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PDB: 160 件
5TDC
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BU of 5tdc by Molmil
Crystal structure of the human UBR-box domain from UBR1 in complex with monomethylated arginine peptide.
分子名称: E3 ubiquitin-protein ligase UBR1, NMM-ILE-PHE-SER peptide, SULFATE ION, ...
著者Kozlov, G, Munoz-Escobar, J, Matta-Camacho, E, Gehring, K.
登録日2016-09-19
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.607 Å)
主引用文献Bound Waters Mediate Binding of Diverse Substrates to a Ubiquitin Ligase.
Structure, 25, 2017
1ME0
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BU of 1me0 by Molmil
Chimeric hairpin with 2',5'-linked RNA loop and DNA stem
分子名称: DNA/RNA (5'-D(*GP*GP*AP*C)-R(P*(U25)P*(U25)P*(C25)P*(5GP))-D(P*GP*TP*CP*C)-3')
著者Denisov, A.Y, Hannoush, R.N, Gehring, K, Damha, M.J.
登録日2002-08-07
公開日2003-08-19
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Novel RNA Motif Based on the Structure of Unusually Stable 2',5'-Linked r(UUCG) Loops
J.AM.CHEM.SOC., 125, 2003
1NEE
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BU of 1nee by Molmil
Structure of archaeal translation factor aIF2beta from Methanobacterium thermoautrophicum
分子名称: Probable translation initiation factor 2 beta subunit, ZINC ION
著者Gutierrez, P, Trempe, J.F, Siddiqui, N, Arrowsmith, C, Gehring, K.
登録日2002-12-11
公開日2004-03-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the archaeal translation initiation factor aIF2beta from Methanobacterium thermoautotrophicum: Implications for translation initiation.
Protein Sci., 13, 2004
1NMR
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BU of 1nmr by Molmil
Solution Structure of C-terminal Domain from Trypanosoma cruzi Poly(A)-Binding Protein
分子名称: poly(A)-binding protein
著者Siddiqui, N, Kozlov, G, D'Orso, I, Trempe, J.F, Frasch, A.C.C, Gehring, K.
登録日2003-01-10
公開日2003-09-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the C-terminal Domain from poly(A)-binding protein in Trypanosoma cruzi: A vegetal PABC domain
Protein Sci., 12, 2003
1P9K
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BU of 1p9k by Molmil
THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING
分子名称: orf, hypothetical protein
著者Volpon, L, Lievre, C, Osborne, M.J, Gandhi, S, Iannuzzi, P, Larocque, R, Matte, A, Cygler, M, Gehring, K, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2003-05-12
公開日2003-11-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The solution structure of YbcJ from Escherichia coli reveals a recently discovered alphaL motif involved in RNA binding.
J.Bacteriol., 185, 2003
5K34
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BU of 5k34 by Molmil
Structure of the ankyrin domain of AnkB from Legionella Pneumophila
分子名称: Ankyrin-repeat protein B, GLYCEROL, SULFATE ION
著者Wong, K, Kozlov, G, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2016-05-19
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural Mimicry by a Bacterial F Box Effector Hijacks the Host Ubiquitin-Proteasome System.
Structure, 25, 2017
2QHO
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BU of 2qho by Molmil
Crystal structure of the UBA domain from EDD ubiquitin ligase in complex with ubiquitin
分子名称: E3 ubiquitin-protein ligase EDD1, Ubiquitin
著者Kozlov, G, Gehring, K.
登録日2007-07-02
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis of ubiquitin recognition by the ubiquitin-associated (UBA) domain of the ubiquitin ligase EDD.
J.Biol.Chem., 282, 2007
5KDG
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BU of 5kdg by Molmil
Crystal Structure of Salmonella Typhimurium Effector GtgE
分子名称: GLYCEROL, Gifsy-2 prophage protein, SULFATE ION
著者Kozlov, G, Xu, C, Wong, K, Gehring, K, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2016-06-08
公開日2016-11-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal Structure of the Salmonella Typhimurium Effector GtgE.
PLoS ONE, 11, 2016
1ZY3
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BU of 1zy3 by Molmil
Structural model of complex of Bcl-w protein with Bid BH3-peptide
分子名称: Apoptosis regulator Bcl-W, BH3-peptide from BH3 interacting domain death agonist protein
著者Denisov, A.Y, Gehring, K.
登録日2005-06-09
公開日2006-02-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Model of the BCL-w-BID Peptide Complex and Its Interactions with Phospholipid Micelles.
