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PDB: 281 results
1K82
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BU of 1k82 by Molmil
Crystal structure of E.coli formamidopyrimidine-DNA glycosylase (Fpg) covalently trapped with DNA
Descriptor: 5'-D(*CP*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', 5'-D(*GP*GP*CP*TP*TP*CP*CP*TP*CP*CP*TP*GP*G)-3', ZINC ION, ...
Authors:Gilboa, R, Zharkov, D.O, Golan, G, Fernandes, A.S, Gerchman, S.E, Matz, E, Kycia, J.H, Grollman, A.P, Shoham, G.
Deposit date:2001-10-22
Release date:2002-06-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of formamidopyrimidine-DNA glycosylase covalently complexed to DNA.
J.Biol.Chem., 277, 2002
1F2O
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BU of 1f2o by Molmil
CRYSTAL STRUCTURE OF THE STREPTOMYCES GRISEUS AMINOPEPTIDASE COMPLEXED WITH L-LEUCINE
Descriptor: AMINOPEPTIDASE, CALCIUM ION, LEUCINE, ...
Authors:Gilboa, R, Spungin-Bialik, A, Wohlfahrt, G, Schomburg, D, Blumberg, S, Shoham, G.
Deposit date:2000-05-28
Release date:2001-08-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Interactions of Streptomyces griseus aminopeptidase with amino acid reaction products and their implications toward a catalytic mechanism.
Proteins, 44, 2001
1F2P
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BU of 1f2p by Molmil
CRYSTAL STRUCTURE OF THE STREPTOMYCES GRISEUS AMINOPEPTIDASE COMPLEXED WITH L-PHENYLALANINE
Descriptor: AMINOPEPTIDASE, CALCIUM ION, PHENYLALANINE, ...
Authors:Gilboa, R, Spungin-Bialik, A, Wohlfahrt, G, Schomburg, D, Blumberg, S, Shoham, G.
Deposit date:2000-05-28
Release date:2001-08-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Interactions of Streptomyces griseus aminopeptidase with amino acid reaction products and their implications toward a catalytic mechanism.
Proteins, 44, 2001
1DTG
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BU of 1dtg by Molmil
HUMAN TRANSFERRIN N-LOBE MUTANT H249E
Descriptor: CARBONATE ION, FE (III) ION, TRANSFERRIN
Authors:MacGillivray, R.T, Bewley, M.C, Smith, C.A, He, Q.Y, Mason, A.B.
Deposit date:2000-01-12
Release date:2000-01-21
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mutation of the iron ligand His 249 to Glu in the N-lobe of human transferrin abolishes the dilysine "trigger" but does not significantly affect iron release.
Biochemistry, 39, 2000
6QEY
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BU of 6qey by Molmil
IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties
Descriptor: ACETONITRILE, Insulin-like growth factor 2 mRNA-binding protein 1, PHOSPHATE ION
Authors:Dagil, R, Ball, N.J, Ogrodowicz, R.W, Purkiss, A.G, Taylor, I.A, Ramos, A.
Deposit date:2019-01-09
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties.
Nucleic Acids Res., 47, 2019
1A8F
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BU of 1a8f by Molmil
HUMAN SERUM TRANSFERRIN, RECOMBINANT N-TERMINAL LOBE
Descriptor: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
Authors:Macgillivray, R.T.A, Moore, S.A, Chen, J, Anderson, B.F, Baker, H, Luo, Y, Bewley, M, Smith, C.A, Murphy, M.E.P, Wang, Y, Mason, A.B, Woodworth, R.C, Brayer, G.D, Baker, E.N.
Deposit date:1998-03-25
Release date:1998-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Two high-resolution crystal structures of the recombinant N-lobe of human transferrin reveal a structural change implicated in iron release.
Biochemistry, 37, 1998
1A8E
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BU of 1a8e by Molmil
HUMAN SERUM TRANSFERRIN, RECOMBINANT N-TERMINAL LOBE
Descriptor: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
Authors:Macgillivray, R.T.A, Moore, S.A, Chen, J, Anderson, B.F, Baker, H, Luo, Y, Bewley, M, Smith, C.A, Murphy, M.E.P, Wang, Y, Mason, A.B, Woodworth, R.C, Brayer, G.D, Baker, E.N.
Deposit date:1998-03-24
Release date:1998-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Two high-resolution crystal structures of the recombinant N-lobe of human transferrin reveal a structural change implicated in iron release.
Biochemistry, 37, 1998
4P7T
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BU of 4p7t by Molmil
Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: Polyhedral bodies
Authors:Pickersgill, R.W, Frank, S, Pang, A, Warren, M.J.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
3IO0
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BU of 3io0 by Molmil
Crystal structure of EtuB from Clostridium kluyveri
Descriptor: EtuB protein
Authors:Pickersgill, R.W, Warren, M.J.
Deposit date:2009-08-13
Release date:2009-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilisation in Clostridium kluyveri.
Biochem.J., 423, 2009
3II9
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BU of 3ii9 by Molmil
Crystal structure of glutaryl-coa dehydrogenase from Burkholderia pseudomallei at 1.73 Angstrom
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glutaryl-CoA dehydrogenase, ...
Authors:Ismagilov, R.F, Li, L, Du, W.B, Staker, B, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-07-31
Release date:2009-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:User-loaded SlipChip for equipment-free multiplexed nanoliter-scale experiments.
J.Am.Chem.Soc., 132, 2010
2O0W
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BU of 2o0w by Molmil
Pectate lyase bound to hexasaccharide compound IV
Descriptor: CALCIUM ION, Pectate lyase
Authors:Pickersgill, R.W, Seyedarabi, A.
