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PDB: 187 件
4EAT
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BU of 4eat by Molmil
Crystal structure of a benzoate coenzyme A ligase
分子名称: 1,2-ETHANEDIOL, BENZOIC ACID, Benzoate-coenzyme A ligase, ...
著者Geiger, J, Strom, S.
登録日2012-03-22
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
3UNV
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BU of 3unv by Molmil
Pantoea agglomerans Phenylalanine Aminomutase
分子名称: (3S)-3-amino-3-phenylpropanoic acid, 1,2-ETHANEDIOL, AdmH, ...
著者Geiger, J, Strom, S.
登録日2011-11-16
公開日2012-02-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Insights into the mechanistic pathway of the Pantoea agglomerans phenylalanine aminomutase.
Angew.Chem.Int.Ed.Engl., 51, 2012
6E6L
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BU of 6e6l by Molmil
Crystal structure of the holo retinal-bound domain-swapped dimer Q108K:K40L:T51F:Y60A mutant of human cellular retinol binding protein II
分子名称: ACETATE ION, RETINAL, Retinol-binding protein 2
著者Ghanbarpour, A, Geiger, J.
登録日2018-07-25
公開日2019-10-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019
7MFX
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BU of 7mfx by Molmil
The Crystal Structure of Q108K:K40H:T53A:R58L:Q38F:Q4F Mutant of HCRBPII Bound with FR1 Chromophore Showing Excited State Intermolecular Proton Transfer
分子名称: (4aP)-N,N-diethyl-9,9-dimethyl-7-[(1E)-prop-1-en-1-yl]-9H-fluoren-2-amine, GLYCEROL, Retinol-binding protein 2
著者Ghanbarpour, A, Geiger, J.
登録日2021-04-11
公開日2022-01-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase.
J.Am.Chem.Soc., 143, 2021
7ML5
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BU of 7ml5 by Molmil
Structure of the Starch Branching Enzyme I (BEI) complexed with maltododecaose from Oryza sativa L
分子名称: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Nayebi Gavgani, H, Fawaz, R, Geiger, J.H.
登録日2021-04-27
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A structural explanation for the mechanism and specificity of plant branching enzymes I and IIb.
J.Biol.Chem., 298, 2021
8SDB
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BU of 8sdb by Molmil
Crystal Structure of E.Coli Branching Enzyme in complex with malto-octose
分子名称: 1,4-alpha-glucan branching enzyme GlgB, alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Bingham, C.R, Nayebi, H, Fawaz, R, Geiger, J.H.
登録日2023-04-06
公開日2023-07-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Structure of Maltooctaose-Bound Escherichia coli Branching Enzyme Suggests a Mechanism for Donor Chain Specificity.
Molecules, 28, 2023
6ON7
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BU of 6on7 by Molmil
Crystal Structure of Apo Domain-Swapped Dimer Q108K:T51D:A28C:L36C Mutant of Human Cellular Retinol Binding Protein II
分子名称: Retinol-binding protein 2
著者Ghanbarpour, A, Geiger, J.
登録日2019-04-20
公開日2019-10-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019
8DN1
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BU of 8dn1 by Molmil
Q108K:K40L:T51C:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V at pH 7.2
分子名称: (2E)-3-[7-(diethylamino)-2-oxo-2H-1-benzopyran-3-yl]prop-2-enal, bound form, GLYCEROL, ...
著者Bingham, C.R, Borhan, B, Geiger, J.H.
登録日2022-07-10
公開日2023-02-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins.
Analyst, 148, 2023
7MFZ
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BU of 7mfz by Molmil
The Crystal Structure of Domain-Swapped Trimer Q108K:K40D:T53A:R58L:Q38F:Q4F Mutant of HCRBPII Bound with LizFluor3 Chromophore Showing Excited State Intermolecular Proton Transfer
分子名称: 1-(4-{5-[(2E)-but-2-en-2-yl]thiophen-2-yl}phenyl)azetidine, ACETATE ION, GLYCEROL, ...