Biochemistry, 45, 2006
5K35
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BU of 5k35 by Molmil
Structure of the Legionella effector, AnkB, in complex with human Skp1
分子名称: Ankyrin-repeat protein B, S-phase kinase-associated protein 1
著者Wong, K, Kozlov, G, Gehring, K, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2016-05-19
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural Mimicry by a Bacterial F Box Effector Hijacks the Host Ubiquitin-Proteasome System.
Structure, 25, 2017
2X5N
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BU of 2x5n by Molmil
Crystal Structure of the SpRpn10 VWA domain
分子名称: 26S PROTEASOME REGULATORY SUBUNIT RPN10, SULFATE ION
著者Riedinger, C, Boehringer, J, Trempe, J.-F, Lowe, E.D, Brown, N.R, Gehring, K, Noble, M.E.M, Gordon, C, Endicott, J.A.
登録日2010-02-10
公開日2010-08-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The Structure of Rpn10 and its Interactions with Polyubiquitin Chains and the Proteasome Subunit Rpn12.
J.Biol.Chem., 285, 2010
6DJ3
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BU of 6dj3 by Molmil
Crystal structure of CNNM2 cyclic nucleotide-binding homology domain
分子名称: 1,2-ETHANEDIOL, Metal transporter CNNM2
著者Chen, Y.S, Gehring, K.
登録日2018-05-24
公開日2018-10-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+efflux activity.
J. Biol. Chem., 293, 2018
6DJW
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BU of 6djw by Molmil
Crystal Structure of pParkin (REP and RING2 deleted)-pUb-UbcH7 complex
分子名称: RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
著者Sauve, V, Sung, G, Trempe, J.F, Gehring, K.
登録日2018-05-26
公開日2018-07-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.801 Å)
主引用文献Mechanism of parkin activation by phosphorylation.
Nat. Struct. Mol. Biol., 25, 2018
6DFD
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BU of 6dfd by Molmil
Crystal structure of CNNM3 cyclic nucleotide-binding homology domain
分子名称: Metal transporter CNNM3
著者Kozlov, G, Gehring, K.
登録日2018-05-14
公開日2018-10-31
最終更新日2019-01-16
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+efflux activity.
J. Biol. Chem., 293, 2018
6DJX
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BU of 6djx by Molmil
Crystal Structure of pParkin-pUb-UbcH7 complex
分子名称: RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
著者Sauve, V, Sung, G, Trempe, J.F, Gehring, K.
登録日2018-05-27
公開日2018-07-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.801 Å)
主引用文献Mechanism of parkin activation by phosphorylation.
Nat. Struct. Mol. Biol., 25, 2018
4JU5
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BU of 4ju5 by Molmil
Crystal structure of the dimeric form of the bb' domains of human protein disulfide isomerase
分子名称: Protein disulfide-isomerase
著者Bastos-Aristizabal, S, Kozlov, G, Gehring, K.
登録日2013-03-24
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural insight into the dimerization of human protein disulfide isomerase.
Protein Sci., 23, 2014
4JRD
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BU of 4jrd by Molmil
Crystal structure of the parallel double-stranded helix of poly(A) RNA
分子名称: AMMONIUM ION, RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
著者Safaee, N, Noronha, A.M, Kozlov, G, Rodionov, D, Wilds, C.J, Sheldrick, G.M, Gehring, K.
登録日2013-03-21
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structure of the parallel duplex of poly(A) RNA: evaluation of a 50 year-old prediction.
Angew.Chem.Int.Ed.Engl., 52, 2013
5KES
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BU of 5kes by Molmil
Solution structure of the yeast Ddi1 HDD domain
分子名称: DNA damage-inducible protein 1
著者Trempe, J.-F, Ratcliffe, C, Veverka, V, Saskova, K, Gehring, K.
登録日2016-06-10
公開日2016-10-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
7SOR
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BU of 7sor by Molmil
LaM domain of human LARP1 in complex with AAA RNA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Isoform 2 of La-related protein 1, ...
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOT
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BU of 7sot by Molmil
LaM domain of human LARP1 in complex with AAAAAA oligonucleotide
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), SULFATE ION
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOP
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BU of 7sop by Molmil
LaM domain of human LARP1 in complex with AAAUAA RNA
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*UP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOV
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BU of 7sov by Molmil
LaM domain of human LARP1 in complex with AAAAAAAAAAA RNA polynucleotide
分子名称: GLYCEROL, Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOU
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BU of 7sou by Molmil
LaM domain of human LARP1 in complex with AAAAAA polynucleotide
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOO
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BU of 7soo by Molmil
LaM domain of human LARP1
分子名称: Isoform 2 of La-related protein 1, SODIUM ION, SULFATE ION
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOQ
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BU of 7soq by Molmil
LaM domain of human LARP1 in complex with AAA RNA
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(*AP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022

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