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PDB: 82 results

2NVB
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BU of 2nvb by Molmil
Contribution of Pro275 to the Thermostability of the Alcohol Dehydrogenases (ADHs)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent alcohol dehydrogenase, ZINC ION
Authors:Goihberg, E, Tel-Or, S, Peretz, M, Frolow, F, Dym, O, Burstein, Y, Israel Structural Proteomics Center (ISPC)
Deposit date:2006-11-12
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Thermal stabilization of the protozoan Entamoeba histolytica alcohol dehydrogenase by a single proline substitution
Proteins, 72, 2008
6ZOI
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A lid blocking mechanism of a cone snail toxin revealed at the atomic level
Descriptor: Conknunitzin-C3 mutante
Authors:Saikia, C, Altman-Gueta, H, Dym, O, Frolow, F, Gurevitz, M, Gordon, D, Reuveny, E, Karbat, I.
Deposit date:2020-07-07
Release date:2021-07-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:A lid blocking mechanism of a cone snail toxin revealed at the atomic level
To Be Published
2D95
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BU of 2d95 by Molmil
LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC)
Descriptor: DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3')
Authors:Eisenstein, M, Hope, H, Haran, T.E, Frolow, F, Shakked, Z, Rabinovich, D.
Deposit date:1993-07-13
Release date:1994-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Low-temperature study of the A-DNA fragment d(GGGCGCCC)
ACTA CRYSTALLOGR.,SECT.B, 44, 1988
1PED
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BACTERIAL SECONDARY ALCOHOL DEHYDROGENASE (APO-FORM)
Descriptor: NADP-DEPENDENT ALCOHOL DEHYDROGENASE, ZINC ION
Authors:Korkhin, Y, Frolow, F.
Deposit date:1995-12-28
Release date:1997-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystalline alcohol dehydrogenases from the mesophilic bacterium Clostridium beijerinckii and the thermophilic bacterium Thermoanaerobium brockii: preparation, characterization and molecular symmetry.
Acta Crystallogr.,Sect.D, 52, 1996
6Q6C
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Pore-modulating toxins exploit inherent slow inactivation to block K+ channels
Descriptor: 1,2-ETHANEDIOL, Kunitz-type conkunitzin-S1, NITRATE ION, ...
Authors:Karbat, I, Gueta, H, Fine, S, Szanto, T, Hamer-Rogotner, S, Dym, O, Frolow, F, Gordon, D, Panyi, G, Gurevitz, M, Reuveny, E.
Deposit date:2018-12-10
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Pore-modulating toxins exploit inherent slow inactivation to block K+channels.
Proc.Natl.Acad.Sci.USA, 116, 2019
6Q61
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Pore-modulating toxins exploit inherent slow inactivation to block K+ channels
Descriptor: Kunitz-type conkunitzin-S1, SULFATE ION
Authors:Karbat, I, Gueta, H, Fine, S, Szanto, T, Hamer-Rogotner, S, Dym, O, Frolow, F, Gordon, D, Panyi, G, Gurevitz, M, Reuveny, E.
Deposit date:2018-12-10
Release date:2019-08-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Pore-modulating toxins exploit inherent slow inactivation to block K+channels.
Proc.Natl.Acad.Sci.USA, 116, 2019
3ZQX
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BU of 3zqx by Molmil
Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
Descriptor: CALCIUM ION, CELLULOSE 1,4-BETA-CELLOBIOSIDASE
Authors:Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2011-06-12
Release date:2012-04-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module
Acta Crystallogr.,Sect.D, 68, 2012
3ZU8
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STRUCTURE OF CBM3B OF MAJOR SCAFFOLDIN SUBUNIT SCAA FROM ACETIVIBRIO CELLULOLYTICUS DETERMINED ON THE NIKEL ABSORPTION EDGE
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CELLULOSOMAL SCAFFOLDIN, ...
Authors:Yaniv, O, Halfon, Y, Lamed, R, Frolow, F.
Deposit date:2011-07-17
Release date:2012-01-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structure of Cbm3B of the Major Scaffoldin Subunit Scaa from Acetivibrio Cellulolyticus
Acta Crystallogr.,Sect.F, 68, 2012
1TYJ
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BU of 1tyj by Molmil
Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens
Descriptor: 1,2-ETHANEDIOL, METHANOL, cellulosomal scaffoldin
Authors:Noach, I, Frolow, F, Jakoby, H, Rosenheck, S, Shimon, L.J.W, Lamed, R, Bayer, E.A.