Deposit date:2006-11-28
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and thermodynamic insights into the mechanism of pectate lyase
To be Published
2OBG
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BU of 2obg by Molmil
Crystal Structure of Monobody MBP-74/Maltose Binding Protein Fusion Complex
Descriptor: Maltose Binding periplasmic Protein and Monobody MBP-74 Fusion protein
Authors:Gilbreth, R.N, Tereshko, V, Koide, S.
Deposit date:2006-12-19
Release date:2007-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:High-affinity single-domain binding proteins with a binary-code interface.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2O17
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BU of 2o17 by Molmil
Pectate lyase bound to hexasaccharide
Descriptor: CALCIUM ION, Pectate lyase, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Pickersgill, R.W, Seyedarabi, A.
Deposit date:2006-11-28
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase.
Biochemistry, 49, 2010
2NZM
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BU of 2nzm by Molmil
Hexasaccharide I bound to Bacillus subtilis pectate lyase
Descriptor: CALCIUM ION, Pectate lyase, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Pickersgill, R.W, Seyedarabi, A.
Deposit date:2006-11-24
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase.
Biochemistry, 49, 2010
2O04
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BU of 2o04 by Molmil
Pectate lyase bound to hexasaccharide compound II
Descriptor: CALCIUM ION, Pectate lyase, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Pickersgill, R.W, Seyedarabi, A.
Deposit date:2006-11-27
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase.
Biochemistry, 49, 2010
2O1D
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BU of 2o1d by Molmil
Pectate lyase bound to trisaccharide
Descriptor: CALCIUM ION, Pectate lyase, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Pickersgill, R.W, Seyedarabi, A.
Deposit date:2006-11-28
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase.
Biochemistry, 49, 2010
2O0V
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BU of 2o0v by Molmil
Pectate lyase bound to hexasaccharide compound III
Descriptor: CALCIUM ION, Pectate lyase, alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
Authors:Pickersgill, R.W, Seyedarabi, A.
Deposit date:2006-11-28
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase.
Biochemistry, 49, 2010
3CSB
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BU of 3csb by Molmil
Crystal Structure of Monobody YSX1/Maltose Binding Protein Fusion Complex
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Gilbreth, R.N, Koide, S.
Deposit date:2008-04-09
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
J.Mol.Biol., 381, 2008
4FDV
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BU of 4fdv by Molmil
CobH from Rhodobacter capsulatus (SB1003) in complex with HBA
Descriptor: 3-[(1R,2R,3R,5R,6S,7R,9Z,12S,13S,14Z,17S,18S,19R)-2,13,18-tris(2-hydroxy-2-oxoethyl)-3,12,17-tris(3-hydroxy-3-oxopropyl)-3,5,8,8,13,15,18,19-octamethyl-1,2,5,6,7,12,17,22-octahydrocorrin-7-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
Authors:Pickersgill, R.W, Schroeder, S, Deery, E, Warren, M.J.
Deposit date:2012-05-29
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.
Nat.Chem.Biol., 8, 2012
1BHE
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BU of 1bhe by Molmil
POLYGALACTURONASE FROM ERWINIA CAROTOVORA SSP. CAROTOVORA
Descriptor: POLYGALACTURONASE
Authors:Pickersgill, R, Smith, D, Worboys, K, Jenkins, J.
Deposit date:1998-06-05
Release date:1998-11-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of polygalacturonase from Erwinia carotovora ssp. carotovora.
J.Biol.Chem., 273, 1998
3KRG
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BU of 3krg by Molmil
Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase
Descriptor: COBALT (II) ION, GLYCEROL, Pectate lyase, ...
Authors:Pickersgill, R.W, To, T.T.
Deposit date:2009-11-18
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into substrate specificity and the anti beta-elimination mechanism of pectate lyase
Biochemistry, 49, 2010
3CSG
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BU of 3csg by Molmil
Crystal Structure of Monobody YS1(MBP-74)/Maltose Binding Protein Fusion Complex
Descriptor: Maltose-binding protein Monobody YS1 Fusion
Authors:Gilbreth, R.N, Koide, S.
Deposit date:2008-04-09
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
J.Mol.Biol., 381, 2008
1CP7
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BU of 1cp7 by Molmil
AMINOPEPTIDASE FROM STREPTOMYCES GRISEUS
Descriptor: AMINOPEPTIDASE, CALCIUM ION, ZINC ION
Authors:Gilboa, R, Greenblatt, H.M, Perach, M, Spungin-Bialik, A, Lessel, U, Schomburg, D, Blumberg, S, Shoham, G.
Deposit date:1999-06-10
Release date:2000-05-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Interactions of Streptomyces griseus aminopeptidase with a methionine product analogue: a structural study at 1.53 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
3NUT
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BU of 3nut by Molmil
Crystal structure of the methyltransferase CobJ
Descriptor: GLYCEROL, Precorrin-3 methylase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Pickersgill, R.W, Hutchison, T, To, T.T.
Deposit date:2010-07-07
Release date:2011-07-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of the methyltransferase CobJ
TO BE PUBLISHED
3RZW
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BU of 3rzw by Molmil
Crystal Structure of the Monobody ySMB-9 bound to human SUMO1
Descriptor: GLYCEROL, Monobody ySMB-9, Small ubiquitin-related modifier 1
Authors:Gilbreth, R.N, Koide, S.
Deposit date:2011-05-12
Release date:2011-12-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Teaching an old scaffold new tricks: monobodies constructed using alternative surfaces of the FN3 scaffold.
J.Mol.Biol., 415, 2012

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