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PDB: 49 results
3E9W
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BU of 3e9w by Molmil
X-Ray Crystal Structure of the hexamer DCACACG:Crystal grown in the presence of cobalt(III)hexammine Chloride.
Descriptor: 5'-D(*CP*AP*CP*AP*CP*G)-3', 5'-D(*CP*GP*TP*GP*TP*G)-3'
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2008-08-24
Release date:2008-09-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of d(CACACG).d(CGTGTG).
Acta Crystallogr.,Sect.F, 65, 2009
3Q5C
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BU of 3q5c by Molmil
Crystal structure of four-way junction with sticky end
Descriptor: DNA (5'-D(*CP*GP*GP*CP*GP*GP*CP*CP*GP*C)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2010-12-28
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:The sequence d(CGGCGGCCGC) self-assembles into a two dimensional rhombic DNA lattice
Biochem.Biophys.Res.Commun., 407, 2011
3R86
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BU of 3r86 by Molmil
Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex grown with 5 mM CoCl2
Descriptor: COBALT (II) ION, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2011-03-23
Release date:2011-04-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex
To be Published
3QK4
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BU of 3qk4 by Molmil
Crystal structure of d(CGCGGGTACCCGCG)2 as A-DNA duplex
Descriptor: DNA (5'-D(*CP*GP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*CP*G)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2011-01-31
Release date:2011-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of a full turn of an A-DNA duplex d(CGCGGGTACCCGCG)(2)
Biochem.Biophys.Res.Commun., 407, 2011
4EZ2
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BU of 4ez2 by Molmil
Crystal Structure of d(CCGGGACCGG)4 as a four-way junction at 1.6 angstrom resolution
Descriptor: 5'-D(*CP*CP*GP*GP*GP*AP*CP*CP*GP*G)-3', SODIUM ION
Authors:Chakraborty, A, Mandal, P.K, Gautham, N.
Deposit date:2012-05-02
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of d(CCGGGACCGG)(4) as a four-way junction at 1.6 A resolution: new insights into solvent interactions.
Acta Crystallogr.,Sect.F, 68, 2012
4DY8
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BU of 4dy8 by Molmil
Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex
Descriptor: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3'), DNA (5'-D(P*TP*G)-3'), ...
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-02-28
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Interactions of Mn(2+) with a non-self-complementary Z-type DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
4E2R
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BU of 4e2r by Molmil
Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
Descriptor: BARIUM ION, DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-03-09
Release date:2013-03-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
To be Published
4E60
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BU of 4e60 by Molmil
Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
Descriptor: BARIUM ION, DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3'), ...
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-03-15
Release date:2013-03-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
To be Published
4E4O
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BU of 4e4o by Molmil
Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
Descriptor: BARIUM ION, DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-03-13
Release date:2013-03-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex
To be Published
3FQB
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BU of 3fqb by Molmil
Barium interactions with Z-DNA
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3', BARIUM ION
Authors:Mandal, P.K, Venkadesh, S, Vinayak, N, Gautham, N.
Deposit date:2009-01-07
Release date:2009-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Barium-DNA interactions
To be published
3TCI
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BU of 3tci by Molmil
Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
Descriptor: DNA (5'-D(P*CP*GP*GP*GP*CP*GP*CP*CP*CP*G)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2011-08-09
Release date:2011-10-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.421 Å)
Cite:Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
To be Published
3T8P
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BU of 3t8p by Molmil
Crystal structure of d(CGGGTACCCG)4 as a four-way Holliday junction
Descriptor: CALCIUM ION, DNA (5'-D(*CP*GP*GP*GP*TP*AP*CP*CP*CP*G)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-08-01
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of d(CGGGTACCCG)(4) as a four-way Holliday junction
Acta Crystallogr.,Sect.F, 67, 2011
3V9D
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BU of 3v9d by Molmil
Crystal structure of the tetra-decanucleotide d(CCCCGGTACCGGGG)2 as an A-DNA duplex
Descriptor: DNA (5'-D(*CP*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*GP*G)-3'), MANGANESE (II) ION
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-12-26
Release date:2012-04-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the tetradecanucleotide d(CCCCGGTACCGGGG)2 as an A-DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
3UM4
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BU of 3um4 by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (i) Hexagonal plates
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-12
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3ULN
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BU of 3uln by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (iii) Hexagonal plates with intense spots and a depression
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-11
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3ULM
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BU of 3ulm by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (ii) Hexagonal plates with spots
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-11
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3ULO
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BU of 3ulo by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (iv) Hexagonal rings
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-11
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3G2R
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BU of 3g2r by Molmil
Crystal structure of d(CACGCG).d(CGCGTG) cocrystallized with MnCl2
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 5'-D(*CP*GP*TP*GP*CP*G)-3', MANGANESE (II) ION
Authors:Venkadesh, S, Mandal, P.K, Kannan, R, Gautham, N.
Deposit date:2009-02-01
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal studies of d(CACGCG).d(CGCGTG) grown with various counter ions
To be Published
3G2A
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BU of 3g2a by Molmil
Crystal structure of d(CACGCG).d(CGCGTG) grown in presence of 1mM MnCl2
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3'
Authors:Venkadesh, S, Mandal, P.K, Kannan, R, Gautham, N.
Deposit date:2009-01-31
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of d(CACGCG).d(CGCGTG) cocrystallized with MnCl2
To be Published
3HS1
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BU of 3hs1 by Molmil
Structure of Holliday junction formed by d(CCGGTACCGG); Crystal grown with CoCl2
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3'
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2009-06-10
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of Holliday junction
To be Published
3HQE
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BU of 3hqe by Molmil
Crystal Structure of the decamer CGGGCGCCCG forming a Holliday junction
Descriptor: 5'-D(*CP*GP*GP*GP*CP*GP*CP*CP*CP*G)-3'
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2009-06-06
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Sequence dependent structural variation of Holliday junction - crystal structure of d(CGGGCGCCCG)4
To be Published
3IXN
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BU of 3ixn by Molmil
Crystal structure of d(CCGGTACCGG) as B-DNA duplex
Descriptor: COBALT (II) ION, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
Authors:Venkadesh, S, Mandal, P.K, Gautham, N.
Deposit date:2009-09-04
Release date:2010-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Crystal Structure of inverted repeat sequence d(CCGGTACCGG)as B-DNA duplex
To be Published
3GDA
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BU of 3gda by Molmil
Crystal study of d(CACGCG).d(CGCGTG) grwon in presence of stannous chloride
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3'
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2009-02-23
Release date:2009-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of d(CACGCG).d(CGCGTG) grown in presence of SnCl2
To be Published
3GCY
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BU of 3gcy by Molmil
Crystal studies of d(CACGCG).d(CGCGTG) grown in presence of calcium chloride
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3'
Authors:Mandal, P.K, Venkadesh, S, Nandini, M, Gautham, N.
Deposit date:2009-02-23
Release date:2009-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal studies of d(CACGCG).d(CGCGTG) grown with various metal ions
To be Published
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