著者Ghanbarpour, A, Geiger, J.
登録日2021-04-12
公開日2022-01-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase.
J.Am.Chem.Soc., 143, 2021
7MFY
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BU of 7mfy by Molmil
The Crystal Structure of Q108K:K40L:T51V:T53S:R58W:Y19W:A33W:L117E Mutant of HCRBPII Bound with LizFluor
分子名称: 4-{5-[(2E)-but-2-en-2-yl]thiophen-2-yl}-N,N-dimethylaniline, ACETATE ION, GLYCEROL, ...
著者Ghanbarpour, A, Geiger, J.
登録日2021-04-12
公開日2022-01-12
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Design of Large Stokes Shift Fluorescent Proteins Based on Excited State Proton Transfer of an Engineered Photobase.
J.Am.Chem.Soc., 143, 2021
4EFG
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BU of 4efg by Molmil
Crystal Structure of the Q108K:K40L:T51V:T53C:Y19W:R58W:T29L Mutant of Cellular Retinol Binding Protein Type II in Complex with All-trans-Retinal at 1.58 Angstrom Resolution
分子名称: ACETATE ION, RETINAL, Retinol-binding protein 2
著者Nossoni, Z, Geiger, J.H.
登録日2012-03-29
公開日2012-12-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Tuning the electronic absorption of protein-embedded all-trans-retinal.
Science, 338, 2012
4EXZ
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BU of 4exz by Molmil
Crystal Structure of the Q108K:K40L Mutant of Cellular Retinol Binding Protein Type II in Complex with All-trans-Retinal at 1.7 Angstrom Resolution
分子名称: ACETATE ION, RETINAL, Retinol-binding protein 2
著者Nossoni, Z, Geiger, J.H.
登録日2012-05-01
公開日2012-12-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.608 Å)
主引用文献Tuning the electronic absorption of protein-embedded all-trans-retinal.
Science, 338, 2012
3GUH
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BU of 3guh by Molmil
Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM
分子名称: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 1,5-anhydro-D-glucitol, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
著者Sheng, F, Geiger, J.
登録日2009-03-30
公開日2009-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase.
J.Biol.Chem., 284, 2009
7MS9
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BU of 7ms9 by Molmil
Crystal structure of E114D mutant of Cg10062 with a covalent intermediate of the hydration of acetylenecarboxylic acid
分子名称: 3-HYDROXY-PROPANOIC ACID, 4-oxalocrotonate tautomerase, SULFATE ION
著者Nayebi, G.H, Geiger, J.H, Draths, K.
登録日2021-05-10
公開日2022-02-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cg10062 Catalysis Forges a Link between Acetylenecarboxylic Acid and Bacterial Metabolism.
Biochemistry, 60, 2021
5U6G
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BU of 5u6g by Molmil
Crystal Structure of the holo Domain-Swapped Dimer mutant Q108K:K40D Human Cellular Retinol Binding Protein II bound with all trans retinal
分子名称: RETINAL, Retinol-binding protein 2
著者Assar, Z, Geiger, J.H.
登録日2016-12-08
公開日2017-10-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the holo Domain-Swapped Dimer mutant Q108K:K40D Human Cellular Retinol Binding Protein II bound with all trans retinal
To Be Published
2QZS
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BU of 2qzs by Molmil
Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb)
分子名称: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, ADENOSINE-5'-DIPHOSPHATE, alpha-D-glucopyranose, ...
著者Sheng, F, Geiger, J.
登録日2007-08-17
公開日2008-09-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase.
J.Biol.Chem., 284, 2009
2R4U
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BU of 2r4u by Molmil
Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd)
分子名称: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ADENOSINE-5'-DIPHOSPHATE, ...
著者Sheng, F, Geiger, J.
登録日2007-09-01
公開日2008-09-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.367 Å)
主引用文献The crystal structures of the open and catalytically competent closed conformation of Escherichia coli glycogen synthase.