Deposit date:2004-07-08
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements
J.Mol.Biol., 348, 2005
1BFR
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BU of 1bfr by Molmil
IRON STORAGE AND ELECTRON TRANSPORT
Descriptor: BACTERIOFERRITIN, MANGANESE (II) ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Dautant, A, Yariv, J, Meyer, J.B, Precigoux, G, Sweet, R.M, Frolow, F, Kalb(Gilboa), A.J.
Deposit date:1994-12-16
Release date:1996-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of a monoclinic crystal from of cyctochrome b1 (Bacterioferritin) from E. coli.
Acta Crystallogr.,Sect.D, 54, 1998
4IPY
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BU of 4ipy by Molmil
HIV capsid C-terminal domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein p24
Authors:Lampel, A, Yaniv, O, Berger, O, Bachrach, E, Gazit, E, Frolow, F.
Deposit date:2013-01-10
Release date:2013-10-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A triclinic crystal structure of the carboxy-terminal domain of HIV-1 capsid protein with four molecules in the asymmetric unit reveals a novel packing interface.
Acta Crystallogr.,Sect.F, 69, 2013
1YKF
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BU of 1ykf by Molmil
NADP-DEPENDENT ALCOHOL DEHYDROGENASE FROM THERMOANAEROBIUM BROCKII
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-DEPENDENT ALCOHOL DEHYDROGENASE, ZINC ION
Authors:Korkhin, Y, Frolow, F.
Deposit date:1996-03-25
Release date:1998-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:NADP-dependent bacterial alcohol dehydrogenases: crystal structure, cofactor-binding and cofactor specificity of the ADHs of Clostridium beijerinckii and Thermoanaerobacter brockii.
J.Mol.Biol., 278, 1998
4JO5
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BU of 4jo5 by Molmil
CBM3a-L domain with flanking linkers from scaffoldin cipA of cellulosome of Clostridium thermocellum
Descriptor: 1-METHYLIMIDAZOLE, CALCIUM ION, CHLORIDE ION, ...
Authors:Shimon, L.J.W, Frolow, F, Bayer, E.A, Yaniv, O, Lamed, R, Morag, E.
Deposit date:2013-03-16
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of a family 3a carbohydrate-binding module from the cellulosomal scaffoldin CipA of Clostridium thermocellum with flanking linkers: implications for cellulosome structure.
Acta Crystallogr.,Sect.F, 69, 2013
1Y9A
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BU of 1y9a by Molmil
Alcohol Dehydrogenase from Entamoeba histolotica in complex with cacodylate
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CACODYLATE ION, ...
Authors:Shimon, L.J, Peretz, M, Goihberg, E, Burstein, Y, Frolow, F.
Deposit date:2004-12-15
Release date:2006-01-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of alcohol dehydrogenase from Entamoeba histolytica.
Acta Crystallogr.,Sect.D, 62, 2006
2ASC
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BU of 2asc by Molmil
Scorpion toxin LQH-alpha-IT
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, ETHANOL, ...
Authors:Kahn, R, Karbat, I, Gurevitz, M, Frolow, F.
Deposit date:2005-08-23
Release date:2006-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:X-ray structures of Lqh-alpha-IT and Lqh-alpha-IT8D9D10V mutant
To be Published
1ZV9
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BU of 1zv9 by Molmil
Crystal structure analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus- SeMet derivative
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, ACETIC ACID, ...
Authors:Noach, I, Rosenheck, S, Lamed, R, Shimon, L, Bayer, E, Frolow, F.
Deposit date:2005-06-01
Release date:2006-06-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Intermodular linker flexibility revealed from crystal structures of adjacent cellulosomal cohesins of Acetivibrio cellulolyticus.
J.Mol.Biol., 391, 2009
1ILC
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BU of 1ilc by Molmil
DNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.
Descriptor: 5'-D(*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*T)-3'
Authors:Hizver, J, Rozenberg, H, Frolow, F, Rabinovich, D, Shakked, Z.
Deposit date:2001-05-08
Release date:2002-05-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:DNA bending by an adenine--thymine tract and its role in gene regulation.
