PDB Search results for query - 日本蛋白质结构数据库

PDB: 187 results

Crystal Structure of the 13-cis Product of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm Laser (5 minutes) at 2.07 Angstrom
Descriptor:	Cellular retinoic acid-binding protein 2, GLYCEROL, RETINAL
Authors:	Ghanbarpour, A, Geiger, J.
Deposit date:	2018-10-11
Release date:	2019-01-09
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.07 Å)
Cite:	Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019

6MOR

Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Y Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.79 Angstrom Resolution
Descriptor:	Cellular retinoic acid-binding protein 2, RETINAL
Authors:	Ghanbarpour, A, Geiger, J.
Deposit date:	2018-10-04
Release date:	2019-01-09
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.79 Å)
Cite:	Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019

6MQW

Crystal Structure of All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm laser (30 seconds) and subsequently dark adapted (10 minutes) at 2.1 Angstrom Resolution
Descriptor:	Cellular retinoic acid-binding protein 2, RETINAL
Authors:	Ghanbarpour, A, Geiger, J.
Deposit date:	2018-10-11
Release date:	2019-01-09
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.09 Å)
Cite:	Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019

4QGW

Crystal sturcture of the R132K:R111L:L121D mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.77 angstrom resolution
Descriptor:	(2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellular retinoic acid-binding protein 2
Authors:	Nosrati, M, Yapici, I, Geiger, J.H.
Deposit date:	2014-05-26
Release date:	2015-01-28
Last modified:	2015-02-11
Method:	X-RAY DIFFRACTION (1.77 Å)
Cite:	"Turn-on" protein fluorescence: in situ formation of cyanine dyes. J.Am.Chem.Soc., 137, 2015

4QGX

Crystal structure of the R132K:R111L:L121E mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.47 angstrom resolution
Descriptor:	(2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, Cellular retinoic acid-binding protein 2
Authors:	Nosrati, M, Yapici, I, Geiger, J.H.
Deposit date:	2014-05-26
Release date:	2015-01-28
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.471 Å)
Cite:	"Turn-on" protein fluorescence: in situ formation of cyanine dyes. J.Am.Chem.Soc., 137, 2015

4QGV

Crystal structure of the R132K:R111L mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.73 angstrom resolution.
Descriptor:	(2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, Cellular retinoic acid-binding protein 2
Authors:	Nosrati, M, Yapici, I, Geiger, J.H.
Deposit date:	2014-05-25
Release date:	2015-01-28
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.73 Å)
Cite:	"Turn-on" protein fluorescence: in situ formation of cyanine dyes. J.Am.Chem.Soc., 137, 2015

6ON5

Crystal Structure of the Zn-bound Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57H Mutant of Human Cellular Retinol Binding Protein II
Descriptor:	Retinol-binding protein 2, ZINC ION
Authors:	Ghanbarpour, A, Geiger, J.
Deposit date:	2019-04-20
Release date:	2019-10-16
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.638 Å)
Cite:	Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches. J.Am.Chem.Soc., 141, 2019

6ON8

Crystal Structure of the Reduced Form of Apo Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57H Mutant of Human Cellular Retinol Binding Protein II
Descriptor:	Retinol-binding protein 2
Authors:	Ghanbarpour, A, Geiger, J.
Deposit date:	2019-04-20
Release date:	2019-10-16
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.395 Å)
Cite:	Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches. J.Am.Chem.Soc., 141, 2019

5F58

Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution
Descriptor:	ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:	Nosrati, M, Nossoni, Z, Geiger, J.H.
Deposit date:	2015-12-04
Release date:	2016-12-07
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.54 Å)
Cite:	Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution To Be Published

5F6B

Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.3 Angstrom Resolution
Descriptor:	ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:	Nosrati, M, Nossoni, Z, Geiger, J.H.
Deposit date:	2015-12-05
Release date:	2016-12-07
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.31 Å)
Cite:	Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol Binding ProteinII in complex with All-trans-Retinal at 1.31 Angstrom Resolution To Be Published

5FAZ

Crystal structure of the Q108K:K40L:T51V mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.4 Angstrom Resolution
Descriptor:	ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:	Nosrati, M, Nossoni, Z, Geiger, J.H.
Deposit date:	2015-12-13
Release date:	2016-12-14
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Crystal structure of the Q108K:K40L:T51V mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution To Be Published

6C7Z

Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with synthetic Ligand Julolidine
Descriptor:	(2E,4E)-3-methyl-5-(2,3,6,7-tetrahydro-1H,5H-pyrido[3,2,1-ij]quinolin-9-yl)penta-2,4-dienal, ACETATE ION, Retinol-binding protein 2
Authors:	Nosrati, M, Geiger, J.H.
Deposit date:	2018-01-23
Release date:	2018-04-25
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (1.42 Å)
Cite:	A Genetically Encoded Ratiometric pH Probe: Wavelength Regulation-Inspired Design of pH Indicators. Chembiochem, 19, 2018

5FEN

Crystal structure of the Q108K:K40L:T53C mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.55 Angstrom Resolution
Descriptor:	ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:	Nossoni, Z, Nosrati, M, Geiger, J.H.
Deposit date:	2015-12-17
Release date:	2016-12-21
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.55 Å)
Cite:	Crystal structure of the Q108K:K40L:T53C mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.55 Angstrom Resolution To Be Published