J.Biol.Chem., 284, 2009
2R4T
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BU of 2r4t by Molmil
Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc)
分子名称: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ADENOSINE-5'-DIPHOSPHATE, ...
著者Sheng, F, Geiger, J.
登録日2007-09-01
公開日2008-09-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.258 Å)
主引用文献The crystal structures of the open and catalytically competent closed conformation of Escherichia coli glycogen synthase.
J.Biol.Chem., 284, 2009
4YKO
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BU of 4yko by Molmil
Crystal structure of the R111K:Y134F:T54V:R132Q:P39Q:R59Y:A32Y:F3Q mutant of human Cellular Retinoic Acid Binding Protein II with Retinal at 1.58 angstrom resolution
分子名称: Cellular retinoic acid-binding protein 2, RETINAL
著者Nosrati, M, Geiger, J.
登録日2015-03-04
公開日2016-03-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献A Photoisomerizing Rhodopsin Mimic Observed at Atomic Resolution.
J.Am.Chem.Soc., 138, 2016
1RM1
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BU of 1rm1 by Molmil
Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
分子名称: 5'-D(*AP*TP*CP*GP*AP*TP*CP*GP*AP*TP*AP*TP*AP*AP*AP*AP*CP*G)-3', 5'-D(P*CP*GP*TP*TP*TP*TP*AP*TP*AP*TP*CP*GP*AP*TP*CP*GP*AP*T)-3', TATA-box binding protein, ...
著者Jin, X, Gewirth, D.T, Geiger, J.H.
登録日2003-11-26
公開日2005-07-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献High Resolution Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
TO BE PUBLISHED
8VZZ
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BU of 8vzz by Molmil
Q108K:K40L:T51V:T53S:Y19W:R58W mutant of hCRBPII bound to synthetic fluorophore TD-1V
分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2
著者Nosssoni, Z, Bingham, C.R, Geiger, J.H, Borhan, B.
登録日2024-02-13
公開日2024-04-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Regulation of Absorption and Emission in a Protein/Fluorophore Complex.
Acs Chem.Biol., 19, 2024
8VZX
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BU of 8vzx by Molmil
Q108K:K40L:T53A:R58F mutant of hCRBPII bound to synthetic fluorophore TD-1V
分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2
著者Nossoni, Z, Bingham, C.R, Geiger, J.H.
登録日2024-02-13
公開日2024-04-03
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Regulation of Absorption and Emission in a Protein/Fluorophore Complex.
Acs Chem.Biol., 19, 2024
8D6H
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BU of 8d6h by Molmil
Q108K:K40L:T51C:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V after UV irradiation
分子名称: (2E)-3-[7-(diethylamino)-2-oxo-2H-1-benzopyran-3-yl]prop-2-enal, bound form, ACETATE ION, ...
著者Bingham, C.R, Geiger, J.H, Borhan, B.
登録日2022-06-06
公開日2023-02-01
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins.
Analyst, 148, 2023
8D6N
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BU of 8d6n by Molmil
Q108K:K40L:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V
分子名称: (2E)-3-[7-(diethylamino)-2-oxo-2H-1-benzopyran-3-yl]prop-2-enal, bound form, ACETATE ION, ...
著者Bingham, C.R, Geiger, J.H, Borhan, B.
登録日2022-06-06
公開日2023-02-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins.
Analyst, 148, 2023
1RM0
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Crystal Structure of Myo-Inositol 1-Phosphate Synthase From Saccharomyces cerevisiae In Complex With NAD+ and 2-deoxy-D-glucitol 6-(E)-vinylhomophosphonate
分子名称: (3,4,5,7-TETRAHYDROXY-HEPT-1-ENYL)-PHOSPHONIC ACID, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ...
著者Jin, X, Foley, K.M, Geiger, J.H.
登録日2003-11-26
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of the 1L-myo-inositol-1-phosphate synthase-NAD+-2-deoxy-D-glucitol 6-(E)-vinylhomophosphonate complex demands a revision of the enzyme mechanism.
J.Biol.Chem., 279, 2004

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