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PDB: 637 results

4KEM
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BU of 4kem by Molmil
Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site
Descriptor: ACRYLIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Vetting, M.W, Wichelecki, D, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-04-25
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site
To be Published
4Q60
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BU of 4q60 by Molmil
Crystal structure of a 4-hydroxyproline epimerase from Burkholderia Multivorans atcc 17616, target EFI-506586, open form, with bound pyrrole-2-carboxylate
Descriptor: GLYCEROL, PROLINE RACEMASE, PYRROLE-2-CARBOXYLATE
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Sojitra, S, Stead, M, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-18
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:CRYSTAL STRUCTURE OF PROLINE RACEMASE Bmul_4447 FROM Burkholderia multivorans, TARGET EFI-506586
To be Published
3R25
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BU of 3r25 by Molmil
Crystal structure of enolase superfamily member from Vibrionales bacterium complexed with Mg and Glycerol in the active site
Descriptor: GLYCEROL, MAGNESIUM ION, mandelate racemase / muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2011-03-13
Release date:2012-03-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Crystal structure of enolase superfamily member from VIBRIONALES BACTERIUM complexed with Mg and Glycerol in the active site
To be Published
3RCM
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BU of 3rcm by Molmil
crystal structure of EFI target 500140:TatD family hydrolase from Pseudomonas putida
Descriptor: ACETATE ION, CITRIC ACID, TatD family hydrolase, ...
Authors:Kim, J, Toro, R, Hillerich, B, Seidel, R.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-03-31
Release date:2011-04-20
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:crystal structure of EFI target 500140:TatD family hydrolase from Pseudomonas putida
TO BE PUBLISHED
4Q2H
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BU of 4q2h by Molmil
Crystal structure of probable proline racemase from agrobacterium radiobacter K84, TARGET EFI-506561, with bound carbonate
Descriptor: BICARBONATE ION, GLYCEROL, Proline racemase protein
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-08
Release date:2014-04-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Proline Racemase Arad_0731 from Agrobacterium Radiobacter, Target Efi-506561
To be Published
3RRA
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BU of 3rra by Molmil
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J with magnesium bound
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative D-galactonate dehydratase
Authors:Patskovsky, Y, Ramagopal, U.A, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-29
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of enolase PRK14017 from Ralstonia pickettii
To be Published
3RR1
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BU of 3rr1 by Molmil
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J
Descriptor: CHLORIDE ION, D-MALATE, Putative D-galactonate dehydratase
Authors:Patskovsky, Y, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-28
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of enolase PRK14017 from Ralstonia pickettii
To be Published
4QRZ
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BU of 4qrz by Molmil
Crystal structure of sugar transporter atu4361 from agrobacterium fabrum c58, target efi-510558, with bound maltotriose
Descriptor: ABC-TYPE SUGAR TRANSPORTER, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Stead, M, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Hammonds, J, Love, J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-07-02
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal Structure of Maltoside Transporter from Agrobacterium Radiobacter, Target Efi-510558
To be Published
4GGB
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BU of 4ggb by Molmil
Crystal structure of a proposed galactarolactone cycloisomerase from agrobacterium tumefaciens, TARGET EFI-500704, WITH BOUND CA, DISORDERED LOOPS
Descriptor: CALCIUM ION, CHLORIDE ION, Putative uncharacterized protein
Authors:Vetting, M.W, Bouvier, J.T, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-06
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Purification, crystallization and structural elucidation of D-galactaro-1,4-lactone cycloisomerase from Agrobacterium tumefaciens involved in pectin degradation.
Acta Crystallogr.,Sect.F, 72, 2016
4GRC
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BU of 4grc by Molmil
Crystal structure of DyP-type peroxidase (SCO2276) from Streptomyces coelicolor
Descriptor: CALCIUM ION, HYDROGEN PEROXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
Deposit date:2012-08-24
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
4GP1
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BU of 4gp1 by Molmil
Crystal structure of ISOPRENOID SYNTHASE A3MSH1 (TARGET EFI-501992) from pyrobaculum calidifontis complexed with DMAPP
Descriptor: CHLORIDE ION, DIMETHYLALLYL DIPHOSPHATE, Polyprenyl synthetase, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-20
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structure of Isoprenoid Synthase from Pyrobaculum Calidifontis
To be Published
4GU7
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BU of 4gu7 by Molmil
Crystal structure of DyP-type peroxidase (SCO7193) from Streptomyces coelicolor
Descriptor: NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, Putative uncharacterized protein SCO7193
Authors:Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
Deposit date:2012-08-29
Release date:2013-09-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
3NXL
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BU of 3nxl by Molmil
Crystal structure of Glucarate dehydratase from Burkholderia cepacia complexed with magnesium
Descriptor: CARBONATE ION, Glucarate dehydratase, MAGNESIUM ION
Authors:Fedorov, A.A, Fedorov, E.V, Gerlt, J.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-07-14
Release date:2010-07-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.885 Å)
Cite:Crystal structure of Glucarate dehydratase from Burkholderia cepacia complexed with magnesium