5FFH

Crystal structure of the Q108K:K40L:T51V:R58W:Y19W mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.68 Angstrom Resolution
Descriptor:	ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:	Nossoni, Z, Nosrati, M, Geiger, J.H.
Deposit date:	2015-12-18
Release date:	2016-12-21
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.68 Å)
Cite:	Crystal structure of the Q108K:K40L:T51V:R58W:Y19W mutant of human Cellular Retinol Binding ProteinII in complex with All-trans-Retinal at 1.68 Angstrom Resolution To Be Published

5F7G

Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W:Q38L mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.48 Angstrom Resolution
Descriptor:	ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:	Nosrati, M, Nossoni, Z, Geiger, J.H.
Deposit date:	2015-12-08
Release date:	2016-12-14
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.48 Å)
Cite:	Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution To Be Published

6DCM

The atomic resolution crystal structure of Kringle 2 variant bound with EACA
Descriptor:	6-AMINOHEXANOIC ACID, Plasminogen
Authors:	Ghanbarpour, A, Geiger, J.
Deposit date:	2018-05-07
Release date:	2019-05-15
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.031 Å)
Cite:	The atomic resolution crystal structure of Kringle 2 variant bound with EACA To Be Published

4YKO

Crystal structure of the R111K:Y134F:T54V:R132Q:P39Q:R59Y:A32Y:F3Q mutant of human Cellular Retinoic Acid Binding Protein II with Retinal at 1.58 angstrom resolution
Descriptor:	Cellular retinoic acid-binding protein 2, RETINAL
Authors:	Nosrati, M, Geiger, J.
Deposit date:	2015-03-04
Release date:	2016-03-09
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.57 Å)
Cite:	A Photoisomerizing Rhodopsin Mimic Observed at Atomic Resolution. J.Am.Chem.Soc., 138, 2016

3CR6

Crystal Structure of the R132K:R111L:A32E Mutant of Cellular Retinoic Acid Binding Protein Type II Complexed with C15-aldehyde (a retinal analog) at 1.22 Angstrom resolution.
Descriptor:	1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, Cellular retinoic acid-binding protein 2
Authors:	Jia, X, Geiger, J.H.
Deposit date:	2008-04-04
Release date:	2009-03-17
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.22 Å)
Cite:	Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes To be Published

3F8A

Crystal Structure of the R132K:R111L:L121E:R59W Mutant of Cellular Retinoic Acid-Binding Protein Type II Complexed with C15-aldehyde (a retinal analog) at 1.95 Angstrom resolution.
Descriptor:	1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellular retinoic acid-binding protein 2
Authors:	Jia, X, Geiger, J.H.
Deposit date:	2008-11-12
Release date:	2009-11-10
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Probing Wavelength Regulation with an Engineered Rhodopsin Mimic and a C15-Retinal Analogue Chempluschem, 77, 2012

3FA6

Crystal structure of the R132K:Y134F:R111L:L121D:T54V mutant of cellular retinoic acid-binding protein II complexed with C15-aldehyde (a retinal analog) at 1.54 angstrom resolution
Descriptor:	1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, Cellular retinoic acid-binding protein 2
Authors:	Jia, X, Geiger, J.H.
Deposit date:	2008-11-15
Release date:	2009-10-27
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.54 Å)
Cite:	Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes To be Published

3F9D

Crystal structure of the R132K:R111L:T54E mutant of cellular retinoic acid-binding protein II complexed with C15-aldehyde (a retinal analog) at 2.00 angstrom resolution
Descriptor:	1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, Cellular retinoic acid-binding protein 2
Authors:	Jia, X, Geiger, J.H.
Deposit date:	2008-11-13
Release date:	2009-10-27
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes To be Published

3D1J

Crystal Structure of E.coli GS mutant dmGS(C7S;C408S)
Descriptor:	Glycogen synthase
Authors:	Sheng, F, Geiger, J.H.
Deposit date:	2008-05-06
Release date:	2009-03-24
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase. J.Biol.Chem., 284, 2009

3COP

Crystal Structure of E.coli GS mutant E377A in complex with ADP and acceptor analogue HEPPSO
Descriptor:	(2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, ADENOSINE-5'-DIPHOSPHATE, Glycogen synthase, ...
Authors:	Sheng, F, Geiger, J.H.
Deposit date:	2008-03-28
Release date:	2009-03-24
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase. J.Biol.Chem., 284, 2009

7LHJ

Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15-cis-retinal
Descriptor:	ACETATE ION, GLYCEROL, RETINAL, ...
Authors:	Ehyaei, N, Geiger, J.H, Borhan, B.
Deposit date:	2021-01-25
Release date:	2021-02-10
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.26 Å)
Cite:	Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15cis- retinal To Be Published

7LHN

Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light
Descriptor:	GLYCEROL, RETINAL, Retinol-binding protein 2
Authors:	Ehyaei, N, Geiger, J.H, Borhan, B.
Deposit date:	2021-01-25
Release date:	2021-04-14
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.11 Å)
Cite:	Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light To Be Published

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Total results:	187
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Geiger, J"