Proc.Natl.Acad.Sci.USA, 98, 2001
4IU2
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BU of 4iu2 by Molmil
Cohesin-dockerin -X domain complex from Ruminococcus flavefacience
Descriptor: CALCIUM ION, CHLORIDE ION, Cell-wall anchoring protein, ...
Authors:Salama-Alber, O, Bayer, E, Frolow, F.
Deposit date:2013-01-19
Release date:2013-04-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Atypical Cohesin-Dockerin Complex Responsible for Cell Surface Attachment of Cellulosomal Components: BINDING FIDELITY, PROMISCUITY, AND STRUCTURAL BUTTRESSES.
J.Biol.Chem., 288, 2013
4IU3
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BU of 4iu3 by Molmil
Cohesin-dockerin -X domain complex from Ruminococcus flavefacience
Descriptor: CALCIUM ION, Cell-wall anchoring protein, Cellulose-binding protein, ...
Authors:Salama-Alber, O, Bayer, E, Frolow, F.
Deposit date:2013-01-19
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Atypical Cohesin-Dockerin Complex Responsible for Cell Surface Attachment of Cellulosomal Components: BINDING FIDELITY, PROMISCUITY, AND STRUCTURAL BUTTRESSES.
J.Biol.Chem., 288, 2013
2XDH
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BU of 2xdh by Molmil
Non-cellulosomal cohesin from the hyperthermophilic archaeon Archaeoglobus fulgidus
Descriptor: CHLORIDE ION, COHESIN, MAGNESIUM ION, ...
Authors:Voronov-Goldman, M, Lamed, R, Noach, I, Borovok, I, Kwiat, M, Rosenheck, S, Shimon, L.J.W, Bayer, E.A, Frolow, F.
Deposit date:2010-05-02
Release date:2010-05-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Non-Cellulosomal Cohesin from the Hyperthermophilic Archaeon Archaeoglobus Fulgidus
Proteins, 79, 2011
1LLU
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BU of 1llu by Molmil
THE TERNARY COMPLEX OF PSEUDOMONAS AERUGINOSA ALCOHOL DEHYDROGENASE WITH ITS COENZYME AND WEAK SUBSTRATE
Descriptor: 1,2-ETHANEDIOL, Alcohol Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Levin, I, Meiri, G, Peretz, M, Frolow, F, Burstein, Y.
Deposit date:2002-04-30
Release date:2003-11-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The ternary complex of Pseudomonas aeruginosa alcohol dehydrogenase with NADH and ethylene glycol.
Protein Sci., 13, 2004
2D94
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THE CONFORMATION OF THE DNA DOUBLE HELIX IN THE CRYSTAL IS DEPENDENT ON ITS ENVIRONMENT
Descriptor: DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3')
Authors:Shakked, Z, Guerstein-Guzikevich, G, Eisenstein, M, Frolow, F, Rabinovich, D.
Deposit date:1993-07-13
Release date:1994-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The conformation of the DNA double helix in the crystal is dependent on its environment.
Nature, 342, 1989
2HOX
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alliinase from allium sativum (garlic)
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shimon, L.J.W, Rabinkov, A, Wilcheck, M, Mirelman, D, Frolow, F.
Deposit date:2006-07-17
Release date:2007-02-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Two Structures of Alliinase from Alliium sativum L.: Apo Form and Ternary Complex with Aminoacrylate Reaction Intermediate Covalently Bound to the PLP Cofactor.
J.Mol.Biol., 366, 2007
1LJM
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DNA recognition is mediated by conformational transition and by DNA bending
Descriptor: CHLORIDE ION, RUNX1 transcription factor
Authors:Bartfeld, D, Shimon, L, Couture, G.C, Rabinovich, D, Frolow, F, Levanon, D, Groner, Y, Shakked, Z.
Deposit date:2002-04-22
Release date:2002-11-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA Recognition by the RUNX1 Transcription Factor Is Mediated by an Allosteric Transition in the RUNT Domain and by DNA Bending.
Structure, 10
1D31
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THE THREE-DIMENSIONAL STRUCTURES OF BULGE-CONTAINING DNA FRAGMENTS
Descriptor: DNA (5'-D(*CP*GP*CP*AP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Joshua-Tor, L, Frolow, F, Appella, E, Hope, H, Rabinovich, D, Sussman, J.L.
Deposit date:1991-04-25
Release date:1992-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Three-dimensional structures of bulge-containing DNA fragments.
J.Mol.Biol., 225, 1992

226707

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