 14, 2006
1KZN
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Crystal Structure of E. coli 24kDa Domain in Complex with Clorobiocin
Descriptor: CLOROBIOCIN, DNA GYRASE SUBUNIT B
Authors:Lafitte, D, Lamour, V, Tsvetkov, P.O, Makarov, A.A, Klich, M, Deprez, P, Moras, D, Briand, C, Gilli, R.
Deposit date:2002-02-07
Release date:2002-06-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA gyrase interaction with coumarin-based inhibitors: the role of the hydroxybenzoate isopentenyl moiety and the 5'-methyl group of the noviose.
Biochemistry, 41, 2002
3UTK
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Structure of the pilotin of the type II secretion system
Descriptor: Lipoprotein outS
Authors:Rehman, S, Pickersgill, R.W.
Deposit date:2011-11-25
Release date:2011-12-14
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the pilotin of the type II secretion system
TO BE PUBLISHED
1XEU
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Crystal Structure of Internalin C from Listeria monocytogenes
Descriptor: internalin C
Authors:Ooi, A, Hussain, S, Seyedarabi, A, Pickersgill, R.W.
Deposit date:2004-09-13
Release date:2005-08-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of internalin C from Listeria monocytogenes.
Acta Crystallogr.,Sect.D, 62, 2006
5TBY
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HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF OBTAINED BY HOMOLOGY MODELING (USING SWISS-MODEL) OF HUMAN SEQUENCE FROM APHONOPELMA HOMOLOGY MODEL (PDB-3JBH), RIGIDLY FITTED TO HUMAN BETA-CARDIAC NEGATIVELY STAINED THICK FILAMENT 3D-RECONSTRUCTION (EMD-2240)
Descriptor: Myosin light chain 3, Myosin regulatory light chain 2, ventricular/cardiac muscle isoform, ...
Authors:ALAMO, L, WARE, J.S, PINTO, A, GILLILAN, R.E, SEIDMAN, J.G, SEIDMAN, C.E, PADRON, R.
Deposit date:2016-09-13
Release date:2017-06-07
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Effects of myosin variants on interacting-heads motif explain distinct hypertrophic and dilated cardiomyopathy phenotypes.
Elife, 6, 2017
3ZXG
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lysenin sphingomyelin complex
Descriptor: LYSENIN, SULFATE ION, TRIMETHYL-[2-[[(2S,3S)-2-(OCTADECANOYLAMINO)-3-OXIDANYL-BUTOXY]-OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-10
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
3ZX7
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Complex of lysenin with phosphocholine
Descriptor: LYSENIN, PHOSPHATE ION, PHOSPHOCHOLINE, ...
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-08
Release date:2012-09-19
Last modified:2012-10-03
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
4E80
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Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: Poly(A) RNA polymerase protein cid1, URIDINE 5'-TRIPHOSPHATE
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
4E8F
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Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: ACETATE ION, GLYCEROL, Poly(A) RNA polymerase protein cid1
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-20
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
4E7X
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Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: ACETATE ION, Poly(A) RNA polymerase protein cid1
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
2LNV
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Solution structure of GspC-HR of typeII secretion system
Descriptor: General secretion pathway protein C
Authors:Gu, S, Kelly, G, Pickersgill, R.
Deposit date:2012-01-05
Release date:2012-01-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of Homology Region (HR) Domain of Type II Secretion System.
J.Biol.Chem., 287, 2012
1X87
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2.4A X-ray structure of Urocanase protein complexed with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Urocanase protein
Authors:Tereshko, V, Zaborske, J, Gilbreth, R, Dementieva, I, Collart, F, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-08-17
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:2.4A X-ray structure of Urocanase protein complexed with NAD
To be Published
1YJD
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Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment of 5.11A1 antibody heavy chain, Fab fragment of 5.11A1 antibody light chain, ...
Authors:Evans, E.J, Esnouf, R.M, Manso-Sancho, R, Gilbert, R.J.C, James, J.R, Sorensen, P, Stuart, D.I, Davis, S.J.
Deposit date:2005-01-14
Release date:2005-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a soluble CD28-Fab complex
Nat.Immunol., 6, 2005
2UZJ
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Crystal structure of the mature streptococcal cysteine protease, mSpeB
Descriptor: N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, STREPTOPAIN
Authors:Olsen, J.G, Dagil, R, Niclasen, L.M, Soerensen, O.E, Kragelund, B.B.
Deposit date:2008-09-16
Release date:2009-09-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the Mature Streptococcal Cysteine Protease Exotoxin Mspeb in its Active Dimeric Form.
J.Mol.Biol., 393, 2009
2XWP
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ANAEROBIC COBALT CHELATASE (CbiK) FROM SALMONELLA TYPHIMURIUM IN COMPLEX WITH METALATED TETRAPYRROLE
Descriptor: COBALT SIROHYDROCHLORIN, GLYCEROL, SIROHYDROCHLORIN COBALTOCHELATASE
Authors:Ladakis, D, Brindley, A.A, Deery, E, Warren, M.J, Pickersgill, R.W.
Deposit date:2010-11-04
Release date:2010-12-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution in a Family of Chelatases Facilitated by the Introduction of Active Site Asymmetry and Protein Oligomerization.
Proc.Natl.Acad.Sci.USA, 108, 2011
2IZP
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BipD - an invasion protein associated with the type-III secretion system of Burkholderia pseudomallei.
Descriptor: PUTATIVE MEMBRANE ANTIGEN
Authors:Erskine, P.T, Knight, M.J, Ruaux, A, Mikolajek, H, Wong-Fat-Sang, N, Withers, J, Gill, R, Wood, S.P, Wood, M, Fox, G.C, Cooper, J.B.
Deposit date:2006-07-25
Release date:2006-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High Resolution Structure of Bipd: An Invasion Protein Associated with the Type III Secretion System of Burkholderia Pseudomallei.
J.Mol.Biol., 363, 2006
2C8S
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CYTOCHROME CL FROM METHYLOBACTERIUM EXTORQUENS
Descriptor: CALCIUM ION, CYTOCHROME C-L, PROTOPORPHYRIN IX CONTAINING FE
Authors:Williams, P.A, Coates, L, Mohammed, F, Gill, R, Erskine, P.T, Wood J, S.P, Cooper, B, Anthony, C.
Deposit date:2005-12-06
Release date:2005-12-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1.6A X-Ray Structure of the Unusual C-Type Cytochrome, Cytochrome Cl, from the Methylotrophic Bacterium Methylobacterium Extorquens.
J.Mol.Biol., 357, 2006

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