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PDB: 64 件

7E71
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Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin: 1 ms structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Archaeal-type opsin 1,Archaeal-type opsin 2, ...
著者Oda, K, Nomura, T, Nakane, T, Yamashita, K, Inoue, K, Ito, S, Vierock, J, Hirata, K, Maturana, A.D, Katayama, K, Ikuta, T, Ishigami, I, Izume, T, Umeda, R, Eguma, R, Oishi, S, Kasuya, G, Kato, T, Kusakizako, T, Shihoya, W, Shimada, H, Takatsuji, T, Takemoto, M, Taniguchi, R, Tomita, A, Nakamura, R, Fukuda, M, Miyauchi, H, Lee, Y, Nango, E, Tanaka, R, Tanaka, T, Sugahara, M, Kimura, T, Shimamura, T, Fujiwara, T, Yamanaka, Y, Owada, S, Joti, Y, Tono, K, Ishitani, R, Hayashi, S, Kandori, H, Hegemann, P, Iwata, S, Kubo, M, Nishizawa, T, Nureki, O.
登録日2021-02-24
公開日2021-04-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin.
Elife, 10, 2021
7E70
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Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin: 250 microsecond structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Archaeal-type opsin 1,Archaeal-type opsin 2, ...
著者Oda, K, Nomura, T, Nakane, T, Yamashita, K, Inoue, K, Ito, S, Vierock, J, Hirata, K, Maturana, A.D, Katayama, K, Ikuta, T, Ishigami, I, Izume, T, Umeda, R, Eguma, R, Oishi, S, Kasuya, G, Kato, T, Kusakizako, T, Shihoya, W, Shimada, H, Takatsuji, T, Takemoto, M, Taniguchi, R, Tomita, A, Nakamura, R, Fukuda, M, Miyauchi, H, Lee, Y, Nango, E, Tanaka, R, Tanaka, T, Sugahara, M, Kimura, T, Shimamura, T, Fujiwara, T, Yamanaka, Y, Owada, S, Joti, Y, Tono, K, Ishitani, R, Hayashi, S, Kandori, H, Hegemann, P, Iwata, S, Kubo, M, Nishizawa, T, Nureki, O.
登録日2021-02-24
公開日2021-04-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin.
Elife, 10, 2021
7C86
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Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin: Dark state structure
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RETINAL, ...
著者Oda, K, Nomura, T, Nakane, T, Yamashita, K, Inoue, K, Ito, S, Vierock, J, Hirata, K, Maturana, A.D, Katayama, K, Ikuta, T, Ishigami, I, Izume, T, Umeda, R, Eguma, R, Oishi, S, Kasuya, G, Kato, T, Kusakizako, T, Shihoya, W, Shimada, H, Takatsuji, T, Takemoto, M, Taniguchi, R, Tomita, A, Nakamura, R, Fukuda, M, Miyauchi, H, Lee, Y, Nango, E, Tanaka, R, Tanaka, T, Sugahara, M, Kimura, T, Shimamura, T, Fujiwara, T, Yamanaka, Y, Owada, S, Joti, Y, Tono, K, Ishitani, R, Hayashi, S, Kandori, H, Hegemann, P, Iwata, S, Kubo, M, Nishizawa, T, Nureki, O.
登録日2020-05-28
公開日2021-04-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin.
Elife, 10, 2021
7BQQ
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Solution NMR structure of fold-Z Gogy; de novo designed protein with an asymmetric all-alpha topology
分子名称: Gogy
著者Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
登録日2020-03-25
公開日2021-04-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQM
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Solution NMR structure of fold-0 Chantal; de novo designed protein with an asymmetric all-alpha topology
分子名称: Chantal
著者Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
登録日2020-03-25
公開日2021-04-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQN
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BU of 7bqn by Molmil
Solution NMR structure of fold-C Rei; de novo designed protein with an asymmetric all-alpha topology
分子名称: Rei
著者Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
登録日2020-03-25
公開日2021-04-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQE
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BU of 7bqe by Molmil
Solution NMR structure of NF3; de novo designed protein with a novel fold
分子名称: NF3
著者Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
登録日2020-03-24
公開日2021-03-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
3VLM
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BU of 3vlm by Molmil
Crystal Structure Analysis of the Met244Ala Variant of KatG from Haloarcula marismortui
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sato, T, Ten-i, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal Structure and Kinetic Studies on Met244Ala Variant of KatG from HALOARCULA MARISMORTUI
To be Published
3VLI
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BU of 3vli by Molmil
Crystal Structure Analysis of the Cyanide Arg409Leu Variant KatG from HALOARCULA MARISMORTUI
分子名称: CYANIDE ION, Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sato, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures and Peroxidatic Function of Cyanide Arg409Leu Variant and its Complexes with o-Dianisidine in KatG from HALOARCULA MARISMORTUI
To be Published
3VLJ
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BU of 3vlj by Molmil
Crystal Structure Analysis of the Cyanide Arg409Leu Variant Complexes with o-Dianisidine in KatG from HALOARCULA MARISMORTUI
分子名称: 3,3'-dimethoxybiphenyl-4,4'-diamine, CYANIDE ION, Catalase-peroxidase 2, ...
著者Sato, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structures and Peroxidatic Function of Cyanide Arg409Leu Variant and its Complexes with o-Dianisidine in KatG from HALOARCULA MARISMORTUI
To be Published
3VLK
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BU of 3vlk by Molmil
Crystal Structure Analysis of the Ser305Ala variant of KatG from Haloarcula marismortui
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sato, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure and Kinetics Studies on Ser305Ala variant of KatG from HALOARCULA MARISMORTUI and its Complexes with Inhibitor SHA
To be Published
3VLL
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Crystal Structure Analysis of the Ser305Ala variant of KatG from HALOARCULA MARISMORTUI Complexes with Inhibitor SHA
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE, SALICYLHYDROXAMIC ACID
著者Sato, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure and Kinetics Studies on Ser305Ala variant of KatG from HALOARCULA MARISMORTUI and its Complexes with Inhibitor SHA
To be Published
3UW8
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BU of 3uw8 by Molmil
Crystal Structure Analysis of the Ser305Thr Variants of KatG from Haloarcula marismortui
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sato, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Catalatic Implication Guided by Structure, Kinetics and Theoretical Studies on Ser305Thr and Arg409Leu Variants of HmKatG
To be Published
3VLH
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BU of 3vlh by Molmil
Crystal Structure Analysis of the Arg409Leu Variants of KatG from HALOARCULA MARISMORTUI
分子名称: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
著者Sato, T, Higuchi, W, Yoshimatsu, K, Fujiwara, T.
登録日2011-12-01
公開日2012-12-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Catalatic Implication Guided by Structure, Kinetics and Theoretical Studies on Ser305Thr and Arg409Leu Variants of HmKatG
To be Published
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件を2024-10-30に公開中

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