To be Published
4GYP
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BU of 4gyp by Molmil
Crystal structure of the heterotetrameric complex of GlucD and GlucDRP from E. coli K-12 MG1655 (EFI TARGET EFI-506058)
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Lukk, T, Ghasempur, S, Imker, H.J, Gerlt, J.A, Nair, S.K, Enzyme Function Initiative (EFI)
Deposit date:2012-09-05
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Glucarate dehydratase and its related protein from Escherichia coli form a heterotetrameric complex.
to be published
4HP8
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BU of 4hp8 by Molmil
Crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase from Agrobacterium Tumefaciens (target EFI-506435) with bound NADP
Descriptor: 2-deoxy-D-gluconate 3-dehydrogenase, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vetting, M.W, Bouvier, J.T, Groninger-Poe, F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-10-23
Release date:2012-11-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase from Agrobacterium Tumefaciens (target EFI-506435) with bound NADP
To be Published
3P93
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BU of 3p93 by Molmil
Crystal structure of D-mannonate dehydratase from Chromohalobacter Salexigens complexed with MG,D-Mannonate and 2-keto-3-deoxy-D-Gluconate
Descriptor: 2-KETO-3-DEOXYGLUCONATE, D-MANNONIC ACID, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-15
Release date:2011-10-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE FROM CHROMOHALOBACTER SALEXIGENS complexed with MG,D-Mannonate and 2-keto-3-deoxy-D-Gluconate
To be Published
3OW1
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BU of 3ow1 by Molmil
Crystal structure of D-mannonate dehydratase from Chromohalobacter salexigens complexed with MG
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-09-17
Release date:2011-09-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE FROM CHROMOHALOBACTER SALEXIGENS complexed with MG
To be Published
4IBP
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BU of 4ibp by Molmil
Crystal structure of a glutathione transferase family member from Pseudomonas fluorescens Pf-5, target EFI-900011, with bound glutathione
Descriptor: GLUTATHIONE, Glutathione S-transferase-like protein YibF, SULFATE ION
Authors:Vetting, M.W, Sauder, J.M, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Burley, S.K, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-12-09
Release date:2012-12-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a glutathione transferase family member from Pseudomonas fluorescens Pf-5, target IFI-900011, with bound glutathione
To be Published
3OZM
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BU of 3ozm by Molmil
Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg, m-Xylarate and L-Lyxarate
Descriptor: D-xylaric acid, GLYCEROL, L-arabinaric acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-09-25
Release date:2011-09-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg, m-Xylarate and L-Lyxarate
TO BE PUBLISHED
4IKH
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BU of 4ikh by Molmil
Crystal structure of a glutathione transferase family member from Pseudomonas fluorescens pf-5, target efi-900003, with two glutathione bound
Descriptor: CHLORIDE ION, GLUTATHIONE, Glutathione S-transferase
Authors:Vetting, M.W, Sauder, J.M, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Burley, S.K, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-12-26
Release date:2013-01-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a glutathione transferase family member from Pseudomonas fluorescens pf-5, target efi-900003, with two glutathione bound
To be Published
4ILK
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BU of 4ilk by Molmil
Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MANGANESE (II) ION, Starvation sensing protein rspB, ...
Authors:Lukk, T, Wichelecki, D, Imker, H.J, Gerlt, J.A, Nair, S.K.
Deposit date:2012-12-31
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
To be Published
3RGT
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BU of 3rgt by Molmil
Crystal structure of d-mannonate dehydratase from Chromohalobacter salexigens complexed with D-Arabinohydroxamate
Descriptor: (2S,3R,4R)-2,3,4,5-tetrahydroxy-N-oxo-pentanamide, COBALT (II) ION, D-mannonate dehydratase
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2011-04-09
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of d-mannonate dehydratase from Chromohalobacter salexigens complexed with d-arabinohydroxamate
To be Published
4GKB
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BU of 4gkb by Molmil
Crystal structure of a short chain dehydrogenase homolog (target efi-505321) from burkholderia multivorans, unliganded structure
Descriptor: 1,2-ETHANEDIOL, 3-oxoacyl-[acyl-carrier protein] reductase, CALCIUM ION, ...
Authors:Vetting, M.W, Hobbs, M.E, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Raushel, F.M, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-10
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a short chain dehydrogenase homolog (target efi-505321) from burkholderia multivorans, unliganded structure
To be Published
4GLO
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BU of 4glo by Molmil
Crystal structure of a short chain dehydrogenase homolog (target EFI-505321) from burkholderia multivorans, with bound NAD
Descriptor: 1,2-ETHANEDIOL, 3-oxoacyl-[acyl-carrier protein] reductase, CHLORIDE ION, ...
Authors:Vetting, M.W, Hobbs, M.E, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Raushel, F.M, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-14
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a short chain dehydrogenase homolog (target EFI-505321) from burkholderia multivorans, with bound NAD
To be Published
4FX8
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BU of 4fx8 by Molmil
Crystal structure of the mutant Q185A.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION
Authors:Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
Deposit date:2012-07-02
Release date:2013-06-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9411 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012

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PDB entries from 2024-05-29

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